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Acral Melanoma PDXs from the admixed Brazilian Population - Tumour and unfiltered PDX sample CRAM files - Whole exome sequencing data

CRAM files containing the whole exome data for Tumours, and unfiltered Patient Derived Xenograft samples mapped to build GRCh38. Acral melanoma (AM) is an aggressive melanoma subtype with limited therapeutic options and poor outcomes. In non-European descent and admixed populations, like in Latin America, it can account for a significant proportion of cutaneous melanoma cases. Here, we performed comprehensive genomic and functional profiling of AM from a uniquely diverse Brazilian cohort. Whole-exome and transcriptome sequencing was performed on both tumours and patient-derived xenograft (PDX) samples. The PDX were obtained from a comprehensive collection of patient-derived xenograft (AM-PDX) models that we established which faithfully retained the histopathological and genomic features of the original tumours.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005663 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00008863932 cram 1.1 GB
EGAF00008863933 cram 941.0 MB
EGAF00008863934 cram 1.0 GB
EGAF00008863935 cram 910.9 MB
EGAF00008863936 cram 1.1 GB
EGAF00008863937 cram 1.2 GB
EGAF00008863938 cram 1.5 GB
EGAF00008863939 cram 1.2 GB
EGAF00008863940 cram 993.7 MB
EGAF00008863941 cram 1.1 GB
EGAF00008863942 cram 1.4 GB
EGAF00008863943 cram 1.0 GB
EGAF00008863944 cram 1.1 GB
EGAF00008863945 cram 1.0 GB
EGAF00008863946 cram 1.0 GB
EGAF00008863947 cram 1.2 GB
EGAF00008863948 cram 978.4 MB
EGAF00008863949 cram 981.5 MB
EGAF00008863950 cram 1.0 GB
EGAF00008863951 cram 1.1 GB
EGAF00008863952 cram 950.8 MB
EGAF00008863953 cram 1.2 GB
EGAF00008863954 cram 911.3 MB
EGAF00008863955 cram 1.1 GB
EGAF00008863956 cram 1.5 GB
EGAF00008863957 cram 1.0 GB
EGAF00008863958 cram 1.1 GB
EGAF00008863959 cram 906.3 MB
EGAF00008863960 cram 1.1 GB
EGAF00008863961 cram 887.0 MB
EGAF00008863962 cram 1.4 GB
EGAF00008863963 cram 1.0 GB
EGAF00008863964 cram 1.0 GB
EGAF00008863965 cram 835.9 MB
EGAF00008863966 cram 1.4 GB
EGAF00008863967 cram 912.0 MB
EGAF00008863968 cram 1.1 GB
EGAF00008863969 cram 1.1 GB
EGAF00008863970 cram 1.2 GB
EGAF00008863971 cram 970.5 MB
EGAF00008863972 cram 1.0 GB
EGAF00008863973 cram 1.5 GB
EGAF00008863974 cram 1.3 GB
EGAF00008863975 cram 1.2 GB
EGAF00008863976 cram 994.8 MB
EGAF00008863977 cram 948.2 MB
EGAF00008863978 cram 817.7 MB
EGAF00008863979 cram 1.1 GB
EGAF00008863980 cram 1.2 GB
EGAF00008863981 cram 1.1 GB
EGAF00008863982 cram 978.5 MB
EGAF00008863983 cram 1.0 GB
EGAF00008863984 cram 866.5 MB
EGAF00008863985 cram 1.1 GB
EGAF00008863986 cram 936.4 MB
EGAF00008863987 cram 1.0 GB
EGAF00008863988 cram 902.4 MB
EGAF00008863989 cram 1.1 GB
EGAF00008863990 cram 1.2 GB
EGAF00008863991 cram 1.4 GB
EGAF00008863992 cram 1.2 GB
EGAF00008863993 cram 986.0 MB
EGAF00008863994 cram 1.1 GB
EGAF00008863995 cram 1.3 GB
EGAF00008863996 cram 1.0 GB
EGAF00008863997 cram 1.1 GB
EGAF00008863998 cram 1.0 GB
EGAF00008863999 cram 1.0 GB
EGAF00008864000 cram 1.2 GB
EGAF00008864001 cram 966.6 MB
EGAF00008864002 cram 968.4 MB
EGAF00008864003 cram 998.3 MB
EGAF00008864004 cram 1.1 GB
EGAF00008864005 cram 947.0 MB
EGAF00008864006 cram 1.2 GB
EGAF00008864007 cram 900.8 MB
EGAF00008864008 cram 1.1 GB
EGAF00008864009 cram 1.5 GB
EGAF00008864010 cram 1.0 GB
EGAF00008864011 cram 1.1 GB
EGAF00008864012 cram 899.2 MB
EGAF00008864013 cram 1.1 GB
EGAF00008864014 cram 883.1 MB
EGAF00008864015 cram 1.3 GB
EGAF00008864016 cram 993.3 MB
EGAF00008864017 cram 1.0 GB
EGAF00008864018 cram 828.8 MB
EGAF00008864019 cram 1.5 GB
EGAF00008864020 cram 900.1 MB
EGAF00008864021 cram 1.4 GB
EGAF00008864022 cram 981.7 MB
EGAF00008864023 cram 1.4 GB
EGAF00008864024 cram 1.1 GB
EGAF00008864025 cram 1.5 GB
EGAF00008864026 cram 1.0 GB
EGAF00008864027 cram 1.3 GB
EGAF00008864028 cram 975.6 MB
EGAF00008864029 cram 1.2 GB
EGAF00008864030 cram 947.1 MB
EGAF00008864031 cram 951.7 MB
EGAF00008864032 cram 931.3 MB
EGAF00008864033 cram 1.1 GB
EGAF00008864034 cram 877.8 MB
EGAF00008864035 cram 1.1 GB
EGAF00008864036 cram 990.9 MB
EGAF00008864037 cram 1.1 GB
EGAF00008864038 cram 913.3 MB
EGAF00008864039 cram 930.7 MB
EGAF00008864040 cram 968.5 MB
EGAF00008864041 cram 1.2 GB
EGAF00008864042 cram 887.1 MB
EGAF00008864043 cram 723.0 MB
EGAF00008864044 cram 839.1 MB
EGAF00008864045 cram 817.6 MB
EGAF00008864046 cram 983.4 MB
EGAF00008864047 cram 928.9 MB
EGAF00008864048 cram 997.2 MB
EGAF00008864049 cram 910.4 MB
EGAF00008864050 cram 1.0 GB
EGAF00008864051 cram 991.4 MB
EGAF00008864052 cram 989.7 MB
EGAF00008864053 cram 1.2 GB
EGAF00008864054 cram 966.0 MB
EGAF00008864055 cram 871.8 MB
EGAF00008864056 cram 974.3 MB
EGAF00008864057 cram 1.4 GB
EGAF00008864058 cram 1.1 GB
EGAF00008864059 cram 969.9 MB
EGAF00008864060 cram 1.1 GB
EGAF00008864061 cram 997.7 MB
EGAF00008864062 cram 792.7 MB
EGAF00008864063 cram 595.9 MB
EGAF00008864064 cram 798.0 MB
EGAF00008864065 cram 919.2 MB
EGAF00008864066 cram 1.0 GB
EGAF00008864067 cram 881.2 MB
EGAF00008864068 cram 957.3 MB
EGAF00008864069 cram 870.0 MB
EGAF00008864070 cram 931.4 MB
EGAF00008864071 cram 1.2 GB
EGAF00008864072 cram 1.0 GB
EGAF00008864073 cram 943.4 MB
EGAF00008864074 cram 922.9 MB
EGAF00008864075 cram 995.4 MB
EGAF00008864076 cram 1.4 GB
EGAF00008864077 cram 946.8 MB
EGAF00008864078 cram 1.0 GB
EGAF00008864079 cram 823.7 MB
EGAF00008864080 cram 872.2 MB
EGAF00008864081 cram 905.9 MB
EGAF00008864082 cram 827.0 MB
EGAF00008864083 cram 976.1 MB
EGAF00008864084 cram 972.2 MB
EGAF00008864085 cram 1.4 GB
EGAF00008864086 cram 903.4 MB
EGAF00008864087 cram 1.1 GB
EGAF00008864088 cram 1.1 GB
EGAF00008864089 cram 1.2 GB
EGAF00008864090 cram 960.0 MB
EGAF00008864091 cram 1.0 GB
EGAF00008864092 cram 1.5 GB
EGAF00008864093 cram 1.2 GB
EGAF00008864094 cram 1.2 GB
EGAF00008864095 cram 988.0 MB
EGAF00008864096 cram 943.9 MB
EGAF00008864097 cram 813.3 MB
EGAF00008864098 cram 1.1 GB
EGAF00008864099 cram 1.1 GB
EGAF00008864100 cram 1.1 GB
EGAF00008864101 cram 968.8 MB
EGAF00008864102 cram 997.2 MB
EGAF00008864103 cram 859.5 MB
EGAF00008864104 cram 1.1 GB
EGAF00008864105 cram 933.9 MB
EGAF00008864106 cram 1.0 GB
EGAF00008864107 cram 891.4 MB
EGAF00008864108 cram 1.1 GB
EGAF00008864109 cram 1.2 GB
EGAF00008864110 cram 1.4 GB
EGAF00008864111 cram 1.2 GB
EGAF00008864112 cram 976.5 MB
EGAF00008864113 cram 1.1 GB
EGAF00008864114 cram 1.3 GB
EGAF00008864115 cram 1.0 GB
EGAF00008864116 cram 1.1 GB
EGAF00008864117 cram 1.0 GB
EGAF00008864118 cram 1.0 GB
EGAF00008864119 cram 1.2 GB
EGAF00008864120 cram 953.6 MB
EGAF00008864121 cram 952.0 MB
EGAF00008864122 cram 989.3 MB
EGAF00008864123 cram 1.1 GB
EGAF00008864124 cram 940.3 MB
EGAF00008864125 cram 1.2 GB
EGAF00008864126 cram 891.1 MB
EGAF00008864127 cram 1.0 GB
EGAF00008864128 cram 1.5 GB
EGAF00008864129 cram 995.3 MB
EGAF00008864130 cram 1.1 GB
EGAF00008864131 cram 894.5 MB
EGAF00008864132 cram 1.1 GB
EGAF00008864133 cram 878.7 MB
EGAF00008864134 cram 1.3 GB
EGAF00008888580 cram 1.0 GB
EGAF00008888581 cram 1.0 GB
EGAF00008888582 cram 850.1 MB
EGAF00008888583 cram 1.5 GB
EGAF00008888584 cram 918.7 MB
EGAF00008888585 cram 1.4 GB
EGAF00008888586 cram 997.8 MB
EGAF00008888587 cram 1.4 GB
EGAF00008888588 cram 1.2 GB
EGAF00008888589 cram 1.5 GB
EGAF00008888590 cram 1.1 GB
EGAF00008888591 cram 1.4 GB
EGAF00008888592 cram 1.0 GB
EGAF00008888593 cram 1.2 GB
EGAF00008888594 cram 966.6 MB
EGAF00008888595 cram 975.6 MB
EGAF00008888596 cram 971.2 MB
EGAF00008888597 cram 1.1 GB
EGAF00008888598 cram 898.4 MB
EGAF00008888599 cram 1.1 GB
EGAF00008888600 cram 1.0 GB
EGAF00008888601 cram 1.2 GB
EGAF00008888602 cram 922.1 MB
EGAF00008888603 cram 948.8 MB
EGAF00008888604 cram 976.2 MB
EGAF00008888605 cram 1.2 GB
EGAF00008888606 cram 910.8 MB
EGAF00008888607 cram 740.5 MB
EGAF00008888608 cram 852.9 MB
EGAF00008888609 cram 859.5 MB
EGAF00008888610 cram 1.0 GB
EGAF00008888611 cram 974.6 MB
EGAF00008888612 cram 1.0 GB
EGAF00008888613 cram 929.9 MB
EGAF00008888614 cram 1.0 GB
EGAF00008888615 cram 1.0 GB
EGAF00008888616 cram 1.0 GB
EGAF00008888617 cram 1.2 GB
EGAF00008888618 cram 987.5 MB
EGAF00008888619 cram 906.0 MB
EGAF00008888620 cram 983.4 MB
EGAF00008888621 cram 1.4 GB
EGAF00008888622 cram 1.1 GB
EGAF00008888623 cram 1.0 GB
EGAF00008888624 cram 1.1 GB
EGAF00008888625 cram 1.0 GB
EGAF00008888626 cram 817.3 MB
EGAF00008888627 cram 610.3 MB
EGAF00008888628 cram 826.2 MB
EGAF00008888629 cram 938.9 MB
EGAF00008888630 cram 1.1 GB
EGAF00008888631 cram 890.3 MB
EGAF00008888632 cram 970.6 MB
EGAF00008888633 cram 885.7 MB
EGAF00008888634 cram 951.9 MB
EGAF00008888635 cram 1.2 GB
EGAF00008888636 cram 1.1 GB
EGAF00008888637 cram 967.3 MB
EGAF00008888638 cram 935.5 MB
EGAF00008888639 cram 1.0 GB
EGAF00008888640 cram 1.4 GB
EGAF00008888641 cram 963.2 MB
EGAF00008888642 cram 1.0 GB
EGAF00008888643 cram 850.7 MB
EGAF00008888644 cram 910.4 MB
EGAF00008888645 cram 924.5 MB
EGAF00008888646 cram 846.3 MB
EGAF00008888647 cram 1.0 GB
EGAF00008888648 cram 1.0 GB
EGAF00008888649 cram 1.4 GB
EGAF00008888650 cram 926.0 MB
EGAF00008888651 cram 1.2 GB
EGAF00008888652 cram 1.2 GB
EGAF00008888653 cram 1.2 GB
EGAF00008888654 cram 989.0 MB
EGAF00008888655 cram 1.0 GB
EGAF00008888656 cram 1.5 GB
EGAF00008888657 cram 1.3 GB
EGAF00008888658 cram 1.2 GB
EGAF00008888659 cram 1.0 GB
EGAF00008888660 cram 960.5 MB
EGAF00008888661 cram 827.3 MB
EGAF00008888662 cram 1.1 GB
EGAF00008888663 cram 1.2 GB
EGAF00008888664 cram 1.1 GB
EGAF00008888665 cram 992.8 MB
EGAF00008888666 cram 1.0 GB
EGAF00008888667 cram 885.2 MB
EGAF00008888668 cram 1.1 GB
EGAF00008888669 cram 948.0 MB
EGAF00008888670 cram 1.1 GB
EGAF00008888671 cram 916.2 MB
EGAF00008888672 cram 1.1 GB
EGAF00008888673 cram 1.2 GB
EGAF00008888674 cram 1.5 GB
EGAF00008888675 cram 1.2 GB
EGAF00008888676 cram 998.6 MB
EGAF00008888677 cram 1.1 GB
EGAF00008888678 cram 1.4 GB
EGAF00008888679 cram 1.1 GB
EGAF00008888680 cram 1.1 GB
EGAF00008888681 cram 1.1 GB
EGAF00008888682 cram 1.1 GB
EGAF00008888683 cram 1.2 GB
EGAF00008888684 cram 985.7 MB
EGAF00008888685 cram 993.0 MB
EGAF00008888686 cram 1.0 GB
EGAF00008888687 cram 1.1 GB
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EGAF00008888689 cram 1.2 GB
EGAF00008888690 cram 917.3 MB
EGAF00008888691 cram 1.1 GB
EGAF00008888692 cram 1.5 GB
EGAF00008888693 cram 1.0 GB
EGAF00008888694 cram 1.1 GB
EGAF00008888695 cram 914.5 MB
EGAF00008888696 cram 1.1 GB
EGAF00008888697 cram 895.0 MB
EGAF00008888698 cram 1.4 GB
EGAF00008888699 cram 1.0 GB
EGAF00008888700 cram 1.0 GB
EGAF00008888701 cram 842.6 MB
EGAF00008888702 cram 1.5 GB
EGAF00008888703 cram 910.9 MB
EGAF00008888704 cram 1.4 GB
EGAF00008888705 cram 990.6 MB
EGAF00008888706 cram 1.4 GB
EGAF00008888707 cram 1.2 GB
EGAF00008888708 cram 1.5 GB
EGAF00008888709 cram 1.1 GB
EGAF00008888710 cram 1.4 GB
EGAF00008888711 cram 1.0 GB
EGAF00008888712 cram 1.2 GB
EGAF00008888713 cram 958.3 MB
EGAF00008888714 cram 964.6 MB
EGAF00008888715 cram 960.0 MB
EGAF00008888716 cram 1.1 GB
EGAF00008888717 cram 891.6 MB
EGAF00008888718 cram 1.1 GB
EGAF00008888719 cram 995.4 MB
EGAF00008888720 cram 1.2 GB
EGAF00008888721 cram 918.7 MB
EGAF00008888722 cram 942.9 MB
EGAF00008888723 cram 970.4 MB
EGAF00008888724 cram 1.2 GB
EGAF00008888725 cram 905.5 MB
EGAF00008888726 cram 734.5 MB
EGAF00008888727 cram 845.4 MB
EGAF00008888728 cram 848.4 MB
EGAF00008888729 cram 997.7 MB
EGAF00008888730 cram 959.8 MB
EGAF00008888731 cram 1.0 GB
EGAF00008888732 cram 920.5 MB
EGAF00008888733 cram 1.0 GB
EGAF00008888734 cram 1.0 GB
EGAF00008888735 cram 999.8 MB
EGAF00008888736 cram 1.2 GB
EGAF00008888737 cram 976.8 MB
EGAF00008888738 cram 896.0 MB
EGAF00008888739 cram 977.6 MB
EGAF00008888740 cram 1.4 GB
EGAF00008888741 cram 1.1 GB
EGAF00008888742 cram 996.9 MB
EGAF00008888743 cram 1.1 GB
EGAF00008888744 cram 1.0 GB
EGAF00008888745 cram 810.2 MB
EGAF00008888746 cram 607.1 MB
EGAF00008888747 cram 819.9 MB
EGAF00008888748 cram 931.2 MB
EGAF00008888749 cram 1.1 GB
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EGAF00008888751 cram 962.4 MB
EGAF00008888752 cram 878.7 MB
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EGAF00008888754 cram 1.2 GB
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EGAF00008888757 cram 928.7 MB
EGAF00008888758 cram 1.0 GB
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EGAF00008888761 cram 1.0 GB
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EGAF00008888763 cram 899.5 MB
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EGAF00008888765 cram 837.5 MB
EGAF00008888766 cram 1.0 GB
EGAF00008888767 cram 993.7 MB
EGAF00008888768 cram 1.4 GB
EGAF00008888769 cram 918.8 MB
EGAF00008888770 cram 1.1 GB
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EGAF00008888773 cram 981.2 MB
EGAF00008888774 cram 1.0 GB
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EGAF00008888778 cram 1.0 GB
EGAF00008888779 cram 955.7 MB
EGAF00008888780 cram 821.1 MB
EGAF00008888781 cram 1.1 GB
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EGAF00008888783 cram 1.1 GB
EGAF00008888784 cram 986.1 MB
EGAF00008888785 cram 1.0 GB
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EGAF00008888787 cram 1.5 GB
EGAF00008888788 cram 905.2 MB
EGAF00008888789 cram 1.4 GB
EGAF00008888790 cram 986.1 MB
EGAF00008888791 cram 1.4 GB
EGAF00008888792 cram 1.1 GB
EGAF00008888793 cram 1.5 GB
EGAF00008888794 cram 1.0 GB
EGAF00008888795 cram 1.4 GB
EGAF00008888796 cram 988.2 MB
EGAF00008888797 cram 1.2 GB
EGAF00008888798 cram 953.9 MB
EGAF00008888799 cram 958.9 MB
EGAF00008888800 cram 946.2 MB
EGAF00008888801 cram 1.1 GB
EGAF00008888802 cram 885.4 MB
EGAF00008888803 cram 1.1 GB
EGAF00008888804 cram 994.2 MB
EGAF00008888805 cram 1.1 GB
EGAF00008888806 cram 915.0 MB
EGAF00008888807 cram 936.7 MB
EGAF00008888808 cram 969.8 MB
EGAF00008888809 cram 1.2 GB
EGAF00008888810 cram 896.7 MB
EGAF00008888811 cram 729.2 MB
EGAF00008888812 cram 843.1 MB
EGAF00008888813 cram 833.9 MB
EGAF00008888814 cram 990.3 MB
EGAF00008888815 cram 944.3 MB
EGAF00008888816 cram 1.0 GB
EGAF00008888817 cram 915.9 MB
EGAF00008888818 cram 1.0 GB
EGAF00008888819 cram 1.0 GB
EGAF00008888820 cram 991.8 MB
EGAF00008888821 cram 1.2 GB
EGAF00008888822 cram 972.0 MB
EGAF00008888823 cram 885.7 MB
EGAF00008888824 cram 975.8 MB
EGAF00008888825 cram 1.4 GB
EGAF00008888826 cram 1.1 GB
EGAF00008888827 cram 981.6 MB
EGAF00008888828 cram 1.1 GB
EGAF00008888829 cram 1.0 GB
EGAF00008888830 cram 802.0 MB
EGAF00008888831 cram 601.4 MB
EGAF00008888832 cram 810.4 MB
EGAF00008888833 cram 925.3 MB
EGAF00008888834 cram 1.0 GB
EGAF00008888835 cram 883.8 MB
EGAF00008888836 cram 961.4 MB
EGAF00008888837 cram 873.9 MB
EGAF00008888838 cram 938.3 MB
EGAF00008888839 cram 1.2 GB
EGAF00008888840 cram 1.0 GB
EGAF00008888841 cram 952.3 MB
EGAF00008888842 cram 924.2 MB
EGAF00008888843 cram 1.0 GB
EGAF00008888844 cram 1.4 GB
EGAF00008888845 cram 951.9 MB
EGAF00008888846 cram 1.0 GB
EGAF00008888847 cram 833.5 MB
EGAF00008888848 cram 883.5 MB
EGAF00008888849 cram 911.3 MB
EGAF00008888850 cram 831.2 MB
EGAF00008888851 cram 988.7 MB
EGAF00008888852 cram 983.2 MB
476 Files (497.4 GB)