About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Genotyping data from four arrays for 90 Asian individuals (Illumina GDA, Illumina GSA, Illumina OncoArray, and ThermoFisher Axiom)

A uniquely comprehensive genetic profile of 90 "healthy" Asian individuals who are representative of the diverse multi-ethnic population of Singapore, with 65 females and 25 males, aged 21 to 61 years, from the major ethnic groups (63 Chinese, 9 Malay, 18 Indian). This is a subset of the 92 participants described in PMID 41387625 (DOI: 10.1038/s43856-025-01298-4), who agreed to share their genetic data for future research beyond the original study. Replicates for one female (Coriell Cat# GM18592, RRID:CVCL_P195) and one male (Coriell Cat# GM18609, RRID:CVCL_P207) control cell line of type B-Lymphocyte, ethnicity Han Chinese from the NHGRI Sample Repository for Human Genetic Research were also included. This dataset consists of individual-level genetic data from 4 genotyping arrays -- the Illumina Infinium Global Diversity Array (GDA) v1.0, the Illumina Infinium Global Screening Array (GSA) v3.0, the Illumina Infinium OncoArray-500K v1.0, and a custom ThermoFisher Scientific's Applied Biosystems Axiom array. Data from low-coverage whole genome sequencing (lc-WGS read length 2X150bp) for the same samples is also available on EGA (EGAD50000002806).

Request Access

DUO:0000006
version: 2021-02-23

health or medical or biomedical research

This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

GIS Data access policy for genomic platform comparison

Please submit a data request with a brief description of the following: 1) Your name, designation, and institutional email address 2) Dataset requested: Dataset name, EGAD identifier 3) Project description: How will the data be used? 4) Data security: How will the data be stored? 5) Is ethical approval required and/or obtained? You will also be required to sign a Data Access Agreement (DAA). You will receive a copy of this via email.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001008439 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00009052894 bed 13.4 MB
EGAF00009052895 bim 72.5 MB
EGAF00009052896 bed 15.7 MB
EGAF00009052897 csv 2.3 kB
EGAF00009052898 fam 2.3 kB
EGAF00009052899 bim 24.9 MB
EGAF00009052900 bim 19.1 MB
EGAF00009052901 fam 2.3 kB
EGAF00009052902 bed 45.7 MB
EGAF00009052903 fam 2.2 kB
EGAF00009052904 fam 2.3 kB
EGAF00009052905 bed 12.0 MB
EGAF00009052906 bim 18.0 MB
13 Files (221.3 MB)