About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Poland Warmian-Mazurian Voivodeship WGS

This project used NGS (next generation sequencing), using Illumina NOVASEQ 6000 and Illumina DRAGEN aligner. The dataset includes BAM and BAM.BAI files from Whole Genome Sequencing of 15 samples (8 female, 7 male of Warmian-Mazurian Voivodeship, Poland from POPULOUS collection). Library Construction Protocol: Illumina DNA PCR-Free Prep, Tagmentation. Reference Genome: GRCh37.

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DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DUO:0000046
version: 2021-02-23

non-commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit use.

Genomic map of Poland policy

Access to data generated by Biobank Lab at the Department of Oncobiology and Epigenetics, University of Lodz is available by application to the data access committee and will be granted to qualified investigators for appropriate use

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000091 Whole Genome Sequencing
  • Changed reference to study in experiments and analyses. Added new informations to the dataset description.
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000058485 bai 9.3 MB
Federated EGA
EGAF50000058486 bai 9.1 MB
Federated EGA
EGAF50000058487 bai 9.0 MB
Federated EGA
EGAF50000058488 bai 9.0 MB
Federated EGA
EGAF50000058489 bai 9.7 MB
Federated EGA
EGAF50000058490 bai 9.1 MB
Federated EGA
EGAF50000058491 bai 9.3 MB
Federated EGA
EGAF50000058492 bai 8.9 MB
Federated EGA
EGAF50000058493 bai 8.9 MB
Federated EGA
EGAF50000058494 bai 9.0 MB
Federated EGA
EGAF50000058495 bam 56.7 GB
Federated EGA
EGAF50000058496 bam 61.8 GB
Federated EGA
EGAF50000058497 bai 9.0 MB
Federated EGA
EGAF50000058498 bam 76.6 GB
Federated EGA
EGAF50000058499 bai 9.0 MB
Federated EGA
EGAF50000058500 bai 8.9 MB
Federated EGA
EGAF50000058501 bai 9.1 MB
Federated EGA
EGAF50000058502 bam 93.4 GB
Federated EGA
EGAF50000058503 bai 9.1 MB
Federated EGA
EGAF50000058504 bam 49.7 GB
Federated EGA
EGAF50000058505 bam 54.1 GB
Federated EGA
EGAF50000058506 bam 37.8 GB
Federated EGA
EGAF50000058507 bam 53.4 GB
Federated EGA
EGAF50000058508 bam 124.7 GB
Federated EGA
EGAF50000058509 bam 69.1 GB
Federated EGA
EGAF50000058510 bam 160.3 GB
Federated EGA
EGAF50000058511 bam 68.2 GB
Federated EGA
EGAF50000058512 bam 110.3 GB
Federated EGA
EGAF50000058513 bam 171.6 GB
Federated EGA
EGAF50000058514 bam 145.5 GB
Federated EGA
30 Files (1.3 TB)