Single-cell RNA-sequencing of peritoneal fluid from patients with achalasia
The data published here contains single-cell RNA-sequencing (scRNAseq) data as obtained using the 3' scRNAseq using Chromium Single Cell 3’ Reagent from 10X Genomics on peritoneal fluid (PF) from patients with achalasia. Sequencing was performed in a paired-ended fashion on the NovaSeq6000.
- 05/02/2024
- 5 samples
- DAC: EGAC50000000463
- Technology: Illumina NovaSeq 6000
Data Access Policy Tytgat Institute AmsterdamUMC
Access requests undergo a comprehensive review by the Data Access Committee of Tytgat Institute for Liver and Intestinal Research, Amsterdam UMC (DAC-TI). Request will only be granted to qualified users for appropriate use. Applicants are required to submit detailed proposals outlining the purpose, methodology, and ethical considerations of their research. Procedure: 1) The Applicant sends a data access request through European Genome-phenome Archive (EGA) to the DAC-TI. 2) Upon submission, a representative of the DAC-TI will send a Data Request Form (DRF) to the Application. Upon completing the DRF, this form must be returned to the DAC-TI whereupon the evaluation process will commence. 3) When a request is positively evaluated, the applicant will be asked to sign the Data Sharing Agreement. Review and Conditions: - Each DRF is assessed based on the scientific profile of the applicants, the scientific merit, ethical implications, data security plans, and compliance with the relevant regulations, within a specified timeframe. - The DAC-TI reserves the right to conduct periodic reviews to ensure responsible data use. - Approval is contingent on meeting the criteria and compliance with relevant regulations.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS50000000174 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF50000083592 | fastq.gz | 19.7 GB | ||
EGAF50000083595 | fastq.gz | 3.9 GB | ||
EGAF50000083596 | fastq.gz | 14.2 GB | ||
EGAF50000083599 | fastq.gz | 17.7 GB | ||
EGAF50000083600 | fastq.gz | 4.9 GB | ||
EGAF50000083605 | fastq.gz | 4.1 GB | ||
EGAF50000083606 | fastq.gz | 15.1 GB | ||
EGAF50000083611 | fastq.gz | 5.4 GB | ||
EGAF50000083616 | fastq.gz | 4.9 GB | ||
EGAF50000083617 | fastq.gz | 17.9 GB | ||
10 Files (107.8 GB) |