Bulk RNAseq of cultured fibroblasts
Fastq files from bulk RNAseq of fibroblasts after culture and facs sorting (N=9). Sorted FAP+ CAF cells RNAs were extracted using Qiagen miRNeasy Kit (Qiagen, #217004) according to the manufacturer's instructions. Verification of RNA integrity and quality was performed using the Agilent RNA 6000 nano Kit (Agilent Technologies, #5067-1511). cDNA libraries were prepared using the TruSeq Stranded mRNA Kit (Illumina, #20020594) followed by sequencing on NovaSeq (Illumina).
- 07/03/2024
- 9 samples
- DAC: EGAC00001000581
- Technology: Illumina NovaSeq 6000
Data Access policy
Access to the sequence level data produced by the «U830 Stress and Cancer» laboratory at the Institut Curie is controlled by Fatima Mechta-Grigoriou, Principal Investigator (DAC). Access to data will be granted to qualified investigators for appropriate use after request to Fatima.Mechta-Grigoriou@curie.fr
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000220 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000063388 | fastq.gz | 2.4 GB | ||
| EGAF50000063389 | fastq.gz | 2.4 GB | ||
| EGAF50000063390 | fastq.gz | 2.1 GB | ||
| EGAF50000063391 | fastq.gz | 2.1 GB | ||
| EGAF50000063396 | fastq.gz | 2.5 GB | ||
| EGAF50000063397 | fastq.gz | 2.5 GB | ||
| EGAF50000087503 | fastq.gz | 2.1 GB | ||
| EGAF50000087504 | fastq.gz | 2.0 GB | ||
| EGAF50000087505 | fastq.gz | 2.4 GB | ||
| EGAF50000087506 | fastq.gz | 2.4 GB | ||
| EGAF50000087507 | fastq.gz | 2.3 GB | ||
| EGAF50000087508 | fastq.gz | 2.2 GB | ||
| EGAF50000087509 | fastq.gz | 1.9 GB | ||
| EGAF50000087510 | fastq.gz | 1.9 GB | ||
| EGAF50000087511 | fastq.gz | 2.7 GB | ||
| EGAF50000087512 | fastq.gz | 2.7 GB | ||
| EGAF50000087535 | fastq.gz | 2.0 GB | ||
| EGAF50000087536 | fastq.gz | 2.0 GB | ||
| 18 Files (40.6 GB) | ||||