WES and RNAseq dataset
This dataset includes WES and RNAseq for 7 patients with metastatic melanoma (4), non-small cell lung adenocarcnioma (1), cervix adenocarcinoma (1), and Epidermoid nasophaeyngeal carcinoma (1), enrolled in phase I clinical trials (NCT03475134m NCT04643574 and NCT05195619). WES was performed on matched cancer and healthy tissues, whereas RNAseq was performed on cancer tissues, using Illumina HiSeq 4000/6000 and Illumina NextSeq 500/550 systems.
- 14/08/2024
- 33 samples
- DAC: EGAC00001002246
- Technologies: Illumina HiSeq 4000, Illumina NovaSeq 6000, NextSeq 500, NextSeq 550
CHUV DAC
It is required that users obtain authorization from the CHUV for accessing the controlled data. Any user requesting access to the controlled data must apply for authorization and sign a Data Transfer and Use Agreement, which is granted by the Data Access Committee (DAC). DACs review and approve or disapprove all requests from the research community for data access. Decisions to grant access are made based on whether the request conforms to program specific requirements or procedures. Any user accessing the above data must adhere to a Data Transfer and Use Agreement.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000228 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000088705 | fastq.gz | 12.1 GB | ||
| EGAF50000088706 | fastq.gz | 12.3 GB | ||
| EGAF50000088707 | fastq.gz | 7.0 GB | ||
| EGAF50000088708 | fastq.gz | 7.3 GB | ||
| EGAF50000088709 | fastq.gz | 14.6 GB | ||
| EGAF50000088710 | fastq.gz | 14.9 GB | ||
| EGAF50000088711 | fastq.gz | 7.4 GB | ||
| EGAF50000088712 | fastq.gz | 7.7 GB | ||
| EGAF50000088713 | fastq.gz | 4.9 GB | ||
| EGAF50000088714 | fastq.gz | 5.0 GB | ||
| EGAF50000088715 | fastq.gz | 11.1 GB | ||
| EGAF50000088716 | fastq.gz | 11.7 GB | ||
| EGAF50000088717 | fastq.gz | 8.2 GB | ||
| EGAF50000088718 | fastq.gz | 8.2 GB | ||
| EGAF50000088719 | fastq.gz | 7.9 GB | ||
| EGAF50000088720 | fastq.gz | 8.2 GB | ||
| EGAF50000088721 | fastq.gz | 8.9 GB | ||
| EGAF50000088722 | fastq.gz | 9.0 GB | ||
| EGAF50000088723 | fastq.gz | 5.9 GB | ||
| EGAF50000088724 | fastq.gz | 6.1 GB | ||
| EGAF50000088725 | fastq.gz | 8.6 GB | ||
| EGAF50000088726 | fastq.gz | 8.4 GB | ||
| EGAF50000088727 | fastq.gz | 6.2 GB | ||
| EGAF50000088728 | fastq.gz | 6.5 GB | ||
| EGAF50000088729 | fastq.gz | 3.9 GB | ||
| EGAF50000088730 | fastq.gz | 4.1 GB | ||
| EGAF50000088731 | fastq.gz | 5.3 GB | ||
| EGAF50000088732 | fastq.gz | 5.2 GB | ||
| EGAF50000088733 | fastq.gz | 5.0 GB | ||
| EGAF50000088734 | fastq.gz | 5.2 GB | ||
| EGAF50000088735 | fastq.gz | 5.0 GB | ||
| EGAF50000088736 | fastq.gz | 5.2 GB | ||
| EGAF50000088737 | fastq.gz | 4.7 GB | ||
| EGAF50000088738 | fastq.gz | 4.9 GB | ||
| EGAF50000088739 | fastq.gz | 4.7 GB | ||
| EGAF50000088740 | fastq.gz | 4.5 GB | ||
| EGAF50000088741 | fastq.gz | 4.2 GB | ||
| EGAF50000088742 | fastq.gz | 4.4 GB | ||
| EGAF50000088743 | fastq.gz | 6.0 GB | ||
| EGAF50000088744 | fastq.gz | 6.3 GB | ||
| EGAF50000088745 | fastq.gz | 5.6 GB | ||
| EGAF50000088746 | fastq.gz | 5.4 GB | ||
| EGAF50000088747 | fastq.gz | 3.4 GB | ||
| EGAF50000088748 | fastq.gz | 3.5 GB | ||
| EGAF50000088749 | fastq.gz | 3.2 GB | ||
| EGAF50000088750 | fastq.gz | 3.3 GB | ||
| EGAF50000088751 | fastq.gz | 3.0 GB | ||
| EGAF50000088752 | fastq.gz | 3.1 GB | ||
| EGAF50000088753 | fastq.gz | 4.0 GB | ||
| EGAF50000088754 | fastq.gz | 3.9 GB | ||
| EGAF50000088755 | fastq.gz | 2.4 GB | ||
| EGAF50000088756 | fastq.gz | 2.5 GB | ||
| EGAF50000088757 | fastq.gz | 2.5 GB | ||
| EGAF50000088758 | fastq.gz | 2.5 GB | ||
| EGAF50000088759 | fastq.gz | 3.5 GB | ||
| EGAF50000088760 | fastq.gz | 3.6 GB | ||
| EGAF50000088761 | fastq.gz | 3.4 GB | ||
| EGAF50000088762 | fastq.gz | 3.4 GB | ||
| EGAF50000088763 | fastq.gz | 3.2 GB | ||
| EGAF50000088764 | fastq.gz | 3.2 GB | ||
| EGAF50000088765 | fastq.gz | 3.0 GB | ||
| EGAF50000088766 | fastq.gz | 3.0 GB | ||
| EGAF50000088767 | fastq.gz | 3.4 GB | ||
| EGAF50000088768 | fastq.gz | 3.4 GB | ||
| EGAF50000088769 | fastq.gz | 7.7 GB | ||
| EGAF50000088770 | fastq.gz | 7.8 GB | ||
| EGAF50000088771 | fastq.gz | 2.3 GB | ||
| EGAF50000088772 | fastq.gz | 2.4 GB | ||
| EGAF50000088773 | fastq.gz | 18.8 GB | ||
| EGAF50000088774 | fastq.gz | 19.4 GB | ||
| EGAF50000088775 | fastq.gz | 17.1 GB | ||
| EGAF50000088776 | fastq.gz | 17.5 GB | ||
| EGAF50000088777 | fastq.gz | 26.8 GB | ||
| EGAF50000088778 | fastq.gz | 26.0 GB | ||
| EGAF50000088779 | fastq.gz | 13.6 GB | ||
| EGAF50000088780 | fastq.gz | 14.0 GB | ||
| EGAF50000088781 | fastq.gz | 13.0 GB | ||
| EGAF50000088782 | fastq.gz | 13.6 GB | ||
| EGAF50000088783 | fastq.gz | 11.0 GB | ||
| EGAF50000088784 | fastq.gz | 10.7 GB | ||
| EGAF50000088785 | fastq.gz | 11.1 GB | ||
| EGAF50000088786 | fastq.gz | 11.4 GB | ||
| EGAF50000088787 | fastq.gz | 13.6 GB | ||
| EGAF50000088788 | fastq.gz | 14.4 GB | ||
| EGAF50000088789 | fastq.gz | 10.5 GB | ||
| EGAF50000088790 | fastq.gz | 10.1 GB | ||
| EGAF50000088791 | fastq.gz | 14.2 GB | ||
| EGAF50000088792 | fastq.gz | 14.9 GB | ||
| EGAF50000088793 | fastq.gz | 10.3 GB | ||
| EGAF50000088794 | fastq.gz | 10.8 GB | ||
| EGAF50000088795 | fastq.gz | 10.3 GB | ||
| EGAF50000088796 | fastq.gz | 10.9 GB | ||
| EGAF50000088797 | fastq.gz | 6.5 GB | ||
| EGAF50000088798 | fastq.gz | 6.1 GB | ||
| EGAF50000088799 | fastq.gz | 9.1 GB | ||
| EGAF50000088800 | fastq.gz | 8.8 GB | ||
| EGAF50000088801 | fastq.gz | 9.7 GB | ||
| EGAF50000088802 | fastq.gz | 10.0 GB | ||
| EGAF50000088803 | fastq.gz | 8.1 GB | ||
| EGAF50000088804 | fastq.gz | 8.0 GB | ||
| EGAF50000088805 | fastq.gz | 1.2 GB | ||
| EGAF50000088806 | fastq.gz | 1.3 GB | ||
| EGAF50000088807 | fastq.gz | 2.8 GB | ||
| EGAF50000088808 | fastq.gz | 3.0 GB | ||
| 104 Files (806.8 GB) | ||||