About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WES and RNAseq dataset

This dataset includes WES and RNAseq for 7 patients with metastatic melanoma (4), non-small cell lung adenocarcnioma (1), cervix adenocarcinoma (1), and Epidermoid nasophaeyngeal carcinoma (1), enrolled in phase I clinical trials (NCT03475134m NCT04643574 and NCT05195619). WES was performed on matched cancer and healthy tissues, whereas RNAseq was performed on cancer tissues, using Illumina HiSeq 4000/6000 and Illumina NextSeq 500/550 systems.

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CHUV DAC

It is required that users obtain authorization from the CHUV for accessing the controlled data. Any user requesting access to the controlled data must apply for authorization and sign a Data Transfer and Use Agreement, which is granted by the Data Access Committee (DAC). DACs review and approve or disapprove all requests from the research community for data access. Decisions to grant access are made based on whether the request conforms to program specific requirements or procedures. Any user accessing the above data must adhere to a Data Transfer and Use Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000228 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000088705 fastq.gz 12.1 GB Report
EGAF50000088706 fastq.gz 12.3 GB Report
EGAF50000088707 fastq.gz 7.0 GB Report
EGAF50000088708 fastq.gz 7.3 GB Report
EGAF50000088709 fastq.gz 14.6 GB Report
EGAF50000088710 fastq.gz 14.9 GB Report
EGAF50000088711 fastq.gz 7.4 GB Report
EGAF50000088712 fastq.gz 7.7 GB Report
EGAF50000088713 fastq.gz 4.9 GB Report
EGAF50000088714 fastq.gz 5.0 GB Report
EGAF50000088715 fastq.gz 11.1 GB Report
EGAF50000088716 fastq.gz 11.7 GB Report
EGAF50000088717 fastq.gz 8.2 GB Report
EGAF50000088718 fastq.gz 8.2 GB Report
EGAF50000088719 fastq.gz 7.9 GB Report
EGAF50000088720 fastq.gz 8.2 GB Report
EGAF50000088721 fastq.gz 8.9 GB Report
EGAF50000088722 fastq.gz 9.0 GB Report
EGAF50000088723 fastq.gz 5.9 GB Report
EGAF50000088724 fastq.gz 6.1 GB Report
EGAF50000088725 fastq.gz 8.6 GB Report
EGAF50000088726 fastq.gz 8.4 GB Report
EGAF50000088727 fastq.gz 6.2 GB Report
EGAF50000088728 fastq.gz 6.5 GB Report
EGAF50000088729 fastq.gz 3.9 GB Report
EGAF50000088730 fastq.gz 4.1 GB Report
EGAF50000088731 fastq.gz 5.3 GB Report
EGAF50000088732 fastq.gz 5.2 GB Report
EGAF50000088733 fastq.gz 5.0 GB Report
EGAF50000088734 fastq.gz 5.2 GB Report
EGAF50000088735 fastq.gz 5.0 GB Report
EGAF50000088736 fastq.gz 5.2 GB Report
EGAF50000088737 fastq.gz 4.7 GB Report
EGAF50000088738 fastq.gz 4.9 GB Report
EGAF50000088739 fastq.gz 4.7 GB Report
EGAF50000088740 fastq.gz 4.5 GB Report
EGAF50000088741 fastq.gz 4.2 GB Report
EGAF50000088742 fastq.gz 4.4 GB Report
EGAF50000088743 fastq.gz 6.0 GB Report
EGAF50000088744 fastq.gz 6.3 GB Report
EGAF50000088745 fastq.gz 5.6 GB Report
EGAF50000088746 fastq.gz 5.4 GB Report
EGAF50000088747 fastq.gz 3.4 GB Report
EGAF50000088748 fastq.gz 3.5 GB Report
EGAF50000088749 fastq.gz 3.2 GB Report
EGAF50000088750 fastq.gz 3.3 GB Report
EGAF50000088751 fastq.gz 3.0 GB Report
EGAF50000088752 fastq.gz 3.1 GB Report
EGAF50000088753 fastq.gz 4.0 GB Report
EGAF50000088754 fastq.gz 3.9 GB Report
EGAF50000088755 fastq.gz 2.4 GB Report
EGAF50000088756 fastq.gz 2.5 GB Report
EGAF50000088757 fastq.gz 2.5 GB Report
EGAF50000088758 fastq.gz 2.5 GB Report
EGAF50000088759 fastq.gz 3.5 GB Report
EGAF50000088760 fastq.gz 3.6 GB Report
EGAF50000088761 fastq.gz 3.4 GB Report
EGAF50000088762 fastq.gz 3.4 GB Report
EGAF50000088763 fastq.gz 3.2 GB Report
EGAF50000088764 fastq.gz 3.2 GB Report
EGAF50000088765 fastq.gz 3.0 GB Report
EGAF50000088766 fastq.gz 3.0 GB Report
EGAF50000088767 fastq.gz 3.4 GB Report
EGAF50000088768 fastq.gz 3.4 GB Report
EGAF50000088769 fastq.gz 7.7 GB Report
EGAF50000088770 fastq.gz 7.8 GB Report
EGAF50000088771 fastq.gz 2.3 GB Report
EGAF50000088772 fastq.gz 2.4 GB Report
EGAF50000088773 fastq.gz 18.8 GB Report
EGAF50000088774 fastq.gz 19.4 GB Report
EGAF50000088775 fastq.gz 17.1 GB Report
EGAF50000088776 fastq.gz 17.5 GB Report
EGAF50000088777 fastq.gz 26.8 GB Report
EGAF50000088778 fastq.gz 26.0 GB Report
EGAF50000088779 fastq.gz 13.6 GB Report
EGAF50000088780 fastq.gz 14.0 GB Report
EGAF50000088781 fastq.gz 13.0 GB Report
EGAF50000088782 fastq.gz 13.6 GB Report
EGAF50000088783 fastq.gz 11.0 GB Report
EGAF50000088784 fastq.gz 10.7 GB Report
EGAF50000088785 fastq.gz 11.1 GB Report
EGAF50000088786 fastq.gz 11.4 GB Report
EGAF50000088787 fastq.gz 13.6 GB Report
EGAF50000088788 fastq.gz 14.4 GB Report
EGAF50000088789 fastq.gz 10.5 GB Report
EGAF50000088790 fastq.gz 10.1 GB Report
EGAF50000088791 fastq.gz 14.2 GB Report
EGAF50000088792 fastq.gz 14.9 GB Report
EGAF50000088793 fastq.gz 10.3 GB Report
EGAF50000088794 fastq.gz 10.8 GB Report
EGAF50000088795 fastq.gz 10.3 GB Report
EGAF50000088796 fastq.gz 10.9 GB Report
EGAF50000088797 fastq.gz 6.5 GB Report
EGAF50000088798 fastq.gz 6.1 GB Report
EGAF50000088799 fastq.gz 9.1 GB Report
EGAF50000088800 fastq.gz 8.8 GB Report
EGAF50000088801 fastq.gz 9.7 GB Report
EGAF50000088802 fastq.gz 10.0 GB Report
EGAF50000088803 fastq.gz 8.1 GB Report
EGAF50000088804 fastq.gz 8.0 GB Report
EGAF50000088805 fastq.gz 1.2 GB Report
EGAF50000088806 fastq.gz 1.3 GB Report
EGAF50000088807 fastq.gz 2.8 GB Report
EGAF50000088808 fastq.gz 3.0 GB Report
104 Files (806.8 GB)