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DNA sequences from adolescent and young adult patients with melanoma treated with immunotherapy

Sequencing libraries were prepared and barcoded using the unique molecular identifier and index tagging following the VariantPlex Somatic Protocol (ArcherDx). Pool-library was loaded at 1.2 pM concentration with 20% PhiX and paired-end sequencing was performed using the NextSeq 500 Illumina sequencer using 300 cycle high output reagent kit.

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The data sets were collected under the Melanoma Institute Australia Biospecimen Bank for Melanoma Research Protocol, Melanoma Research Database Protocol and Melanoma Institute Australia Molecular Pathology, Genomics and Clinical Outcomes Of Melanoma And Related Skin Tumor Protocol.

Samples were collected under the Melanoma Institute Australia Biospecimen Bank for Melanoma Research Protocol (X15-0454, HREC/11/RPAH/444), and clinical data were collected under the Melanoma Institute Australia: Melanoma Research Database Protocol (X15-0311, HREC/10/RPAH/530). Analysis was conducted under the Melanoma Institute Australia Molecular Pathology, Genomics and Clinical Outcomes Of Melanoma And Related Skin Tumor Protocol (X17-0312, HREC/11/RPAH/32)

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000238 Exome Sequencing
  • Added a publication with pubmed ID related to this dataset
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000091109 fastq.gz 126.9 MB
EGAF50000091110 fastq.gz 132.8 MB
EGAF50000091111 fastq.gz 228.2 MB
EGAF50000091112 fastq.gz 233.4 MB
EGAF50000091113 fastq.gz 233.8 MB
EGAF50000091114 fastq.gz 244.1 MB
EGAF50000091115 fastq.gz 168.9 MB
EGAF50000091116 fastq.gz 161.0 MB
EGAF50000091117 fastq.gz 140.4 MB
EGAF50000091118 fastq.gz 146.9 MB
EGAF50000091119 fastq.gz 149.5 MB
EGAF50000091120 fastq.gz 156.1 MB
EGAF50000091121 fastq.gz 229.1 MB
EGAF50000091122 fastq.gz 219.5 MB
EGAF50000091123 fastq.gz 182.0 MB
EGAF50000091124 fastq.gz 191.6 MB
EGAF50000091125 fastq.gz 233.4 MB
EGAF50000091126 fastq.gz 245.0 MB
EGAF50000091127 fastq.gz 202.7 MB
EGAF50000091128 fastq.gz 211.5 MB
EGAF50000091129 fastq.gz 174.0 MB
EGAF50000091130 fastq.gz 180.9 MB
EGAF50000091131 fastq.gz 242.8 MB
EGAF50000091132 fastq.gz 253.5 MB
EGAF50000091133 fastq.gz 194.5 MB
EGAF50000091134 fastq.gz 200.2 MB
EGAF50000091135 fastq.gz 180.0 MB
EGAF50000091136 fastq.gz 184.9 MB
EGAF50000091137 fastq.gz 201.6 MB
EGAF50000091138 fastq.gz 212.2 MB
EGAF50000091139 fastq.gz 279.1 MB
EGAF50000091140 fastq.gz 290.4 MB
EGAF50000091141 fastq.gz 145.4 MB
EGAF50000091142 fastq.gz 149.7 MB
EGAF50000091143 fastq.gz 136.2 MB
EGAF50000091144 fastq.gz 141.8 MB
EGAF50000091145 fastq.gz 191.4 MB
EGAF50000091146 fastq.gz 197.9 MB
EGAF50000091147 fastq.gz 242.2 MB
EGAF50000091148 fastq.gz 252.7 MB
EGAF50000091149 fastq.gz 147.3 MB
EGAF50000091150 fastq.gz 151.4 MB
EGAF50000091151 fastq.gz 1.7 GB
EGAF50000091152 fastq.gz 1.6 GB
EGAF50000091153 fastq.gz 207.1 MB
EGAF50000091154 fastq.gz 199.2 MB
EGAF50000091155 fastq.gz 172.0 MB
EGAF50000091156 fastq.gz 176.7 MB
EGAF50000091157 fastq.gz 178.7 MB
EGAF50000091158 fastq.gz 186.3 MB
EGAF50000091159 fastq.gz 178.7 MB
EGAF50000091160 fastq.gz 170.6 MB
EGAF50000091161 fastq.gz 222.7 MB
EGAF50000091162 fastq.gz 215.4 MB
EGAF50000091163 fastq.gz 206.5 MB
EGAF50000091164 fastq.gz 212.4 MB
56 Files (13.8 GB)