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TOAPR-B patient cell-free DNA WGS and WES

Sequencing files for TOPARP-B patients as described in manuscript

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TOPARP-B Sequencing Data Sharing Policy

The dataset is accessible to the scientific community via EGA. Researchers interested in accessing the dataset may do so by following the procedures outlined on the platform, including providing details on the intended usage and agreeing to the platform's terms of use. Access to the dataset is governed by the platform's policies, which encompass acknowledgment of the original data source, adherence to ethical standards and legal regulations. Users are expected to handle the data with care, maintaining confidentiality and complying with data protection laws. Proper citation of the dataset in publications is required. Collaborative initiatives for further analysis or interpretation are strongly encouraged. This data access policy reflects our commitment to transparent and responsible data sharing practices, promoting collaboration and innovation within the research community.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000280 Whole Genome Sequencing
EGAS50000000281 Exome Sequencing
  • Dataset Released
  • Corrected minor typo in study title - apologies.

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000095382 fastq.gz 135.3 GB
EGAF50000095383 fastq.gz 52.1 GB
EGAF50000095384 fastq.gz 147.2 GB
EGAF50000095385 fastq.gz 41.8 GB
EGAF50000095386 fastq.gz 130.6 GB
EGAF50000095387 fastq.gz 137.7 GB
EGAF50000095388 fastq.gz 135.5 GB
EGAF50000095389 fastq.gz 147.0 GB
EGAF50000095390 fastq.gz 154.9 GB
EGAF50000095391 fastq.gz 146.1 GB
EGAF50000095392 fastq.gz 39.3 GB
EGAF50000095393 fastq.gz 41.4 GB
EGAF50000095394 fastq.gz 151.2 GB
EGAF50000095395 fastq.gz 105.1 GB
EGAF50000095396 fastq.gz 41.0 GB
EGAF50000095397 fastq.gz 108.9 GB
EGAF50000095398 fastq.gz 2.2 GB
EGAF50000095399 fastq.gz 2.2 GB
EGAF50000095400 fastq.gz 2.2 GB
EGAF50000095401 fastq.gz 2.2 GB
EGAF50000095402 fastq.gz 1.0 GB
EGAF50000095403 fastq.gz 1.0 GB
EGAF50000095404 fastq.gz 1.3 GB
EGAF50000095405 fastq.gz 1.3 GB
EGAF50000095406 fastq.gz 1.2 GB
EGAF50000095407 fastq.gz 1.2 GB
EGAF50000095408 fastq.gz 1.9 GB
EGAF50000095409 fastq.gz 1.9 GB
EGAF50000095410 fastq.gz 2.8 GB
EGAF50000095411 fastq.gz 42.2 GB
EGAF50000095412 fastq.gz 112.4 GB
EGAF50000095413 fastq.gz 117.4 GB
EGAF50000095414 fastq.gz 1.8 GB
EGAF50000095415 fastq.gz 1.8 GB
EGAF50000095416 fastq.gz 1.1 GB
EGAF50000095417 fastq.gz 122.8 GB
EGAF50000095418 fastq.gz 128.0 GB
EGAF50000095419 fastq.gz 3.6 GB
EGAF50000095420 fastq.gz 2.5 GB
EGAF50000095421 fastq.gz 2.0 GB
EGAF50000095422 fastq.gz 138.7 GB
EGAF50000095423 fastq.gz 65.5 GB
EGAF50000095424 fastq.gz 68.0 GB
EGAF50000095425 bam 5.7 kB
EGAF50000095426 bam 11.2 kB
EGAF50000095427 bam 2.4 GB
EGAF50000095428 fastq.gz 2.2 GB
EGAF50000095429 fastq.gz 2.2 GB
EGAF50000095430 fastq.gz 1.0 GB
EGAF50000095431 fastq.gz 3.6 GB
EGAF50000095432 fastq.gz 2.0 GB
EGAF50000095433 fastq.gz 1.1 GB
EGAF50000095434 fastq.gz 1.1 GB
EGAF50000095435 fastq.gz 1.2 GB
EGAF50000095436 fastq.gz 1.2 GB
EGAF50000095437 fastq.gz 951.6 MB
EGAF50000095438 fastq.gz 952.4 MB
EGAF50000095439 fastq.gz 1.6 GB
EGAF50000095440 fastq.gz 1.7 GB
EGAF50000095441 fastq.gz 1.6 GB
EGAF50000095442 fastq.gz 1.4 GB
EGAF50000095443 fastq.gz 2.1 GB
EGAF50000095444 fastq.gz 115.2 GB
EGAF50000095445 fastq.gz 1.6 GB
EGAF50000095446 fastq.gz 3.5 GB
EGAF50000095447 fastq.gz 1.5 GB
EGAF50000095448 fastq.gz 1.9 GB
EGAF50000095449 fastq.gz 1.1 GB
EGAF50000095450 fastq.gz 1.8 GB
EGAF50000095451 fastq.gz 2.0 GB
EGAF50000095452 fastq.gz 1.3 GB
EGAF50000095453 fastq.gz 2.4 GB
EGAF50000095454 fastq.gz 2.4 GB
EGAF50000095455 fastq.gz 759.3 MB
EGAF50000095456 fastq.gz 1.8 GB
EGAF50000095457 fastq.gz 1.0 GB
EGAF50000095458 fastq.gz 1.3 GB
EGAF50000095459 fastq.gz 2.9 GB
EGAF50000095460 fastq.gz 1.4 GB
EGAF50000095461 fastq.gz 1.9 GB
EGAF50000095462 fastq.gz 1.2 GB
EGAF50000095463 fastq.gz 661.2 MB
EGAF50000095464 fastq.gz 644.7 MB
EGAF50000095465 fastq.gz 1.3 GB
EGAF50000095466 fastq.gz 3.8 GB
EGAF50000095467 fastq.gz 1.8 GB
EGAF50000095468 fastq.gz 1.1 GB
EGAF50000095469 fastq.gz 782.5 MB
EGAF50000095470 fastq.gz 785.1 MB
EGAF50000095471 fastq.gz 2.3 GB
EGAF50000095472 fastq.gz 1.2 GB
EGAF50000095473 fastq.gz 5.4 GB
EGAF50000095474 fastq.gz 2.7 GB
EGAF50000095475 fastq.gz 1.7 GB
EGAF50000095476 fastq.gz 1.6 GB
EGAF50000095477 fastq.gz 1.8 GB
EGAF50000095478 fastq.gz 1.8 GB
EGAF50000095479 bam 2.9 GB
EGAF50000095480 bam 216.9 MB
EGAF50000095481 fastq.gz 2.3 GB
EGAF50000095482 bam 1.5 GB
EGAF50000095483 fastq.gz 2.2 GB
EGAF50000095484 fastq.gz 2.2 GB
EGAF50000095485 fastq.gz 2.3 GB
EGAF50000095486 fastq.gz 1.3 GB
EGAF50000095487 fastq.gz 1.6 GB
EGAF50000095488 fastq.gz 1.6 GB
EGAF50000095489 fastq.gz 1.1 GB
EGAF50000095490 fastq.gz 1.8 GB
EGAF50000095491 fastq.gz 1.3 GB
EGAF50000095492 fastq.gz 1.4 GB
EGAF50000095493 fastq.gz 1.3 GB
EGAF50000095494 fastq.gz 753.7 MB
EGAF50000095495 fastq.gz 2.0 GB
EGAF50000095496 fastq.gz 1.6 GB
EGAF50000095497 fastq.gz 5.3 GB
EGAF50000095498 fastq.gz 10.9 GB
EGAF50000095499 bam 1.3 GB
EGAF50000095500 fastq.gz 2.1 GB
EGAF50000095501 fastq.gz 39.9 GB
EGAF50000095502 fastq.gz 39.3 GB
EGAF50000095503 fastq.gz 125.8 GB
EGAF50000095504 bam 2.7 GB
EGAF50000095505 bam 507.8 MB
EGAF50000095506 bam 1.0 GB
EGAF50000095507 bam 1.3 GB
EGAF50000095508 bam 3.7 GB
EGAF50000095509 fastq.gz 2.0 GB
EGAF50000095510 fastq.gz 1.9 GB
EGAF50000095511 fastq.gz 1.9 GB
EGAF50000095512 fastq.gz 2.3 GB
EGAF50000095513 fastq.gz 2.4 GB
EGAF50000095514 fastq.gz 2.5 GB
EGAF50000095515 fastq.gz 1.7 GB
EGAF50000095516 fastq.gz 1.7 GB
EGAF50000095517 fastq.gz 1.7 GB
EGAF50000095518 fastq.gz 3.0 GB
EGAF50000095519 fastq.gz 3.0 GB
EGAF50000095520 fastq.gz 130.2 GB
EGAF50000095521 fastq.gz 129.4 GB
EGAF50000095522 fastq.gz 61.6 GB
EGAF50000095523 fastq.gz 1.1 GB
EGAF50000095524 bam 2.8 GB
EGAF50000095525 bam 3.0 GB
EGAF50000095526 bam 2.4 GB
EGAF50000095527 bam 16.6 kB
EGAF50000095528 bam 2.5 GB
EGAF50000095529 bam 1.1 GB
EGAF50000095530 bam 908.5 MB
EGAF50000095531 fastq.gz 922.0 MB
EGAF50000095532 fastq.gz 923.6 MB
EGAF50000095533 fastq.gz 1.9 GB
EGAF50000095534 fastq.gz 1.9 GB
EGAF50000095535 fastq.gz 1.6 GB
EGAF50000095536 fastq.gz 1.6 GB
EGAF50000095537 fastq.gz 974.6 MB
EGAF50000095538 fastq.gz 979.7 MB
EGAF50000095539 fastq.gz 1.0 GB
EGAF50000095540 fastq.gz 1.6 GB
EGAF50000095541 fastq.gz 1.9 GB
EGAF50000095542 fastq.gz 1.9 GB
EGAF50000095543 fastq.gz 691.5 MB
EGAF50000095544 fastq.gz 702.3 MB
EGAF50000095545 fastq.gz 1.2 GB
EGAF50000095546 fastq.gz 1.3 GB
EGAF50000095547 fastq.gz 2.0 GB
EGAF50000095548 fastq.gz 2.0 GB
EGAF50000095549 fastq.gz 869.3 MB
EGAF50000095550 fastq.gz 858.1 MB
EGAF50000095551 fastq.gz 2.6 GB
EGAF50000095552 fastq.gz 2.6 GB
EGAF50000095553 fastq.gz 3.0 GB
EGAF50000095554 fastq.gz 1.9 GB
EGAF50000095555 fastq.gz 1.9 GB
EGAF50000095556 fastq.gz 1.1 GB
EGAF50000095557 fastq.gz 1.1 GB
EGAF50000095558 fastq.gz 3.4 GB
EGAF50000095559 fastq.gz 1.2 GB
EGAF50000095560 fastq.gz 1.2 GB
EGAF50000095561 fastq.gz 1.2 GB
EGAF50000095562 fastq.gz 2.5 GB
EGAF50000095563 fastq.gz 664.7 MB
EGAF50000095564 fastq.gz 572.6 MB
EGAF50000095565 fastq.gz 566.8 MB
EGAF50000095566 fastq.gz 1.1 GB
EGAF50000095567 fastq.gz 1.1 GB
EGAF50000095568 fastq.gz 1.2 GB
EGAF50000095569 fastq.gz 1.2 GB
EGAF50000095570 fastq.gz 2.0 GB
EGAF50000095571 fastq.gz 2.0 GB
EGAF50000095572 fastq.gz 1.6 GB
EGAF50000095573 fastq.gz 1.6 GB
EGAF50000095574 fastq.gz 2.2 GB
EGAF50000095575 fastq.gz 2.2 GB
EGAF50000095576 fastq.gz 3.8 GB
EGAF50000095577 fastq.gz 637.7 MB
EGAF50000095578 fastq.gz 2.2 GB
EGAF50000095579 fastq.gz 2.2 GB
EGAF50000095580 fastq.gz 1.3 GB
EGAF50000095581 fastq.gz 1.1 GB
EGAF50000095582 fastq.gz 1.3 GB
EGAF50000095583 fastq.gz 1.1 GB
EGAF50000095584 fastq.gz 2.0 GB
EGAF50000095585 fastq.gz 2.0 GB
EGAF50000095586 fastq.gz 5.4 GB
EGAF50000095587 fastq.gz 796.8 MB
EGAF50000095588 fastq.gz 1.7 GB
EGAF50000095589 fastq.gz 1.3 GB
EGAF50000095590 fastq.gz 1.3 GB
EGAF50000095591 fastq.gz 1.1 GB
EGAF50000095592 fastq.gz 1.1 GB
EGAF50000095593 fastq.gz 1.2 GB
EGAF50000095594 fastq.gz 1.2 GB
EGAF50000095595 fastq.gz 8.2 GB
EGAF50000095596 fastq.gz 8.1 GB
EGAF50000095597 fastq.gz 1.7 GB
EGAF50000095598 fastq.gz 1.7 GB
EGAF50000095599 fastq.gz 1.7 GB
EGAF50000095600 fastq.gz 2.1 GB
EGAF50000095601 fastq.gz 3.1 GB
EGAF50000095602 fastq.gz 3.1 GB
EGAF50000095603 fastq.gz 2.9 GB
EGAF50000095604 fastq.gz 2.9 GB
EGAF50000095605 fastq.gz 1.3 GB
EGAF50000095606 fastq.gz 1.3 GB
EGAF50000095607 fastq.gz 1.4 GB
EGAF50000095608 fastq.gz 1.4 GB
EGAF50000095609 fastq.gz 2.2 GB
EGAF50000095610 fastq.gz 2.2 GB
EGAF50000095611 fastq.gz 2.6 GB
EGAF50000095612 fastq.gz 2.6 GB
EGAF50000095613 fastq.gz 3.5 GB
EGAF50000095614 fastq.gz 1.9 GB
EGAF50000095615 fastq.gz 1.8 GB
EGAF50000095616 fastq.gz 1.3 GB
EGAF50000095617 fastq.gz 1.3 GB
EGAF50000095618 fastq.gz 1.7 GB
EGAF50000095619 fastq.gz 1.7 GB
EGAF50000095620 fastq.gz 1.4 GB
EGAF50000095621 fastq.gz 1.4 GB
EGAF50000095622 fastq.gz 1.6 GB
EGAF50000095623 fastq.gz 1.6 GB
EGAF50000095624 fastq.gz 2.0 GB
EGAF50000095625 fastq.gz 4.6 GB
EGAF50000095626 fastq.gz 1.8 GB
EGAF50000095627 fastq.gz 1.4 GB
EGAF50000095628 fastq.gz 1.2 GB
EGAF50000095629 fastq.gz 1.2 GB
EGAF50000095630 fastq.gz 1.3 GB
EGAF50000095631 fastq.gz 1.4 GB
EGAF50000095632 fastq.gz 1.8 GB
EGAF50000095633 fastq.gz 1.1 GB
EGAF50000095634 fastq.gz 1.3 GB
EGAF50000095635 fastq.gz 1.4 GB
EGAF50000095636 fastq.gz 3.0 GB
EGAF50000095637 fastq.gz 3.0 GB
EGAF50000095638 fastq.gz 10.8 GB
EGAF50000095639 bam 1.6 GB
EGAF50000095640 bam 112.2 MB
EGAF50000095641 bam 2.5 GB
EGAF50000095642 bam 371.4 MB
EGAF50000095643 bam 1.6 GB
EGAF50000095644 bam 509.2 MB
EGAF50000095645 bam 90.9 MB
EGAF50000095646 bam 3.4 GB
EGAF50000095647 bam 2.3 GB
EGAF50000095648 bam 1.2 GB
EGAF50000095649 fastq.gz 1.4 GB
EGAF50000095650 fastq.gz 1.4 GB
EGAF50000095651 fastq.gz 5.5 GB
EGAF50000095652 fastq.gz 5.5 GB
EGAF50000095653 fastq.gz 1.4 GB
EGAF50000095654 fastq.gz 1.3 GB
EGAF50000095655 fastq.gz 2.8 GB
EGAF50000095656 fastq.gz 2.8 GB
EGAF50000095657 fastq.gz 5.4 GB
EGAF50000095658 fastq.gz 1.3 GB
EGAF50000095659 fastq.gz 2.0 GB
EGAF50000095660 fastq.gz 732.9 MB
EGAF50000095661 bam 528.9 MB
EGAF50000095662 bam 1.7 GB
EGAF50000095663 bam 256.0 MB
EGAF50000095664 bam 2.1 GB
EGAF50000095665 bam 2.1 GB
EGAF50000095666 bam 3.7 GB
EGAF50000095667 bam 4.0 GB
EGAF50000095668 bam 3.9 GB
EGAF50000095669 bam 4.7 GB
EGAF50000095670 bam 3.5 GB
EGAF50000095671 bam 3.6 GB
EGAF50000095672 bam 3.2 GB
EGAF50000095673 bam 2.2 GB
EGAF50000095674 bam 24.6 kB
EGAF50000095675 bam 4.4 GB
EGAF50000095676 fastq.gz 1.5 GB
EGAF50000095677 fastq.gz 1.5 GB
EGAF50000095678 fastq.gz 1.5 GB
EGAF50000095679 bam 3.6 GB
EGAF50000095680 bam 14.1 GB
EGAF50000095681 bam 5.8 GB
EGAF50000095682 bam 5.3 GB
EGAF50000095683 bam 5.7 GB
EGAF50000095684 fastq.gz 2.7 GB
EGAF50000095685 fastq.gz 2.8 GB
EGAF50000095686 fastq.gz 1.0 GB
EGAF50000095687 fastq.gz 1.3 GB
EGAF50000095688 bam 2.9 GB
EGAF50000095689 bam 3.0 GB
EGAF50000095690 bam 5.1 GB
EGAF50000095691 bam 5.0 GB
EGAF50000095692 bam 4.8 GB
EGAF50000095693 bam 5.0 GB
EGAF50000095694 bam 4.6 GB
EGAF50000095695 bam 4.3 GB
EGAF50000095696 bam 3.8 GB
EGAF50000095697 bam 4.8 GB
EGAF50000095698 bam 5.2 GB
EGAF50000095699 bam 3.9 GB
EGAF50000095700 bam 5.4 GB
EGAF50000095701 bam 4.5 GB
EGAF50000095702 bam 3.5 GB
EGAF50000095703 bam 4.0 GB
EGAF50000095704 bam 3.7 GB
EGAF50000095705 bam 4.9 GB
EGAF50000095706 bam 3.0 GB
EGAF50000095707 bam 4.4 GB
EGAF50000095708 bam 897.3 MB
EGAF50000095709 bam 131.5 MB
EGAF50000095710 bam 94.0 MB
EGAF50000095711 bam 208.0 MB
EGAF50000095712 fastq.gz 2.0 GB
EGAF50000095713 fastq.gz 2.0 GB
EGAF50000095714 fastq.gz 3.2 GB
EGAF50000095715 fastq.gz 3.2 GB
EGAF50000095716 fastq.gz 2.2 GB
EGAF50000095717 fastq.gz 2.2 GB
EGAF50000095718 fastq.gz 2.3 GB
EGAF50000095719 fastq.gz 2.3 GB
EGAF50000095720 fastq.gz 2.3 GB
EGAF50000095721 fastq.gz 2.4 GB
EGAF50000095722 fastq.gz 3.3 GB
EGAF50000095723 fastq.gz 3.3 GB
EGAF50000095724 fastq.gz 1.9 GB
EGAF50000095725 fastq.gz 1.9 GB
EGAF50000095726 fastq.gz 3.1 GB
EGAF50000095727 fastq.gz 3.2 GB
EGAF50000095728 fastq.gz 2.0 GB
EGAF50000095729 fastq.gz 2.0 GB
EGAF50000095730 fastq.gz 2.0 GB
EGAF50000095731 fastq.gz 2.0 GB
EGAF50000095732 fastq.gz 2.8 GB
EGAF50000095733 fastq.gz 2.8 GB
EGAF50000095734 fastq.gz 1.7 GB
EGAF50000095735 fastq.gz 130.5 GB
EGAF50000095736 fastq.gz 136.2 GB
EGAF50000095737 fastq.gz 143.1 GB
EGAF50000095738 fastq.gz 41.0 GB
EGAF50000095739 fastq.gz 132.2 GB
EGAF50000095740 fastq.gz 137.8 GB
EGAF50000095741 fastq.gz 142.2 GB
EGAF50000095742 fastq.gz 49.3 GB
EGAF50000095743 fastq.gz 143.2 GB
EGAF50000095744 fastq.gz 151.2 GB
EGAF50000095745 fastq.gz 59.2 GB
EGAF50000095746 fastq.gz 59.5 GB
EGAF50000095747 bam 3.2 GB
EGAF50000095748 bam 1.6 GB
EGAF50000095749 bam 4.1 GB
EGAF50000095750 bam 3.9 GB
EGAF50000095751 bam 3.6 GB
EGAF50000095752 bam 4.4 GB
EGAF50000095753 bam 961.4 MB
EGAF50000095754 bam 2.5 GB
EGAF50000095755 bam 5.3 GB
EGAF50000095756 bam 5.5 GB
EGAF50000095757 bam 4.9 GB
EGAF50000095758 bam 5.3 GB
EGAF50000095759 bam 3.0 GB
EGAF50000095760 bam 3.8 GB
EGAF50000095761 fastq.gz 120.3 GB
EGAF50000095762 fastq.gz 126.5 GB
EGAF50000095763 fastq.gz 55.7 GB
EGAF50000095764 fastq.gz 158.7 GB
EGAF50000095765 fastq.gz 2.3 GB
EGAF50000095766 fastq.gz 1.2 GB
EGAF50000095767 fastq.gz 3.5 GB
EGAF50000095768 fastq.gz 1.5 GB
EGAF50000095769 fastq.gz 1.8 GB
EGAF50000095770 fastq.gz 1.4 GB
EGAF50000095771 fastq.gz 1.5 GB
EGAF50000095772 fastq.gz 2.0 GB
EGAF50000095773 fastq.gz 1.9 GB
EGAF50000095774 fastq.gz 2.3 GB
EGAF50000095775 fastq.gz 1.2 GB
EGAF50000095776 fastq.gz 144.4 GB
EGAF50000095777 fastq.gz 151.4 GB
EGAF50000095778 bam 2.4 GB
EGAF50000095779 bam 3.6 GB
EGAF50000095780 bam 3.9 GB
EGAF50000095781 bam 2.5 GB
EGAF50000095782 fastq.gz 2.7 GB
EGAF50000095783 fastq.gz 2.7 GB
EGAF50000095784 bam 574.1 MB
EGAF50000095785 bam 851.7 MB
EGAF50000095786 fastq.gz 132.5 GB
EGAF50000095787 fastq.gz 143.3 GB
EGAF50000095788 fastq.gz 149.6 GB
EGAF50000095789 fastq.gz 65.4 GB
EGAF50000095790 fastq.gz 55.0 GB
EGAF50000095791 bam 1.3 GB
EGAF50000095792 bam 4.8 GB
EGAF50000095793 bam 1.8 GB
EGAF50000095794 fastq.gz 1.6 GB
EGAF50000095795 fastq.gz 4.6 GB
414 Files (6.6 TB)