WGS data of patient derived organoids (PDO) generated from dMMR colorectal tumor subclones
The dataset includes bam files from WGS of 26 monoclonal patient derived organoid (PDO) lines isolated from 6 independent tumor subclones of a dMMR colorectal tumor. These organoids were grown as part of an in vitro timecourse experiment for the duration of 9 weeks; bam files represent the mutational load at the start of the timecourse (t0) and the end of the timecourse (t1).
- 23/04/2024
- 53 samples
- DAC: EGAC00001000432
- Technology: Illumina NovaSeq 6000
- DS DUO:0000007 (version: 2021-02-23)disease specific researchThis data use permission indicates that use is allowed provided it is related to the specified disease.ModifiersMONDO:0004992
- PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
Policy for study WGS data of patient derived organoids (PDO) generated from dMMR colorectal tumor subclones
Policy for dataset 'WGS data of patient derived organoids (PDO) generated from dMMR colorectal tumor subclones'
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000297 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000099501 | 28.7 GB | |||
| EGAF50000099502 | 31.9 GB | |||
| EGAF50000099503 | 29.1 GB | |||
| EGAF50000099504 | 28.8 GB | |||
| EGAF50000099505 | 28.3 GB | |||
| EGAF50000099506 | 30.5 GB | |||
| EGAF50000099507 | 30.6 GB | |||
| EGAF50000099508 | 30.6 GB | |||
| EGAF50000099509 | 48.3 GB | |||
| EGAF50000099510 | 45.1 GB | |||
| EGAF50000099511 | 47.9 GB | |||
| EGAF50000099512 | 40.5 GB | |||
| EGAF50000099513 | 29.8 GB | |||
| EGAF50000099514 | 28.6 GB | |||
| EGAF50000099515 | 27.6 GB | |||
| EGAF50000099516 | 29.9 GB | |||
| EGAF50000099517 | 28.2 GB | |||
| EGAF50000099518 | 28.9 GB | |||
| EGAF50000099519 | 28.2 GB | |||
| EGAF50000099520 | 29.9 GB | |||
| EGAF50000099521 | 29.0 GB | |||
| EGAF50000099522 | 29.1 GB | |||
| EGAF50000099523 | 29.6 GB | |||
| EGAF50000099524 | 28.0 GB | |||
| EGAF50000099525 | 29.1 GB | |||
| EGAF50000099526 | 46.4 GB | |||
| EGAF50000099527 | 53.1 GB | |||
| EGAF50000099528 | 43.1 GB | |||
| EGAF50000099529 | 51.5 GB | |||
| EGAF50000099530 | 49.6 GB | |||
| EGAF50000099531 | 48.6 GB | |||
| EGAF50000099532 | 43.1 GB | |||
| EGAF50000099533 | 46.2 GB | |||
| EGAF50000099534 | 43.4 GB | |||
| EGAF50000099535 | 41.0 GB | |||
| EGAF50000099536 | 45.4 GB | |||
| EGAF50000099537 | 41.7 GB | |||
| EGAF50000099538 | 30.0 GB | |||
| EGAF50000099539 | 28.5 GB | |||
| EGAF50000099540 | 28.6 GB | |||
| EGAF50000099541 | 28.6 GB | |||
| EGAF50000099542 | 29.5 GB | |||
| EGAF50000099543 | 28.2 GB | |||
| EGAF50000099544 | 28.2 GB | |||
| EGAF50000099545 | 26.5 GB | |||
| EGAF50000099546 | 29.9 GB | |||
| EGAF50000099547 | 29.4 GB | |||
| EGAF50000099548 | 30.8 GB | |||
| EGAF50000099549 | 26.5 GB | |||
| EGAF50000099550 | 28.5 GB | |||
| EGAF50000099551 | 30.9 GB | |||
| EGAF50000099552 | 29.0 GB | |||
| EGAF50000099553 | 27.9 GB | |||
| 53 Files (1.8 TB) | ||||