Single-cell characterization of human GBM reveals regional differences in tumor-infiltrating leukocyte activation
Raw sequencing files from scRNA-seq dataset used in Schmassmann et al. 2023. Single-cell characterization of human GBM reveals regional differences in tumor-infiltrating leukocyte activation. Elife 12 (https://elifesciences.org/articles/92678) Dataset content: 14 samples from 5 donors File type: paired-end fastq files Technology: Illumina sequencing Experimentation used: scRNA-seq using the 10X technology
- 17/04/2024
- 14 samples
- DAC: EGAC00001002981
- Technology: Illumina HiSeq 4000
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ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requested datasets. You can find the governing policy on Zenodo under the link: https://zenodo.org/records/12517622 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000302 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000099995 | 2.4 GB | |||
| EGAF50000099996 | 1.0 GB | |||
| EGAF50000099997 | 2.3 GB | |||
| EGAF50000099998 | 2.3 GB | |||
| EGAF50000099999 | 2.2 GB | |||
| EGAF50000100000 | 2.2 GB | |||
| EGAF50000100001 | 1.0 GB | |||
| EGAF50000100002 | 1.0 GB | |||
| EGAF50000100003 | 2.0 GB | |||
| EGAF50000100004 | 183.6 MB | |||
| EGAF50000100005 | 370.9 MB | |||
| EGAF50000100006 | 979.0 MB | |||
| EGAF50000100007 | 2.0 GB | |||
| EGAF50000100008 | 969.0 MB | |||
| EGAF50000100009 | 2.4 GB | |||
| EGAF50000100010 | 1.1 GB | |||
| EGAF50000100011 | 234.5 MB | |||
| EGAF50000100012 | 1.0 GB | |||
| EGAF50000100013 | 2.2 GB | |||
| EGAF50000100014 | 239.5 MB | |||
| EGAF50000100015 | 1.0 GB | |||
| EGAF50000100016 | 1.0 GB | |||
| EGAF50000100017 | 1.0 GB | |||
| EGAF50000100018 | 1.0 GB | |||
| EGAF50000100019 | 1.0 GB | |||
| EGAF50000100020 | 555.6 MB | |||
| EGAF50000100021 | 1.2 GB | |||
| EGAF50000100022 | 1.1 GB | |||
| EGAF50000100023 | 1.1 GB | |||
| EGAF50000100024 | 1.1 GB | |||
| EGAF50000100025 | 2.3 GB | |||
| EGAF50000100026 | 1.1 GB | |||
| EGAF50000100027 | 2.3 GB | |||
| EGAF50000100028 | 1.1 GB | |||
| EGAF50000100029 | 1.1 GB | |||
| EGAF50000100030 | 479.7 MB | |||
| EGAF50000100031 | 2.0 GB | |||
| EGAF50000100032 | 993.1 MB | |||
| EGAF50000100033 | 2.1 GB | |||
| EGAF50000100034 | 993.7 MB | |||
| EGAF50000100035 | 2.0 GB | |||
| EGAF50000100036 | 991.7 MB | |||
| EGAF50000100037 | 80.0 MB | |||
| EGAF50000100038 | 1.1 GB | |||
| EGAF50000100039 | 2.2 GB | |||
| EGAF50000100040 | 1.0 GB | |||
| EGAF50000100041 | 2.2 GB | |||
| EGAF50000100042 | 1.0 GB | |||
| EGAF50000100043 | 1.0 GB | |||
| EGAF50000100044 | 1.0 GB | |||
| EGAF50000100045 | 1.0 GB | |||
| EGAF50000100046 | 231.0 MB | |||
| EGAF50000100047 | 1.0 GB | |||
| EGAF50000100048 | 1.0 GB | |||
| EGAF50000100049 | 2.3 GB | |||
| EGAF50000100050 | 107.4 MB | |||
| EGAF50000100051 | 238.7 MB | |||
| EGAF50000100052 | 1.0 GB | |||
| EGAF50000100053 | 2.1 GB | |||
| EGAF50000100054 | 987.7 MB | |||
| EGAF50000100055 | 2.1 GB | |||
| EGAF50000100056 | 992.0 MB | |||
| EGAF50000100057 | 2.1 GB | |||
| EGAF50000100058 | 630.8 MB | |||
| EGAF50000100059 | 1.3 GB | |||
| EGAF50000100060 | 996.6 MB | |||
| EGAF50000100061 | 996.9 MB | |||
| EGAF50000100062 | 996.0 MB | |||
| EGAF50000100063 | 2.1 GB | |||
| EGAF50000100064 | 755.5 MB | |||
| EGAF50000100065 | 1.6 GB | |||
| EGAF50000100066 | 1.1 GB | |||
| EGAF50000100067 | 2.3 GB | |||
| EGAF50000100068 | 1.0 GB | |||
| EGAF50000100069 | 1.0 GB | |||
| EGAF50000100070 | 2.3 GB | |||
| EGAF50000100071 | 1.0 GB | |||
| EGAF50000100072 | 2.3 GB | |||
| EGAF50000100073 | 984.8 MB | |||
| EGAF50000100074 | 2.0 GB | |||
| EGAF50000100075 | 969.8 MB | |||
| EGAF50000100076 | 2.0 GB | |||
| EGAF50000100077 | 152.0 MB | |||
| EGAF50000100078 | 1.1 GB | |||
| EGAF50000100079 | 2.4 GB | |||
| EGAF50000100080 | 778.7 MB | |||
| EGAF50000100081 | 1.7 GB | |||
| EGAF50000100082 | 1.0 GB | |||
| EGAF50000100083 | 1.1 GB | |||
| EGAF50000100084 | 1.0 GB | |||
| EGAF50000100085 | 2.2 GB | |||
| EGAF50000100086 | 1.0 GB | |||
| EGAF50000100087 | 2.2 GB | |||
| EGAF50000100088 | 1.0 GB | |||
| EGAF50000100089 | 2.2 GB | |||
| EGAF50000100090 | 1.0 GB | |||
| EGAF50000100091 | 2.2 GB | |||
| EGAF50000100092 | 1.0 GB | |||
| EGAF50000100093 | 2.2 GB | |||
| EGAF50000100094 | 1.0 GB | |||
| EGAF50000100095 | 2.2 GB | |||
| EGAF50000100096 | 60.2 MB | |||
| EGAF50000100097 | 129.5 MB | |||
| EGAF50000100098 | 1.0 GB | |||
| EGAF50000100099 | 2.2 GB | |||
| EGAF50000100100 | 2.2 GB | |||
| EGAF50000100101 | 2.2 GB | |||
| EGAF50000100102 | 2.2 GB | |||
| EGAF50000100103 | 2.2 GB | |||
| EGAF50000100104 | 2.2 GB | |||
| EGAF50000100105 | 2.2 GB | |||
| EGAF50000100106 | 2.3 GB | |||
| EGAF50000100107 | 2.3 GB | |||
| EGAF50000100108 | 1.0 GB | |||
| EGAF50000100109 | 1.0 GB | |||
| EGAF50000100110 | 1.1 GB | |||
| EGAF50000100111 | 1.1 GB | |||
| EGAF50000100112 | 1.1 GB | |||
| EGAF50000100113 | 522.2 MB | |||
| EGAF50000100114 | 1.0 GB | |||
| EGAF50000100115 | 2.2 GB | |||
| EGAF50000100116 | 2.2 GB | |||
| EGAF50000100117 | 2.2 GB | |||
| EGAF50000100118 | 2.2 GB | |||
| EGAF50000100119 | 485.5 MB | |||
| EGAF50000100120 | 2.3 GB | |||
| EGAF50000100121 | 2.2 GB | |||
| EGAF50000100122 | 2.3 GB | |||
| EGAF50000100123 | 2.0 GB | |||
| EGAF50000100124 | 2.0 GB | |||
| EGAF50000100125 | 566.6 MB | |||
| EGAF50000100126 | 2.2 GB | |||
| EGAF50000100127 | 2.4 GB | |||
| EGAF50000100128 | 2.4 GB | |||
| EGAF50000100129 | 2.4 GB | |||
| EGAF50000100130 | 2.1 GB | |||
| EGAF50000100131 | 166.8 MB | |||
| EGAF50000100132 | 1.0 GB | |||
| EGAF50000100133 | 2.3 GB | |||
| EGAF50000100134 | 1.0 GB | |||
| EGAF50000100135 | 2.1 GB | |||
| EGAF50000100136 | 996.6 MB | |||
| EGAF50000100137 | 2.1 GB | |||
| EGAF50000100138 | 2.1 GB | |||
| EGAF50000100139 | 2.1 GB | |||
| EGAF50000100140 | 999.7 MB | |||
| EGAF50000100141 | 2.0 GB | |||
| EGAF50000100142 | 985.0 MB | |||
| EGAF50000100143 | 2.0 GB | |||
| EGAF50000100144 | 308.5 MB | |||
| EGAF50000100145 | 2.2 GB | |||
| EGAF50000100146 | 2.0 GB | |||
| EGAF50000100147 | 984.7 MB | |||
| EGAF50000100148 | 985.1 MB | |||
| EGAF50000100149 | 277.1 MB | |||
| EGAF50000100150 | 1.0 GB | |||
| EGAF50000100151 | 505.9 MB | |||
| EGAF50000100152 | 1.0 GB | |||
| EGAF50000100153 | 2.2 GB | |||
| EGAF50000100154 | 1.1 GB | |||
| 160 Files (226.4 GB) | ||||