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Genetic landscape of Extranodal NK/T-cell lymphoma

Targeted-capture sequencing data from 168 ENKTCL patients

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Division of Molecular Oncology National Cancer Center Research Institute Data Access Committee DATA ACCESS AGREEMENT

Division of Molecular Oncology National Cancer Center Research Institute Data Access Committee DATA ACCESS AGREEMENT This Data Access Agreement (“Agreement”) governs the terms on which access will be granted to the genotype/expression array/sequence data generated by the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee. In signing this Agreement, the User agrees to be bound by the terms and conditions of access set out in this Agreement. For the sake of clarity, the terms of access set out in this Agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the Agreement as “You” and “Your” shall be construed accordingly. Definitions: Project team means Division of Molecular Oncology, National Cancer Center Research Institute, Tokyo, Japan. Data means all genetic data set of patients with extranodal NK/T-cell lymphoma, obtained from the Project team. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the Data or any part thereof for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the Data provided under this Agreement to other information or archive Data available for the data sets provided, even if access to that Data has been formally granted to You, or it is freely available without restriction, without specific permission being sought from the relevant access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the Data for the approved purpose and project described in Your application; use of the Data for a new purpose or project will require a new application and approval. 7. A Data access account using a non-institutional email address is established if You agree to notify EGA and the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee within 30 days of any changes of, or departures from the institution specified in Your application. 8. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 9. You agree to abide by the terms outlined in the Project team 'Publications Policy' as set out in Schedule 1. 10. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the Data, and the role of the Project team. Suitable wording is provided in the Publications Policy given in Schedule 1. 11. You accept that the Project team, the original Data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 12. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 13. You recognise that nothing in this Agreement shall operate to transfer to You any intellectual property rights relating to the Data. You have the right to develop intellectual property based on comparisons with Your own data. 14. You agree not to make intellectual property claims on the Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of the Data, or conclusion drawn directly from the Data. 15. You can elect to perform further research that would add intellectual and resource capital to the Data and decide to obtain intellectual property rights on these downstream discoveries. In this case, You agree to implement licensing policies that will not obstruct further research, and follow the U.S. National Institutes of Health’s, Best Practices for the Licensing of Genomic Inventions or a similar national guideline that is in conformity with the OECD, Guidelines for the Licensing of the Genetic Inventions. 16. You agree to notify the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee in writing of any new intellectual property. You agree to, on request, provide a non-exclusive, royalty-free licence to the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee for their own research and educational uses. 17. You accept that this Agreement will terminate immediately upon any breach of this Agreement by You and You will be required to destroy any Data held. 18. You accept that it may be necessary for the Project team or its appointed agent to alter the terms of this Agreement from time to time in order to address new concerns. In this event, the Project team or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 19. Access to the Data is granted for a period of 2 years. Where it is necessary to extend the period of access, You agree to contact the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee, in advance of the expiry of the period of access. At the end of the period of access, You agree to destroy all copies of the Data, except as required by publication practices or law to retain them. 20. You agree that You will submit a report to the Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee, if requested, on completion of the agreed purpose. The Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to You. 21. You accept that the Data is protected by and subject to international laws and that You are responsible for ensuring compliance with any such applicable law. The Division of Molecular Oncology, National Cancer Center Research Institute Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in Japan. 22. This Agreement shall be governed by, and construed and interpreted under the laws of Japan. All dispute pertaining to this Agreement shall be subject to the exclusive jurisdiction of the Tokyo District Court of Japan for the first instance.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006906 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000101156 bam 1.8 GB Report
EGAF50000101157 bam 1.9 GB Report
EGAF50000101158 bam 1.9 GB Report
EGAF50000101159 bam 1.8 GB Report
EGAF50000101160 bam 2.0 GB Report
EGAF50000101161 bam 1.6 GB Report
EGAF50000101162 bam 1.8 GB Report
EGAF50000101163 bam 2.0 GB Report
EGAF50000101164 bam 2.2 GB Report
EGAF50000101165 bam 1.6 GB Report
EGAF50000101166 bam 1.5 GB Report
EGAF50000101167 bam 1.5 GB Report
EGAF50000101168 bam 1.4 GB Report
EGAF50000101169 bam 1.5 GB Report
EGAF50000101170 bam 1.5 GB Report
EGAF50000101171 bam 1.3 GB Report
EGAF50000101172 bam 1.5 GB Report
EGAF50000101173 bam 11.8 GB Report
EGAF50000101174 bam 14.3 GB Report
EGAF50000101175 bam 1.4 GB Report
EGAF50000101176 bam 1.6 GB Report
EGAF50000101177 bam 1.7 GB Report
EGAF50000101178 bam 1.5 GB Report
EGAF50000101179 bam 1.5 GB Report
EGAF50000101180 bam 1.4 GB Report
EGAF50000101181 bam 1.5 GB Report
EGAF50000101182 bam 1.4 GB Report
EGAF50000101183 bam 1.4 GB Report
EGAF50000101184 bam 9.7 GB Report
EGAF50000101185 bam 1.4 GB Report
EGAF50000101186 bam 2.0 GB Report
EGAF50000101187 bam 1.4 GB Report
EGAF50000101188 bam 1.7 GB Report
EGAF50000101189 bam 1.4 GB Report
EGAF50000101190 bam 1.6 GB Report
EGAF50000101191 bam 1.4 GB Report
EGAF50000101192 bam 1.5 GB Report
EGAF50000101193 bam 9.3 GB Report
EGAF50000101194 bam 11.5 GB Report
EGAF50000101195 bam 1.6 GB Report
EGAF50000101196 bam 1.4 GB Report
EGAF50000101197 bam 1.7 GB Report
EGAF50000101198 bam 1.5 GB Report
EGAF50000101199 bam 1.4 GB Report
EGAF50000101200 bam 1.5 GB Report
EGAF50000101201 bam 9.3 GB Report
EGAF50000101202 bam 1.6 GB Report
EGAF50000101203 bam 1.7 GB Report
EGAF50000101204 bam 1.5 GB Report
EGAF50000101205 bam 1.5 GB Report
EGAF50000101206 bam 1.5 GB Report
EGAF50000101207 bam 1.8 GB Report
EGAF50000101208 bam 1.8 GB Report
EGAF50000101209 bam 3.3 GB Report
EGAF50000101210 bam 1.7 GB Report
EGAF50000101211 bam 4.4 GB Report
EGAF50000101212 bam 2.5 GB Report
EGAF50000101213 bam 1.7 GB Report
EGAF50000101214 bam 2.3 GB Report
EGAF50000101215 bam 1.8 GB Report
EGAF50000101216 bam 2.8 GB Report
EGAF50000101217 bam 2.6 GB Report
EGAF50000101218 bam 1.1 GB Report
EGAF50000101219 bam 3.4 GB Report
EGAF50000101220 bam 2.9 GB Report
EGAF50000101221 bam 1.7 GB Report
EGAF50000101222 bam 2.3 GB Report
EGAF50000101223 bam 1.9 GB Report
EGAF50000101224 bam 2.1 GB Report
EGAF50000101225 bam 2.0 GB Report
EGAF50000101226 bam 1.9 GB Report
EGAF50000101227 bam 1.3 GB Report
EGAF50000101228 bam 1.8 GB Report
EGAF50000101229 bam 1.7 GB Report
EGAF50000101230 bam 1.4 GB Report
EGAF50000101231 bam 1.6 GB Report
EGAF50000101232 bam 1.8 GB Report
EGAF50000101233 bam 1.4 GB Report
EGAF50000101234 bam 1.8 GB Report
EGAF50000101235 bam 1.7 GB Report
EGAF50000101236 bam 1.8 GB Report
EGAF50000101237 bam 1.6 GB Report
EGAF50000101238 bam 1.6 GB Report
EGAF50000101239 bam 1.8 GB Report
EGAF50000101240 bam 1.6 GB Report
EGAF50000101241 bam 1.6 GB Report
EGAF50000101242 bam 1.5 GB Report
EGAF50000101243 bam 2.0 GB Report
EGAF50000101244 bam 2.0 GB Report
EGAF50000101245 bam 1.8 GB Report
EGAF50000101246 bam 1.8 GB Report
EGAF50000101247 bam 1.6 GB Report
EGAF50000101248 bam 1.8 GB Report
EGAF50000101249 bam 1.6 GB Report
EGAF50000101250 bam 1.8 GB Report
EGAF50000101251 bam 1.9 GB Report
EGAF50000101252 bam 3.9 GB Report
EGAF50000101253 bam 1.8 GB Report
EGAF50000101254 bam 1.9 GB Report
EGAF50000101255 bam 1.8 GB Report
EGAF50000101256 bam 1.7 GB Report
EGAF50000101257 bam 1.6 GB Report
EGAF50000101258 bam 2.0 GB Report
EGAF50000101259 bam 2.2 GB Report
EGAF50000101260 bam 1.9 GB Report
EGAF50000101261 bam 1.9 GB Report
EGAF50000101262 bam 1.9 GB Report
EGAF50000101263 bam 1.5 GB Report
EGAF50000101264 bam 1.8 GB Report
EGAF50000101265 bam 2.1 GB Report
EGAF50000101266 bam 2.2 GB Report
EGAF50000101267 bam 2.1 GB Report
EGAF50000101268 bam 1.6 GB Report
EGAF50000101269 bam 1.5 GB Report
EGAF50000101270 bam 1.5 GB Report
EGAF50000101271 bam 1.7 GB Report
EGAF50000101272 bam 1.4 GB Report
EGAF50000101273 bam 1.5 GB Report
EGAF50000101274 bam 1.7 GB Report
EGAF50000101275 bam 2.1 GB Report
EGAF50000101276 bam 1.6 GB Report
EGAF50000101277 bam 1.7 GB Report
EGAF50000101278 bam 1.7 GB Report
EGAF50000101279 bam 1.8 GB Report
EGAF50000101280 bam 1.7 GB Report
EGAF50000101281 bam 1.8 GB Report
EGAF50000101282 bam 1.6 GB Report
EGAF50000101283 bam 1.7 GB Report
EGAF50000101284 bam 1.6 GB Report
EGAF50000101285 bam 1.6 GB Report
EGAF50000101286 bam 1.8 GB Report
EGAF50000101287 bam 1.8 GB Report
EGAF50000101288 bam 1.7 GB Report
EGAF50000101289 bam 1.6 GB Report
EGAF50000101290 bam 1.9 GB Report
EGAF50000101291 bam 1.3 GB Report
EGAF50000101292 bam 1.4 GB Report
EGAF50000101293 bam 1.7 GB Report
EGAF50000101294 bam 1.7 GB Report
EGAF50000101295 bam 1.7 GB Report
EGAF50000101296 bam 1.4 GB Report
EGAF50000101297 bam 1.7 GB Report
EGAF50000101298 bam 2.0 GB Report
EGAF50000101299 bam 1.7 GB Report
EGAF50000101300 bam 1.6 GB Report
EGAF50000101301 bam 2.1 GB Report
EGAF50000101302 bam 1.9 GB Report
EGAF50000101303 bam 2.9 GB Report
EGAF50000101304 bam 3.2 GB Report
EGAF50000101305 bam 4.1 GB Report
EGAF50000101306 bam 2.8 GB Report
EGAF50000101307 bam 1.1 GB Report
EGAF50000101308 bam 2.1 GB Report
EGAF50000101309 bam 1.5 GB Report
EGAF50000101310 bam 2.5 GB Report
EGAF50000101311 bam 1.2 GB Report
EGAF50000101312 bam 1.9 GB Report
EGAF50000101313 bam 1.9 GB Report
EGAF50000101314 bam 2.3 GB Report
EGAF50000101315 bam 2.7 GB Report
EGAF50000101316 bam 2.2 GB Report
EGAF50000101317 bam 2.3 GB Report
EGAF50000101318 bam 3.9 GB Report
EGAF50000101319 bam 2.5 GB Report
EGAF50000101320 bam 2.5 GB Report
EGAF50000101321 bam 2.7 GB Report
EGAF50000101322 bam 2.4 GB Report
EGAF50000101323 bam 1.2 GB Report
168 Files (366.6 GB)