Bulk RNA-seq of monocytes and in vitro cultured monocyte-derived macrophages of ANCA-associated vasculitis patients with active and stable disease and healthy controls
To study monocyte and macrophage activation in ANCA-associtated vasculitis (AAV), we performed bulk RNA sequencing of bead-selected monocytes and in vitro cultured monocyte-derived macrophages from AAV patients and healthy controls. Overview patients included for sequencing monocytes: - AAV active disease, n=4, MPO-AAV=4 - AAV remission, n=10, PR3-AAV=5, MPO-AAV=5 - Healthy controls, n=6 Overview patients included for sequencing monocyte-derived macrophages: - AAV active, n=1, PR3-AAV=1 - AAV remission, n=3, PR3-AAV=3 - Healthy controls, n=3
- 10/05/2024
- 48 samples
- DAC: EGAC50000000024
- Technology: Illumina NovaSeq 6000
Data Access Policy Immuno-nephrology DAC Amsterdam UMC
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000311 | Transcriptome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000101426 | fastq.gz | 3.0 GB | ||
| EGAF50000101427 | fastq.gz | 3.0 GB | ||
| EGAF50000101428 | fastq.gz | 4.9 GB | ||
| EGAF50000101429 | fastq.gz | 5.0 GB | ||
| EGAF50000101430 | fastq.gz | 4.6 GB | ||
| EGAF50000101431 | fastq.gz | 4.5 GB | ||
| EGAF50000101432 | fastq.gz | 3.3 GB | ||
| EGAF50000101433 | fastq.gz | 3.4 GB | ||
| EGAF50000101434 | fastq.gz | 4.5 GB | ||
| EGAF50000101435 | fastq.gz | 4.6 GB | ||
| EGAF50000101436 | fastq.gz | 3.3 GB | ||
| EGAF50000101437 | fastq.gz | 3.4 GB | ||
| EGAF50000101438 | fastq.gz | 6.0 GB | ||
| EGAF50000101439 | fastq.gz | 6.2 GB | ||
| EGAF50000101440 | fastq.gz | 3.2 GB | ||
| EGAF50000101441 | fastq.gz | 3.3 GB | ||
| EGAF50000101442 | fastq.gz | 3.1 GB | ||
| EGAF50000101443 | fastq.gz | 3.0 GB | ||
| EGAF50000101444 | fastq.gz | 3.5 GB | ||
| EGAF50000101445 | fastq.gz | 3.6 GB | ||
| EGAF50000101446 | fastq.gz | 2.5 GB | ||
| EGAF50000101447 | fastq.gz | 2.6 GB | ||
| EGAF50000101448 | fastq.gz | 3.5 GB | ||
| EGAF50000101449 | fastq.gz | 3.4 GB | ||
| EGAF50000101450 | fastq.gz | 3.3 GB | ||
| EGAF50000101451 | fastq.gz | 3.4 GB | ||
| EGAF50000101452 | fastq.gz | 3.4 GB | ||
| EGAF50000101453 | fastq.gz | 3.5 GB | ||
| EGAF50000101454 | fastq.gz | 4.9 GB | ||
| EGAF50000101455 | fastq.gz | 5.1 GB | ||
| EGAF50000101456 | fastq.gz | 7.9 GB | ||
| EGAF50000101457 | fastq.gz | 8.3 GB | ||
| EGAF50000101458 | fastq.gz | 5.4 GB | ||
| EGAF50000101459 | fastq.gz | 5.3 GB | ||
| EGAF50000101460 | fastq.gz | 2.8 GB | ||
| EGAF50000101461 | fastq.gz | 2.9 GB | ||
| EGAF50000101462 | fastq.gz | 3.3 GB | ||
| EGAF50000101463 | fastq.gz | 3.2 GB | ||
| EGAF50000101464 | fastq.gz | 4.4 GB | ||
| EGAF50000101465 | fastq.gz | 4.4 GB | ||
| EGAF50000101466 | fastq.gz | 3.2 GB | ||
| EGAF50000101467 | fastq.gz | 3.3 GB | ||
| EGAF50000101468 | fastq.gz | 3.9 GB | ||
| EGAF50000101469 | fastq.gz | 4.0 GB | ||
| EGAF50000101470 | fastq.gz | 3.8 GB | ||
| EGAF50000101471 | fastq.gz | 3.9 GB | ||
| EGAF50000101472 | fastq.gz | 4.1 GB | ||
| EGAF50000101473 | fastq.gz | 4.2 GB | ||
| EGAF50000101474 | fastq.gz | 5.2 GB | ||
| EGAF50000101475 | fastq.gz | 5.3 GB | ||
| EGAF50000101476 | fastq.gz | 3.1 GB | ||
| EGAF50000101477 | fastq.gz | 3.2 GB | ||
| EGAF50000101478 | fastq.gz | 6.0 GB | ||
| EGAF50000101479 | fastq.gz | 6.3 GB | ||
| EGAF50000101480 | fastq.gz | 2.8 GB | ||
| EGAF50000101481 | fastq.gz | 2.9 GB | ||
| EGAF50000101482 | fastq.gz | 3.2 GB | ||
| EGAF50000101483 | fastq.gz | 3.3 GB | ||
| EGAF50000101484 | fastq.gz | 7.0 GB | ||
| EGAF50000101485 | fastq.gz | 7.3 GB | ||
| EGAF50000101486 | fastq.gz | 5.6 GB | ||
| EGAF50000101487 | fastq.gz | 5.8 GB | ||
| EGAF50000101488 | fastq.gz | 4.1 GB | ||
| EGAF50000101489 | fastq.gz | 4.0 GB | ||
| EGAF50000101490 | fastq.gz | 3.2 GB | ||
| EGAF50000101491 | fastq.gz | 3.2 GB | ||
| EGAF50000101492 | fastq.gz | 4.2 GB | ||
| EGAF50000101493 | fastq.gz | 4.3 GB | ||
| EGAF50000101494 | fastq.gz | 4.1 GB | ||
| EGAF50000101495 | fastq.gz | 4.2 GB | ||
| EGAF50000101496 | fastq.gz | 4.1 GB | ||
| EGAF50000101497 | fastq.gz | 4.3 GB | ||
| EGAF50000101498 | fastq.gz | 7.6 GB | ||
| EGAF50000101499 | fastq.gz | 7.9 GB | ||
| EGAF50000101500 | fastq.gz | 3.3 GB | ||
| EGAF50000101501 | fastq.gz | 3.5 GB | ||
| EGAF50000101502 | fastq.gz | 2.7 GB | ||
| EGAF50000101503 | fastq.gz | 2.7 GB | ||
| EGAF50000101504 | fastq.gz | 4.2 GB | ||
| EGAF50000101505 | fastq.gz | 4.3 GB | ||
| EGAF50000101506 | fastq.gz | 3.5 GB | ||
| EGAF50000101507 | fastq.gz | 3.4 GB | ||
| EGAF50000101508 | fastq.gz | 5.3 GB | ||
| EGAF50000101509 | fastq.gz | 5.1 GB | ||
| EGAF50000101510 | fastq.gz | 7.3 GB | ||
| EGAF50000101511 | fastq.gz | 7.0 GB | ||
| EGAF50000101512 | fastq.gz | 3.9 GB | ||
| EGAF50000101513 | fastq.gz | 3.8 GB | ||
| EGAF50000101514 | fastq.gz | 4.3 GB | ||
| EGAF50000101515 | fastq.gz | 4.4 GB | ||
| EGAF50000101516 | fastq.gz | 3.5 GB | ||
| EGAF50000101517 | fastq.gz | 3.6 GB | ||
| EGAF50000101518 | fastq.gz | 3.2 GB | ||
| EGAF50000101519 | fastq.gz | 3.3 GB | ||
| EGAF50000101520 | fastq.gz | 6.5 GB | ||
| EGAF50000101521 | fastq.gz | 6.9 GB | ||
| 96 Files (411.4 GB) | ||||