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Single-cell RNA sequencing of 16 NPM1 mutated AML patients

This dataset contains paired-end fastq files for single-cell RNA-seq of 16 NPM1 mutated AML patients. 19 fastq pairs are included, with two samples split into two lanes and a second (technical) replicate for one patient. Libraries were constructed using 10x Genomics Chromium Next GEM Single cell 3’ v3.1 and sequencing was performed using Illumina NovaSeq6000.

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Policy: Whole transcriptome RNA sequencing as comprehensive diagnostic tool for acute myeloid leukemia.

Restricted access because the study concerns patient data which should not be traced back to the patients. We will require citation plus acknowledgement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000332 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000107457 fastq.gz 5.3 GB
EGAF50000107458 fastq.gz 19.0 GB
EGAF50000107459 fastq.gz 7.9 GB
EGAF50000107460 fastq.gz 29.0 GB
EGAF50000107461 fastq.gz 9.4 GB
EGAF50000107462 fastq.gz 34.0 GB
EGAF50000107463 fastq.gz 8.0 GB
EGAF50000107464 fastq.gz 29.5 GB
EGAF50000107465 fastq.gz 6.5 GB
EGAF50000107466 fastq.gz 22.7 GB
EGAF50000107467 fastq.gz 7.8 GB
EGAF50000107468 fastq.gz 28.3 GB
EGAF50000107469 fastq.gz 8.0 GB
EGAF50000107470 fastq.gz 29.8 GB
EGAF50000107471 fastq.gz 4.2 GB
EGAF50000107472 fastq.gz 15.5 GB
EGAF50000107473 fastq.gz 9.1 GB
EGAF50000107474 fastq.gz 34.1 GB
EGAF50000107475 fastq.gz 2.3 GB
EGAF50000107476 fastq.gz 9.0 GB
EGAF50000107477 fastq.gz 3.3 GB
EGAF50000107478 fastq.gz 11.3 GB
EGAF50000107479 fastq.gz 49.0 GB
EGAF50000107480 fastq.gz 13.1 GB
EGAF50000107481 fastq.gz 4.5 GB
EGAF50000107482 fastq.gz 16.3 GB
EGAF50000107483 fastq.gz 5.9 GB
EGAF50000107484 fastq.gz 21.2 GB
EGAF50000107485 fastq.gz 10.1 GB
EGAF50000107486 fastq.gz 2.7 GB
EGAF50000107487 fastq.gz 3.3 GB
EGAF50000107488 fastq.gz 11.1 GB
EGAF50000107489 fastq.gz 4.5 GB
EGAF50000107490 fastq.gz 15.8 GB
EGAF50000107491 fastq.gz 10.2 GB
EGAF50000107492 fastq.gz 38.2 GB
EGAF50000107493 fastq.gz 39.5 GB
EGAF50000107494 fastq.gz 10.4 GB
38 Files (590.2 GB)