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RNAseq from 6 organotypic co-cultures (OC cells bulk/OCSC with or without TME)

The dataset contains samples of 6 organotypic co-cultures, assembled with patient-derived material from ovarian cancer (OC) patients. Tumor cells, both as bulk and as cancer stem cells-enriched (OCSC) populations, are cultured or not with in vitro peritoneal TME (for details see Battistini C et al, Tumor microenvironment-induced FOXM1 regulates ovarian cancer stemness, CDDis 2024). Dataset is composed by fastq file (paired end) type from bulk RNA-Seq.

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The Istituto Europeo Oncologico's Data Access Policy is an established control put in place to ensure that data protection requirements are followed. It ensures that personally identifiable information in data made available in the IEO is kept from unauthorized users. IEO access control policies are in accordance with art. 13 General Regulation on Data Protection (EU Regulation 2016/679). The IEO requires that users obtain authorization from the Personal Data Protection Manager for accessing controlled data. Decisions to grant access are made based on whether the request conforms to the specifications within the EU and IEO's Data Sharing Policy and program specific requirements or procedures (if any). Investigators who download unrestricted-access data should: - not attempt to identify individual human research participants from whom the data were obtained - acknowledge in all oral or written presentations, disclosures, or publications the specific dataset(s) or applicable accession number(s) and the data repositories through which the investigator accessed any data.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000355 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000110607 fastq.gz 556.3 MB
EGAF50000110608 fastq.gz 535.6 MB
EGAF50000110609 fastq.gz 555.1 MB
EGAF50000110610 fastq.gz 534.3 MB
EGAF50000110611 fastq.gz 626.8 MB
EGAF50000110612 fastq.gz 655.4 MB
EGAF50000110613 fastq.gz 656.8 MB
EGAF50000110614 fastq.gz 628.6 MB
EGAF50000110615 fastq.gz 584.1 MB
EGAF50000110616 fastq.gz 610.9 MB
EGAF50000110617 fastq.gz 591.7 MB
EGAF50000110618 fastq.gz 615.9 MB
EGAF50000110619 fastq.gz 422.6 MB
EGAF50000110620 fastq.gz 447.6 MB
EGAF50000110621 fastq.gz 420.8 MB
EGAF50000110622 fastq.gz 445.9 MB
EGAF50000110623 fastq.gz 695.2 MB
EGAF50000110624 fastq.gz 674.4 MB
EGAF50000110625 fastq.gz 701.9 MB
EGAF50000110626 fastq.gz 668.1 MB
EGAF50000110627 fastq.gz 1.6 GB
EGAF50000110628 fastq.gz 1.5 GB
EGAF50000110629 fastq.gz 654.2 MB
EGAF50000110630 fastq.gz 690.1 MB
EGAF50000110631 fastq.gz 651.1 MB
EGAF50000110632 fastq.gz 687.1 MB
EGAF50000110633 fastq.gz 2.0 GB
EGAF50000110634 fastq.gz 2.0 GB
EGAF50000110635 fastq.gz 1.5 GB
EGAF50000110636 fastq.gz 1.5 GB
EGAF50000110637 fastq.gz 1.6 GB
EGAF50000110638 fastq.gz 1.6 GB
EGAF50000110639 fastq.gz 2.0 GB
EGAF50000110640 fastq.gz 2.1 GB
EGAF50000110641 fastq.gz 810.5 MB
EGAF50000110642 fastq.gz 860.4 MB
EGAF50000110643 fastq.gz 1.1 GB
EGAF50000110644 fastq.gz 1.0 GB
EGAF50000110645 fastq.gz 845.9 MB
EGAF50000110646 fastq.gz 897.2 MB
EGAF50000110647 fastq.gz 553.7 MB
EGAF50000110648 fastq.gz 574.2 MB
EGAF50000110649 fastq.gz 550.2 MB
EGAF50000110650 fastq.gz 573.4 MB
EGAF50000110651 fastq.gz 564.0 MB
EGAF50000110652 fastq.gz 593.4 MB
EGAF50000110653 fastq.gz 565.7 MB
EGAF50000110654 fastq.gz 592.1 MB
EGAF50000110655 fastq.gz 586.2 MB
EGAF50000110656 fastq.gz 611.8 MB
EGAF50000110657 fastq.gz 613.2 MB
EGAF50000110658 fastq.gz 491.8 MB
EGAF50000110659 fastq.gz 492.5 MB
EGAF50000110660 fastq.gz 466.4 MB
EGAF50000110661 fastq.gz 463.2 MB
EGAF50000110662 fastq.gz 615.7 MB
EGAF50000110663 fastq.gz 642.8 MB
EGAF50000110664 fastq.gz 612.6 MB
EGAF50000110665 fastq.gz 639.5 MB
EGAF50000110666 fastq.gz 1.5 GB
EGAF50000110667 fastq.gz 1.5 GB
EGAF50000110668 fastq.gz 1.6 GB
EGAF50000110669 fastq.gz 1.6 GB
EGAF50000110670 fastq.gz 1.7 GB
EGAF50000110671 fastq.gz 1.8 GB
EGAF50000110672 fastq.gz 900.5 MB
EGAF50000110673 fastq.gz 951.5 MB
EGAF50000110674 fastq.gz 575.0 MB
EGAF50000110675 fastq.gz 592.7 MB
EGAF50000110676 fastq.gz 571.9 MB
EGAF50000110677 fastq.gz 592.0 MB
71 Files (62.0 GB)