About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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shallow whole genome sequencing dataset

This dataset comes from shallow whole genome sequencing data of STIC project

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DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

Data access policy relating to the STIC project

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom Iain McNeish grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: Iain McNeish is responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. Imperial College London

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000360 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008402032 fastq.gz 355.7 MB Report
EGAF00008402033 fastq.gz 431.4 MB Report
EGAF00008402034 fastq.gz 843.0 MB Report
EGAF00008402035 fastq.gz 840.5 MB Report
EGAF00008402036 fastq.gz 857.4 MB Report
EGAF00008402043 fastq.gz 1.8 GB Report
EGAF00008402045 fastq.gz 1.4 GB Report
EGAF00008402046 fastq.gz 1.7 GB Report
EGAF00008402047 fastq.gz 2.3 GB Report
EGAF00008402053 fastq.gz 564.6 MB Report
EGAF00008402058 fastq.gz 4.8 GB Report
EGAF00008402059 fastq.gz 526.9 MB Report
EGAF00008402060 fastq.gz 4.8 GB Report
EGAF00008402061 fastq.gz 1.8 GB Report
EGAF00008402062 fastq.gz 2.8 GB Report
EGAF00008402064 fastq.gz 411.9 MB Report
EGAF00008402068 fastq.gz 346.2 MB Report
EGAF00008402074 fastq.gz 369.3 MB Report
EGAF00008402075 fastq.gz 992.6 MB Report
EGAF00008402076 fastq.gz 1.6 GB Report
EGAF00008402077 fastq.gz 1.4 GB Report
EGAF00008402082 fastq.gz 365.5 MB Report
EGAF00008402085 fastq.gz 734.0 MB Report
EGAF00008402086 fastq.gz 567.8 MB Report
EGAF00008402087 fastq.gz 903.8 MB Report
EGAF00008402088 fastq.gz 2.1 GB Report
EGAF00008402092 fastq.gz 1.4 GB Report
EGAF00008402093 fastq.gz 1.3 GB Report
EGAF00008402095 fastq.gz 952.8 MB Report
EGAF00008402099 fastq.gz 511.2 MB Report
EGAF00008402103 fastq.gz 1.8 GB Report
EGAF00008402109 fastq.gz 373.5 MB Report
EGAF00008402110 fastq.gz 1.5 GB Report
EGAF00008402114 fastq.gz 737.4 MB Report
EGAF00008402119 fastq.gz 514.1 MB Report
EGAF00008402139 fastq.gz 1.5 GB Report
EGAF00008402148 fastq.gz 417.0 MB Report
EGAF00008402150 fastq.gz 565.2 MB Report
EGAF00008402151 fastq.gz 581.4 MB Report
EGAF00008402157 fastq.gz 1.8 GB Report
EGAF00008402159 fastq.gz 836.0 MB Report
EGAF00008402166 fastq.gz 2.1 GB Report
EGAF00008402170 fastq.gz 1.9 GB Report
EGAF00008402175 fastq.gz 688.6 MB Report
EGAF00008402178 fastq.gz 1.8 GB Report
EGAF00008402194 fastq.gz 1.8 GB Report
EGAF00008402195 fastq.gz 2.8 GB Report
EGAF00008402196 fastq.gz 31.8 MB Report
EGAF00008402197 fastq.gz 31.0 MB Report
EGAF00008402202 fastq.gz 3.5 GB Report
EGAF00008402210 fastq.gz 376.7 MB Report
EGAF00008402214 fastq.gz 1.0 GB Report
EGAF00008402232 fastq.gz 4.4 GB Report
EGAF00008402242 fastq.gz 3.5 GB Report
EGAF00008402253 fastq.gz 381.2 MB Report
EGAF00008402264 fastq.gz 1.0 GB Report
EGAF00008402273 fastq.gz 997.3 MB Report
EGAF00008402274 fastq.gz 956.9 MB Report
EGAF00008402293 fastq.gz 546.6 MB Report
EGAF00008402294 fastq.gz 374.4 MB Report
EGAF00008402333 fastq.gz 2.2 GB Report
EGAF00008402335 fastq.gz 883.6 MB Report
EGAF00008402379 fastq.gz 4.4 GB Report
EGAF00008402381 fastq.gz 637.6 MB Report
EGAF00008402390 fastq.gz 416.7 MB Report
EGAF00008402415 fastq.gz 628.1 MB Report
EGAF00008402420 fastq.gz 1.2 GB Report
EGAF00008402481 fastq.gz 685.0 MB Report
EGAF00008402485 fastq.gz 503.3 MB Report
EGAF00008402523 fastq.gz 521.2 MB Report
EGAF00008402534 fastq.gz 560.7 MB Report
EGAF00008402575 fastq.gz 1.3 GB Report
EGAF00008402719 fastq.gz 387.3 MB Report
EGAF00008402722 fastq.gz 367.9 MB Report
EGAF00008402723 fastq.gz 1.5 GB Report
EGAF00008402917 fastq.gz 514.4 MB Report
76 Files (95.7 GB)