Whole exome sequencing of Ewing sarcoma and CIC-DUX4 sarcoma
Whole exome sequencing of a collection of 6 Ewing sarcoma and 3 CIC-DUX4 sarcoma tumoroids plus 4 matched patient tumors and normal tissue. Tumoroids were established from digested patient tumor material as 3D culture in Matrigel. After 2-3 month of growth, Genomic DNA was isolated from individual tumoroid models using the DNeasy Blood & Tissue Kit (Qiagen) and used for whole exome sequencing. Genomic DNA from corresponding patient tumors and matched normal tissue was tested in parallel, if available.
- 28/10/2024
- 18 samples
- DAC: EGAC50000000260
- Technology: Illumina NovaSeq 6000
Data University Children`s Hospital Zurich
No data use restrictions.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000379 | Exome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000125279 | fastq.gz | 7.9 GB | ||
| EGAF50000125280 | fastq.gz | 8.1 GB | ||
| EGAF50000125281 | fastq.gz | 7.6 GB | ||
| EGAF50000125282 | fastq.gz | 8.0 GB | ||
| EGAF50000125283 | fastq.gz | 7.5 GB | ||
| EGAF50000125284 | fastq.gz | 7.3 GB | ||
| EGAF50000125291 | fastq.gz | 7.1 GB | ||
| EGAF50000125292 | fastq.gz | 7.4 GB | ||
| EGAF50000125295 | fastq.gz | 6.5 GB | ||
| EGAF50000125296 | fastq.gz | 6.8 GB | ||
| EGAF50000125297 | fastq.gz | 7.2 GB | ||
| EGAF50000125298 | fastq.gz | 7.4 GB | ||
| EGAF50000125299 | fastq.gz | 7.3 GB | ||
| EGAF50000125300 | fastq.gz | 7.4 GB | ||
| EGAF50000125301 | fastq.gz | 8.5 GB | ||
| EGAF50000125302 | fastq.gz | 8.2 GB | ||
| EGAF50000125305 | fastq.gz | 8.3 GB | ||
| EGAF50000125306 | fastq.gz | 8.7 GB | ||
| EGAF50000125307 | fastq.gz | 8.9 GB | ||
| EGAF50000125308 | fastq.gz | 8.5 GB | ||
| EGAF50000125309 | fastq.gz | 7.7 GB | ||
| EGAF50000125310 | fastq.gz | 8.1 GB | ||
| EGAF50000125311 | fastq.gz | 7.6 GB | ||
| EGAF50000125312 | fastq.gz | 7.3 GB | ||
| EGAF50000125319 | fastq.gz | 7.8 GB | ||
| EGAF50000125320 | fastq.gz | 8.3 GB | ||
| EGAF50000125321 | fastq.gz | 7.4 GB | ||
| EGAF50000125322 | fastq.gz | 7.6 GB | ||
| EGAF50000125323 | fastq.gz | 7.1 GB | ||
| EGAF50000125324 | fastq.gz | 7.3 GB | ||
| EGAF50000125325 | fastq.gz | 7.1 GB | ||
| EGAF50000125326 | fastq.gz | 7.4 GB | ||
| EGAF50000125327 | fastq.gz | 9.0 GB | ||
| EGAF50000125328 | fastq.gz | 8.5 GB | ||
| EGAF50000125335 | fastq.gz | 7.1 GB | ||
| EGAF50000125336 | fastq.gz | 6.7 GB | ||
| 36 Files (276.7 GB) | ||||