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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Whole exome sequencing of Ewing sarcoma and CIC-DUX4 sarcoma

Whole exome sequencing of a collection of 6 Ewing sarcoma and 3 CIC-DUX4 sarcoma tumoroids plus 4 matched patient tumors and normal tissue. Tumoroids were established from digested patient tumor material as 3D culture in Matrigel. After 2-3 month of growth, Genomic DNA was isolated from individual tumoroid models using the DNeasy Blood & Tissue Kit (Qiagen) and used for whole exome sequencing. Genomic DNA from corresponding patient tumors and matched normal tissue was tested in parallel, if available.

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DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

Data University Children`s Hospital Zurich

No data use restrictions.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000379 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000125279 fastq.gz 7.9 GB Report
EGAF50000125280 fastq.gz 8.1 GB Report
EGAF50000125281 fastq.gz 7.6 GB Report
EGAF50000125282 fastq.gz 8.0 GB Report
EGAF50000125283 fastq.gz 7.5 GB Report
EGAF50000125284 fastq.gz 7.3 GB Report
EGAF50000125291 fastq.gz 7.1 GB Report
EGAF50000125292 fastq.gz 7.4 GB Report
EGAF50000125295 fastq.gz 6.5 GB Report
EGAF50000125296 fastq.gz 6.8 GB Report
EGAF50000125297 fastq.gz 7.2 GB Report
EGAF50000125298 fastq.gz 7.4 GB Report
EGAF50000125299 fastq.gz 7.3 GB Report
EGAF50000125300 fastq.gz 7.4 GB Report
EGAF50000125301 fastq.gz 8.5 GB Report
EGAF50000125302 fastq.gz 8.2 GB Report
EGAF50000125305 fastq.gz 8.3 GB Report
EGAF50000125306 fastq.gz 8.7 GB Report
EGAF50000125307 fastq.gz 8.9 GB Report
EGAF50000125308 fastq.gz 8.5 GB Report
EGAF50000125309 fastq.gz 7.7 GB Report
EGAF50000125310 fastq.gz 8.1 GB Report
EGAF50000125311 fastq.gz 7.6 GB Report
EGAF50000125312 fastq.gz 7.3 GB Report
EGAF50000125319 fastq.gz 7.8 GB Report
EGAF50000125320 fastq.gz 8.3 GB Report
EGAF50000125321 fastq.gz 7.4 GB Report
EGAF50000125322 fastq.gz 7.6 GB Report
EGAF50000125323 fastq.gz 7.1 GB Report
EGAF50000125324 fastq.gz 7.3 GB Report
EGAF50000125325 fastq.gz 7.1 GB Report
EGAF50000125326 fastq.gz 7.4 GB Report
EGAF50000125327 fastq.gz 9.0 GB Report
EGAF50000125328 fastq.gz 8.5 GB Report
EGAF50000125335 fastq.gz 7.1 GB Report
EGAF50000125336 fastq.gz 6.7 GB Report
36 Files (276.7 GB)