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Whole exome sequencing of Ewing sarcoma and CIC-DUX4 sarcoma

Whole exome sequencing of a collection of 6 Ewing sarcoma and 3 CIC-DUX4 sarcoma tumoroids plus 4 matched patient tumors and normal tissue. Tumoroids were established from digested patient tumor material as 3D culture in Matrigel. After 2-3 month of growth, Genomic DNA was isolated from individual tumoroid models using the DNeasy Blood & Tissue Kit (Qiagen) and used for whole exome sequencing. Genomic DNA from corresponding patient tumors and matched normal tissue was tested in parallel, if available.

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Data University Children`s Hospital Zurich

No data use restrictions.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000379 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000125279 fastq.gz 7.9 GB
EGAF50000125280 fastq.gz 8.1 GB
EGAF50000125281 fastq.gz 7.6 GB
EGAF50000125282 fastq.gz 8.0 GB
EGAF50000125283 fastq.gz 7.5 GB
EGAF50000125284 fastq.gz 7.3 GB
EGAF50000125291 fastq.gz 7.1 GB
EGAF50000125292 fastq.gz 7.4 GB
EGAF50000125295 fastq.gz 6.5 GB
EGAF50000125296 fastq.gz 6.8 GB
EGAF50000125297 fastq.gz 7.2 GB
EGAF50000125298 fastq.gz 7.4 GB
EGAF50000125299 fastq.gz 7.3 GB
EGAF50000125300 fastq.gz 7.4 GB
EGAF50000125301 fastq.gz 8.5 GB
EGAF50000125302 fastq.gz 8.2 GB
EGAF50000125305 fastq.gz 8.3 GB
EGAF50000125306 fastq.gz 8.7 GB
EGAF50000125307 fastq.gz 8.9 GB
EGAF50000125308 fastq.gz 8.5 GB
EGAF50000125309 fastq.gz 7.7 GB
EGAF50000125310 fastq.gz 8.1 GB
EGAF50000125311 fastq.gz 7.6 GB
EGAF50000125312 fastq.gz 7.3 GB
EGAF50000125319 fastq.gz 7.8 GB
EGAF50000125320 fastq.gz 8.3 GB
EGAF50000125321 fastq.gz 7.4 GB
EGAF50000125322 fastq.gz 7.6 GB
EGAF50000125323 fastq.gz 7.1 GB
EGAF50000125324 fastq.gz 7.3 GB
EGAF50000125325 fastq.gz 7.1 GB
EGAF50000125326 fastq.gz 7.4 GB
EGAF50000125327 fastq.gz 9.0 GB
EGAF50000125328 fastq.gz 8.5 GB
EGAF50000125335 fastq.gz 7.1 GB
EGAF50000125336 fastq.gz 6.7 GB
36 Files (276.7 GB)