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RNA sequencing of Ewing sarcoma and CIC-DUX4 sarcoma

RNA sequencing of a collection of 6 Ewing sarcoma and 3 CIC-DUX4 sarcoma tumoroids plus 3 matched patient tumors. Tumoroids were established from digested patient tumor material as 3D culture in Matrigel. After 2-3 month of growth, RNA was isolated from individual tumoroid models using the RNeasy Kit (Qiagen) and used for whole exome sequencing. RNA from corresponding patient tumors was tested in parallel, if available.

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Data University Children`s Hospital Zurich

No data use restrictions.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000380 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000125285 fastq.gz 6.6 GB
EGAF50000125286 fastq.gz 6.4 GB
EGAF50000125287 fastq.gz 4.3 GB
EGAF50000125288 fastq.gz 4.4 GB
EGAF50000125289 fastq.gz 4.1 GB
EGAF50000125290 fastq.gz 4.4 GB
EGAF50000125293 fastq.gz 5.5 GB
EGAF50000125294 fastq.gz 5.3 GB
EGAF50000125303 fastq.gz 6.9 GB
EGAF50000125304 fastq.gz 6.6 GB
EGAF50000125313 fastq.gz 4.3 GB
EGAF50000125314 fastq.gz 4.4 GB
EGAF50000125315 fastq.gz 6.1 GB
EGAF50000125316 fastq.gz 5.9 GB
EGAF50000125317 fastq.gz 4.3 GB
EGAF50000125318 fastq.gz 4.2 GB
EGAF50000125329 fastq.gz 5.4 GB
EGAF50000125330 fastq.gz 5.3 GB
EGAF50000125331 fastq.gz 5.3 GB
EGAF50000125332 fastq.gz 5.5 GB
EGAF50000125333 fastq.gz 4.3 GB
EGAF50000125334 fastq.gz 4.6 GB
22 Files (114.1 GB)