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Fragmentomics profiling and quantification of plasma Epstein-Barr virus DNA enhance prediction of future nasopharyngeal carcinoma.

This dataset included human plasma EBV DNA target-capture sequencing data. The capture probes were designed to cover the entire EBV genome and selected human autosomal regions. After enrichment, the products were sequenced on the NextSeq500 System (Illumina) and aligned to the EBV genome (AJ507799.2) and the human genome (hg19) in BAM format.

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This agreement governs the terms and conditions on which access will be granted to users of the sequencing and genotyping data generated by The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG).

The CUHK Circulating Nucleic Acids Research Group Data Access Agreement This agreement governs the terms and conditions on which access will be granted to users of the sequencing and genotyping data generated by The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG). The terms and conditions of access set out in this agreement apply both to the User and the User’s Institution (both as defined below). User is referred to within the agreement as “You” and the term “Your” will be construed accordingly. By signing this agreement, You agree to be bound by the terms and conditions of access set out in this agreement. Definitions: Group means The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG). Data means all and any human genetic data obtained by User or User’s Institution from the Group via the European Genome-phenome Archive. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. In the event that the Data Subject is legally incapable of giving an informed consent, such consent has been given by his/her legal guardian. User means a researcher whose User’s Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance by the Group. Data Access Committee means a committee assigned by the Group for reviewing and approving the data access application of the User. The committee consists of three or more investigators from the Group. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written, electronic, graphical, photographic, recorded (including oral recordings), and verbal presentations of research. User’s Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: By signing this agreement: 1. You agree to use the Data only for the advancement of medical and scientific research, according to the consent given by Data Subjects. 2. You agree not to use the Data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to transfer or disclose the Data, in whole or in part, or any information/material derived from the Data, to others, except as reasonably necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator within the same User’s Institution, the collaborator must make a separate application for access to the Data. 5. You agree to use the Data for the approved purpose and project described in your application only; use of the Data for a new purpose or project will require a new application and approval. 6. You agree to acknowledge in any work based in whole or in part on the Data, the publications from which the Data derives, the version of the Data, and the role of the Group. The wordings of the acknowledgement are “This study makes use of data generated by The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group, as reported by Chan et al in Clinical Chemistry (doi:10.1373/clinchem.2012.196014). 7. You accept that the Group, the original data creators, depositors or copyright holders, or the funders of the Group: a) make no warranties or representations with respect to the Data, including but not limited to its fitness for purpose, accuracy or comprehensiveness, the continued access to the Data without interruption; and b) accept no liability for any direct, indirect, consequential, special or incidental, damages or losses arising from or in connection with the use of the Data or this agreement. 8. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that reproduction, except as reasonably required to carry out Your research with the Data in accordance with the approved purpose referred to in paragraph 5 above, or sale of all or part of the Data in any form is not permitted. 9. You agree that nothing in this agreement shall operate to transfer to You or to the User’s Institution any intellectual property rights relating to the Data. 10. You accept that this agreement will be terminated immediately by the Group without notice upon breach of any terms of this agreement by You and You agree to destroy any Data held when required. 11. You accept that it may be necessary for the Group or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Group or its appointed agent will to inform You of any changes. You agree that Your continued use of the Data shall be deemed to represent your consent to any revised terms of the Agreement. 12. You agree that you will submit a report to the Data Access Committee, if requested, on completion of the agreed purpose. The Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User’s Institution. 13. You accept that the Data is protected by the privacy law in the relevant jurisdiction and that You are responsible for ensuring Your use of the Data is in compliance with any such applicable law. Notwithstanding the above, nothing in this agreement shall limit the rights of the Data Subjects under the Personal Data (Privacy) Ordinance (Cap 486) in Hong Kong. The Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the Personal Data (Privacy) Ordinance in Hong Kong. 14. This agreement shall be construed, interpreted and governed by the laws of Hong Kong Special Administrative Region.   For and on behalf of User: Name of Applicant(s): _____________________________________ _____________________________________ _____________________________________ _____________________________________ Signature of Applicant(s): _____________________________________ _____________________________________ _____________________________________ _____________________________________ Date: _____________________________________ For and on behalf of User’s Institution: Signature of Institutional or Administrative Authority: ______________________________________ Print name: ______________________________________ User’s Institution: ______________________________________ Date: ¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬______________________________________ WHEN SUBMITTING THIS DOCUMENT, PLEASE INCLUDE ALL PAGES OF THE AGREEMENT WITH THIS SIGNATURE PAGE

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000395 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000129737 bam 128.8 MB
EGAF50000129738 bam 97.1 MB
EGAF50000129739 bam 117.9 MB
EGAF50000129740 bam 133.0 MB
EGAF50000129741 bam 111.0 MB
EGAF50000129742 bam 103.7 MB
EGAF50000129743 bam 1.2 GB
EGAF50000129744 bam 86.9 MB
EGAF50000129745 bam 120.0 MB
EGAF50000129746 bam 91.0 MB
EGAF50000129747 bam 302.0 MB
EGAF50000129748 bam 288.2 MB
EGAF50000129749 bam 303.1 MB
EGAF50000129750 bam 293.1 MB
EGAF50000129751 bam 276.6 MB
EGAF50000129752 bam 315.2 MB
EGAF50000129753 bam 276.0 MB
EGAF50000129754 bam 312.4 MB
EGAF50000129755 bam 145.7 MB
EGAF50000129756 bam 134.1 MB
EGAF50000129757 bam 145.2 MB
EGAF50000129758 bam 93.9 MB
EGAF50000129759 bam 93.1 MB
EGAF50000129760 bam 113.2 MB
EGAF50000129761 bam 149.8 MB
EGAF50000129762 bam 112.1 MB
EGAF50000129763 bam 86.1 MB
EGAF50000129764 bam 129.6 MB
EGAF50000129765 bam 126.9 MB
EGAF50000129766 bam 205.3 MB
EGAF50000129767 bam 111.2 MB
EGAF50000129768 bam 168.4 MB
EGAF50000129769 bam 138.8 MB
EGAF50000129770 bam 201.5 MB
EGAF50000129771 bam 170.8 MB
EGAF50000129772 bam 150.8 MB
EGAF50000129773 bam 208.1 MB
EGAF50000129774 bam 209.7 MB
EGAF50000129775 bam 170.7 MB
EGAF50000129776 bam 164.2 MB
EGAF50000129777 bam 148.5 MB
EGAF50000129778 bam 183.0 MB
EGAF50000129779 bam 143.4 MB
EGAF50000129780 bam 155.4 MB
EGAF50000129781 bam 126.6 MB
EGAF50000129782 bam 124.1 MB
EGAF50000129783 bam 160.6 MB
EGAF50000129784 bam 117.6 MB
EGAF50000129785 bam 167.2 MB
EGAF50000129786 bam 154.8 MB
EGAF50000129787 bam 134.7 MB
EGAF50000129788 bam 150.8 MB
EGAF50000129789 bam 141.3 MB
EGAF50000129790 bam 147.1 MB
EGAF50000129791 bam 906.3 MB
EGAF50000129792 bam 136.4 MB
EGAF50000129793 bam 132.1 MB
EGAF50000129794 bam 195.8 MB
EGAF50000129795 bam 838.3 MB
EGAF50000129796 bam 172.5 MB
EGAF50000129797 bam 106.8 MB
EGAF50000129798 bam 228.2 MB
EGAF50000129799 bam 1.1 GB
EGAF50000129800 bam 196.5 MB
EGAF50000129801 bam 216.4 MB
EGAF50000129802 bam 205.3 MB
EGAF50000129803 bam 212.0 MB
EGAF50000129804 bam 199.6 MB
EGAF50000129805 bam 108.0 MB
EGAF50000129806 bam 170.2 MB
EGAF50000129807 bam 140.0 MB
EGAF50000129808 bam 115.5 MB
EGAF50000129809 bam 158.9 MB
EGAF50000129810 bam 106.8 MB
EGAF50000129811 bam 155.6 MB
EGAF50000129812 bam 135.5 MB
EGAF50000129813 bam 167.2 MB
EGAF50000129814 bam 1.9 GB
EGAF50000129815 bam 153.7 MB
EGAF50000129816 bam 208.7 MB
EGAF50000129817 bam 216.9 MB
EGAF50000129818 bam 235.4 MB
EGAF50000129819 bam 230.5 MB
EGAF50000129820 bam 220.9 MB
EGAF50000129821 bam 230.0 MB
EGAF50000129822 bam 291.6 MB
EGAF50000129823 bam 230.5 MB
EGAF50000129824 bam 123.6 MB
EGAF50000129825 bam 212.9 MB
EGAF50000129826 bam 287.8 MB
EGAF50000129827 bam 302.2 MB
EGAF50000129828 bam 279.6 MB
EGAF50000129829 bam 286.7 MB
EGAF50000129830 bam 292.0 MB
EGAF50000129831 bam 290.9 MB
EGAF50000129832 bam 184.8 MB
EGAF50000129833 bam 417.8 MB
EGAF50000129834 bam 166.5 MB
EGAF50000129835 bam 179.4 MB
EGAF50000129836 bam 127.5 MB
EGAF50000129837 bam 123.3 MB
EGAF50000129838 bam 92.4 MB
EGAF50000129839 bam 201.5 MB
EGAF50000129840 bam 75.1 MB
EGAF50000129841 bam 143.3 MB
EGAF50000129842 bam 171.3 MB
EGAF50000129843 bam 190.2 MB
EGAF50000129844 bam 128.2 MB
EGAF50000129845 bam 129.7 MB
EGAF50000129846 bam 186.8 MB
EGAF50000129847 bam 195.0 MB
EGAF50000129848 bam 175.3 MB
EGAF50000129849 bam 190.7 MB
EGAF50000129850 bam 166.4 MB
EGAF50000129851 bam 128.4 MB
EGAF50000129852 bam 118.2 MB
EGAF50000129853 bam 127.7 MB
EGAF50000129854 bam 108.1 MB
EGAF50000129855 bam 109.9 MB
EGAF50000129856 bam 120.8 MB
EGAF50000129857 bam 102.3 MB
EGAF50000129858 bam 119.9 MB
EGAF50000129859 bam 129.0 MB
EGAF50000129860 bam 127.8 MB
EGAF50000129861 bam 137.0 MB
EGAF50000129862 bam 131.8 MB
EGAF50000129863 bam 145.5 MB
EGAF50000129864 bam 404.4 MB
EGAF50000129865 bam 251.1 MB
EGAF50000129866 bam 154.5 MB
EGAF50000129867 bam 209.6 MB
EGAF50000129868 bam 257.7 MB
EGAF50000129869 bam 105.8 MB
EGAF50000129870 bam 232.0 MB
EGAF50000129871 bam 236.0 MB
EGAF50000129872 bam 229.8 MB
EGAF50000129873 bam 159.7 MB
EGAF50000129874 bam 254.9 MB
EGAF50000129875 bam 314.5 MB
EGAF50000129876 bam 837.6 MB
EGAF50000129877 bam 185.6 MB
EGAF50000129878 bam 166.9 MB
EGAF50000129879 bam 183.7 MB
EGAF50000129880 bam 263.9 MB
EGAF50000129881 bam 177.7 MB
EGAF50000129882 bam 161.1 MB
EGAF50000129883 bam 167.4 MB
EGAF50000129884 bam 186.0 MB
EGAF50000129885 bam 256.0 MB
EGAF50000129886 bam 269.8 MB
EGAF50000129887 bam 227.4 MB
EGAF50000129888 bam 204.7 MB
EGAF50000129889 bam 264.1 MB
EGAF50000129890 bam 708.2 MB
EGAF50000129891 bam 277.0 MB
EGAF50000129892 bam 267.4 MB
EGAF50000129893 bam 160.9 MB
EGAF50000129894 bam 182.4 MB
EGAF50000129895 bam 149.9 MB
EGAF50000129896 bam 281.9 MB
EGAF50000129897 bam 219.8 MB
EGAF50000129898 bam 325.1 MB
EGAF50000129899 bam 295.1 MB
EGAF50000129900 bam 297.5 MB
EGAF50000129901 bam 297.1 MB
EGAF50000129902 bam 299.0 MB
EGAF50000129903 bam 291.2 MB
EGAF50000129904 bam 273.6 MB
EGAF50000129905 bam 689.7 MB
EGAF50000129906 bam 865.6 MB
EGAF50000129907 bam 857.9 MB
EGAF50000129908 bam 689.6 MB
EGAF50000129909 bam 1.0 GB
EGAF50000129910 bam 515.9 MB
EGAF50000129911 bam 735.6 MB
EGAF50000129912 bam 534.2 MB
EGAF50000129913 bam 502.0 MB
EGAF50000129914 bam 460.6 MB
EGAF50000129915 bam 429.9 MB
EGAF50000129916 bam 392.6 MB
EGAF50000129917 bam 449.6 MB
EGAF50000129918 bam 427.9 MB
EGAF50000129919 bam 498.0 MB
EGAF50000129920 bam 382.7 MB
EGAF50000129921 bam 323.0 MB
EGAF50000129922 bam 343.8 MB
EGAF50000129923 bam 392.8 MB
EGAF50000129924 bam 435.6 MB
EGAF50000129925 bam 357.3 MB
EGAF50000129926 bam 440.9 MB
EGAF50000129927 bam 295.2 MB
EGAF50000129928 bam 302.2 MB
EGAF50000129929 bam 262.7 MB
EGAF50000129930 bam 300.8 MB
EGAF50000129931 bam 346.0 MB
EGAF50000129932 bam 279.0 MB
EGAF50000129933 bam 284.3 MB
EGAF50000129934 bam 273.4 MB
EGAF50000129935 bam 243.8 MB
EGAF50000129936 bam 253.5 MB
EGAF50000129937 bam 286.0 MB
EGAF50000129938 bam 334.6 MB
EGAF50000129939 bam 292.4 MB
EGAF50000129940 bam 329.4 MB
EGAF50000129941 bam 232.9 MB
EGAF50000129942 bam 283.6 MB
EGAF50000129943 bam 197.3 MB
EGAF50000129944 bam 337.2 MB
EGAF50000129945 bam 334.7 MB
EGAF50000129946 bam 355.7 MB
EGAF50000129947 bam 313.0 MB
EGAF50000129948 bam 314.4 MB
EGAF50000129949 bam 248.7 MB
EGAF50000129950 bam 319.0 MB
EGAF50000129951 bam 329.4 MB
EGAF50000129952 bam 332.7 MB
EGAF50000129953 bam 304.3 MB
EGAF50000129954 bam 294.5 MB
EGAF50000129955 bam 305.9 MB
EGAF50000129956 bam 252.6 MB
EGAF50000129957 bam 239.9 MB
EGAF50000129958 bam 345.4 MB
EGAF50000129959 bam 329.5 MB
EGAF50000129960 bam 281.9 MB
EGAF50000129961 bam 377.6 MB
EGAF50000129962 bam 294.1 MB
EGAF50000129963 bam 382.4 MB
EGAF50000129964 bam 437.6 MB
EGAF50000129965 bam 354.9 MB
EGAF50000129966 bam 254.1 MB
EGAF50000129967 bam 232.8 MB
EGAF50000129968 bam 239.2 MB
EGAF50000129969 bam 276.3 MB
EGAF50000129970 bam 250.7 MB
EGAF50000129971 bam 298.9 MB
EGAF50000129972 bam 265.9 MB
EGAF50000129973 bam 296.3 MB
EGAF50000129974 bam 223.5 MB
EGAF50000129975 bam 262.0 MB
EGAF50000129976 bam 298.0 MB
EGAF50000129977 bam 256.0 MB
EGAF50000129978 bam 294.1 MB
EGAF50000129979 bam 286.1 MB
EGAF50000129980 bam 263.8 MB
EGAF50000129981 bam 258.9 MB
EGAF50000129982 bam 290.2 MB
EGAF50000129983 bam 289.1 MB
EGAF50000129984 bam 266.4 MB
EGAF50000129985 bam 213.9 MB
EGAF50000129986 bam 223.6 MB
EGAF50000129987 bam 241.2 MB
EGAF50000129988 bam 192.8 MB
EGAF50000129989 bam 257.7 MB
EGAF50000129990 bam 222.3 MB
EGAF50000129991 bam 244.8 MB
EGAF50000129992 bam 284.1 MB
EGAF50000129993 bam 270.9 MB
EGAF50000129994 bam 260.9 MB
EGAF50000129995 bam 267.7 MB
EGAF50000129996 bam 361.8 MB
EGAF50000129997 bam 314.1 MB
EGAF50000129998 bam 354.9 MB
EGAF50000129999 bam 288.9 MB
EGAF50000130000 bam 351.2 MB
EGAF50000130001 bam 355.2 MB
EGAF50000130002 bam 413.2 MB
EGAF50000130003 bam 334.4 MB
EGAF50000130004 bam 257.7 MB
EGAF50000130005 bam 316.9 MB
EGAF50000130006 bam 306.7 MB
EGAF50000130007 bam 336.4 MB
EGAF50000130008 bam 253.2 MB
EGAF50000130009 bam 345.1 MB
EGAF50000130010 bam 351.6 MB
EGAF50000130011 bam 332.0 MB
EGAF50000130012 bam 272.0 MB
EGAF50000130013 bam 280.3 MB
EGAF50000130014 bam 234.6 MB
EGAF50000130015 bam 291.7 MB
EGAF50000130016 bam 278.2 MB
EGAF50000130017 bam 208.4 MB
EGAF50000130018 bam 210.7 MB
EGAF50000130019 bam 211.5 MB
EGAF50000130020 bam 278.2 MB
EGAF50000130021 bam 249.2 MB
EGAF50000130022 bam 241.6 MB
EGAF50000130023 bam 311.8 MB
EGAF50000130024 bam 226.4 MB
EGAF50000130025 bam 225.2 MB
EGAF50000130026 bam 255.9 MB
EGAF50000130027 bam 251.4 MB
EGAF50000130028 bam 245.8 MB
EGAF50000130029 bam 166.8 MB
EGAF50000130030 bam 156.9 MB
EGAF50000130031 bam 297.7 MB
EGAF50000130032 bam 161.6 MB
EGAF50000130033 bam 177.5 MB
EGAF50000130034 bam 211.1 MB
EGAF50000130035 bam 201.3 MB
EGAF50000130036 bam 176.0 MB
EGAF50000130037 bam 275.8 MB
EGAF50000130038 bam 233.4 MB
EGAF50000130039 bam 278.5 MB
EGAF50000130040 bam 343.1 MB
EGAF50000130041 bam 269.4 MB
EGAF50000130042 bam 264.2 MB
EGAF50000130043 bam 300.0 MB
EGAF50000130044 bam 311.5 MB
EGAF50000130045 bam 290.7 MB
EGAF50000130046 bam 238.3 MB
EGAF50000130047 bam 159.2 MB
EGAF50000130048 bam 249.7 MB
EGAF50000130049 bam 238.4 MB
EGAF50000130050 bam 238.6 MB
EGAF50000130051 bam 238.0 MB
EGAF50000130052 bam 252.7 MB
EGAF50000130053 bam 200.1 MB
EGAF50000130054 bam 225.5 MB
EGAF50000130055 bam 277.9 MB
EGAF50000130056 bam 354.7 MB
EGAF50000130057 bam 378.3 MB
EGAF50000130058 bam 346.2 MB
EGAF50000130059 bam 322.0 MB
EGAF50000130060 bam 306.3 MB
EGAF50000130061 bam 265.6 MB
EGAF50000130062 bam 305.3 MB
EGAF50000130063 bam 213.0 MB
EGAF50000130064 bam 238.0 MB
EGAF50000130065 bam 344.9 MB
EGAF50000130066 bam 246.7 MB
EGAF50000130067 bam 336.6 MB
EGAF50000130068 bam 340.9 MB
EGAF50000130069 bam 372.0 MB
EGAF50000130070 bam 382.8 MB
EGAF50000130071 bam 351.5 MB
EGAF50000130072 bam 338.9 MB
EGAF50000130073 bam 252.8 MB
EGAF50000130074 bam 290.9 MB
EGAF50000130075 bam 330.7 MB
EGAF50000130076 bam 224.9 MB
EGAF50000130077 bam 341.0 MB
EGAF50000130078 bam 330.5 MB
EGAF50000130079 bam 367.7 MB
EGAF50000130080 bam 329.4 MB
EGAF50000130081 bam 261.9 MB
EGAF50000130082 bam 203.8 MB
EGAF50000130083 bam 226.4 MB
EGAF50000130084 bam 219.1 MB
EGAF50000130085 bam 249.6 MB
EGAF50000130086 bam 275.0 MB
EGAF50000130087 bam 134.1 MB
EGAF50000130088 bam 238.4 MB
EGAF50000130089 bam 239.0 MB
EGAF50000130090 bam 333.5 MB
EGAF50000130091 bam 596.1 MB
EGAF50000130092 bam 421.4 MB
EGAF50000130093 bam 448.8 MB
EGAF50000130094 bam 541.3 MB
EGAF50000130095 bam 435.6 MB
EGAF50000130096 bam 449.3 MB
360 Files (98.1 GB)