CRC cell line MPRA

Massively Parallel Reporter Assays (MPRA) of colorectal cell lines HCEC-1CT (normal colon) and HT29 and SW403 (MSS cancer). Probes identified using the CRC GWAS.

22/07/2024
3 samples
DAC: EGAC50000000023
Technology: Illumina NovaSeq 6000

Access Policy1 Study Files

Metadata

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NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
GS DUO:0000022 (version: 2021-02-23)geographical restrictionThis data use modifier indicates that use is limited to within a specific geographic region.
US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
IS DUO:0000028 (version: 2021-02-23)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.

ICR Cancer Genomics Cell Line Data Policy

Please contact Janet Nwaoshai (janet.nwaoshai@icr.ac.uk) and Richard Houlston (richard.houlston@icr.ac.uk) for the full policy details and data access agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS50000000406	Colorectal cancer functional annotation - MPRA	Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF50000134233	fastq.gz	1.5 GB
EGAF50000134234	fastq.gz	1.6 GB
EGAF50000134235	fastq.gz	1.7 GB
EGAF50000134236	fastq.gz	1.6 GB
EGAF50000134237	fastq.gz	1.7 GB
EGAF50000134238	fastq.gz	1.7 GB
EGAF50000134239	fastq.gz	1.2 GB
EGAF50000134240	fastq.gz	1.2 GB
EGAF50000134241	fastq.gz	1.3 GB
EGAF50000134242	fastq.gz	3.0 GB
EGAF50000134243	fastq.gz	3.1 GB
EGAF50000134244	fastq.gz	3.1 GB
EGAF50000134245	fastq.gz	3.3 GB
EGAF50000134246	fastq.gz	3.4 GB
EGAF50000134247	fastq.gz	3.3 GB
EGAF50000134248	fastq.gz	3.1 GB
EGAF50000134249	fastq.gz	3.1 GB
EGAF50000134250	fastq.gz	3.2 GB
EGAF50000134251	txt	558.4 kB
EGAF50000134252	fastq.gz	4.5 GB
EGAF50000134253	fastq.gz	4.7 GB
EGAF50000134254	fastq.gz	5.0 GB
EGAF50000134255	fastq.gz	4.3 GB
EGAF50000134256	fastq.gz	4.3 GB
EGAF50000134257	fastq.gz	4.7 GB
EGAF50000134258	fastq.gz	3.0 GB
EGAF50000134259	fastq.gz	3.0 GB
EGAF50000134260	fastq.gz	3.3 GB
EGAF50000134261	fastq.gz	1.2 GB
EGAF50000134262	fastq.gz	1.2 GB
EGAF50000134263	fastq.gz	1.3 GB
EGAF50000134264	fastq.gz	1.2 GB
EGAF50000134265	fastq.gz	1.2 GB
EGAF50000134266	fastq.gz	1.3 GB
EGAF50000134267	fastq.gz	1.7 GB
EGAF50000134268	fastq.gz	1.7 GB
EGAF50000134269	fastq.gz	1.9 GB
EGAF50000134270	txt	557.7 kB
EGAF50000134271	fastq.gz	1.2 GB
EGAF50000134272	fastq.gz	1.3 GB
EGAF50000134273	fastq.gz	1.3 GB
EGAF50000134274	fastq.gz	590.7 MB
EGAF50000134275	fastq.gz	600.4 MB
EGAF50000134276	fastq.gz	651.2 MB
EGAF50000134277	fastq.gz	1.2 GB
EGAF50000134278	fastq.gz	1.3 GB
EGAF50000134279	fastq.gz	1.3 GB
EGAF50000134280	fastq.gz	4.2 GB
EGAF50000134281	fastq.gz	4.3 GB
EGAF50000134282	fastq.gz	4.4 GB
EGAF50000134283	fastq.gz	2.2 GB
EGAF50000134284	fastq.gz	2.3 GB
EGAF50000134285	fastq.gz	2.3 GB
EGAF50000134286	fastq.gz	4.0 GB
EGAF50000134287	fastq.gz	4.4 GB
EGAF50000134288	txt	557.1 kB
56 Files (128.9 GB)