Need Help?

ProstOmics - DNA methylation v1

Bulk methylation array data from 64 prostate tissue samples from 16 patients (5 with post-surgery relapse). Methylation data were acquired using the microarray kit Illumina Infinium MethylationEPIC BeadChip (n=64 ). The individual samples have information on patient origin and sample type (cancer, cancer-adjacent field-effect normal or normal sample far from cancer). Patient metadata include information of age at surgery, time (months) until reported relapse, pre-surgery PSA and post-surgery T-stage.

Request Access

NTNU Data Access Policy for “ProstOmics: spatial and bulk multi-omics of prostate cancer” datasets archived in Federated EGA Norway

1. Data Access Committee A Data Access Committee (DAC) is a body of one or more named individuals who are responsible for data release to external requesters based on consent and/or National Research Ethics terms. Each dataset submitted by the Norwegian University of Science and Technology (NTNU) for archival and controlled access sharing in Federated EGA Norway, has a DAC appointed by NTNU to govern controlled access to the dataset according to this Data Access Policy. Multiple datasets may be affiliated to a single DAC. NTNU as an institution has the overall data controller responsibility, and has appointed a DAC based on proper internal procedures that ensures involvement of institutional functions such as Data Protection Officer, legal control, etc. 2. Data use conditions To advise any would-be requester on how the data can be used, Data Use Ontology codes (DUO) is associated to each dataset, providing the requester more insights into which terms for sharing and use of the data that applies, and that needs to be addressed as part of the communication with the DAC in a data access request. No access to a NTNU dataset deposited in FEGA Norway can be granted to a requester before all applicable conditions and requirements for the use and management of the data have been agreed upon in a signed Data Access Agreement. All research projects that include information from ProstOmics must comply with the EU’s General Data Protection Regulation (GDPR). This means that the processing must have approval from the Regional Committee for Medical Research in Norway (REC). Furthermore, the processing needs legal basis according to GDPR Article 6 and 9. The applicant must have considered the need for a Data Protection Impact Assessment (DPIA) according to GDPR article 35. The applicant must prove that these requirements have been met before the data can be made available. Disclosure of information to countries outside the EU requires that the conditions in GDPR are met. 3. Data Access Agreement The Data Access Agreement (DAA) will include requirements specific for both the dataset and the management of the data in the hands of the requester applying for access, and will thus be an individual DAA for each case of granted access to a dataset. As a rule, a DAA for a NTNU dataset will take the form of a Data Transfer Agreement. 4. Processing of requests for access The overall data access approval process at NTNU can be summarized as follows: · DAC for an NTNU dataset is contacted by a potential data requester · DAC continues communication with requester to understand the purpose of use, i.e. research setting the dataset is envisioned for by requester, to identify if data sharing is possible directly under current conditions for the dataset, or actions such as updating ethical approvals or new patient consent is needed to accommodate the proposed research setting/data use. · A Data Access Agreement is jointly formulated and agreed upon, with the DAC following internal NTNU procedure to include the Data Protection Officer and Division for research support. · When a completed DAA has been signed between the parties, and archived at NTNU, the DAC will provide the requester with access by either instructing the FEGA Norway node to release the data to the requester or by facilitating access to analyzing the data in HUNT Cloud).

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000413 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000134469 idat 13.7 MB
EGAF50000134470 idat 13.7 MB
EGAF50000134471 idat 13.7 MB
EGAF50000134472 idat 13.7 MB
EGAF50000134473 idat 13.7 MB
EGAF50000134474 idat 13.7 MB
EGAF50000134475 idat 13.7 MB
EGAF50000134476 idat 13.7 MB
EGAF50000134477 idat 13.7 MB
EGAF50000134478 idat 13.7 MB
EGAF50000134479 idat 13.7 MB
EGAF50000134480 idat 13.7 MB
EGAF50000134481 idat 13.7 MB
EGAF50000134482 idat 13.7 MB
EGAF50000134483 idat 13.7 MB
EGAF50000134484 idat 13.7 MB
EGAF50000134485 idat 13.7 MB
EGAF50000134486 idat 13.7 MB
EGAF50000134487 idat 13.7 MB
EGAF50000134488 idat 13.7 MB
EGAF50000134489 idat 13.7 MB
EGAF50000134490 idat 13.7 MB
EGAF50000134491 idat 13.7 MB
EGAF50000134492 idat 13.7 MB
EGAF50000134493 idat 13.7 MB
EGAF50000134494 idat 13.7 MB
EGAF50000134495 idat 13.7 MB
EGAF50000134496 idat 13.7 MB
EGAF50000134497 idat 13.7 MB
EGAF50000134498 idat 13.7 MB
EGAF50000134499 idat 13.7 MB
EGAF50000134500 idat 13.7 MB
EGAF50000134501 idat 13.7 MB
EGAF50000134502 idat 13.7 MB
EGAF50000134503 idat 13.7 MB
EGAF50000134504 idat 13.7 MB
EGAF50000134505 idat 13.7 MB
EGAF50000134506 idat 13.7 MB
EGAF50000134507 idat 13.7 MB
EGAF50000134508 idat 13.7 MB
EGAF50000134509 idat 13.7 MB
EGAF50000134510 idat 13.7 MB
EGAF50000134511 idat 13.7 MB
EGAF50000134512 idat 13.7 MB
EGAF50000134513 idat 13.7 MB
EGAF50000134514 idat 13.7 MB
EGAF50000134515 idat 13.7 MB
EGAF50000134516 idat 13.7 MB
EGAF50000134517 idat 13.7 MB
EGAF50000134518 idat 13.7 MB
EGAF50000134519 idat 13.7 MB
EGAF50000134520 idat 13.7 MB
EGAF50000134521 idat 13.7 MB
EGAF50000134522 idat 13.7 MB
EGAF50000134523 idat 13.7 MB
EGAF50000134524 idat 13.7 MB
EGAF50000134525 idat 13.7 MB
EGAF50000134526 idat 13.7 MB
EGAF50000134527 idat 13.7 MB
EGAF50000134528 idat 13.7 MB
EGAF50000134529 idat 13.7 MB
EGAF50000134530 idat 13.7 MB
EGAF50000134531 idat 13.7 MB
EGAF50000134532 idat 13.7 MB
EGAF50000134533 idat 13.7 MB
EGAF50000134534 idat 13.7 MB
EGAF50000134535 idat 13.7 MB
EGAF50000134536 idat 13.7 MB
EGAF50000134537 idat 13.7 MB
EGAF50000134538 idat 13.7 MB
EGAF50000134539 idat 13.7 MB
EGAF50000134540 idat 13.7 MB
EGAF50000134541 idat 13.7 MB
EGAF50000134542 idat 13.7 MB
EGAF50000134543 idat 13.7 MB
EGAF50000134544 idat 13.7 MB
EGAF50000134545 idat 13.7 MB
EGAF50000134546 idat 13.7 MB
EGAF50000134547 idat 13.7 MB
EGAF50000134548 idat 13.7 MB
EGAF50000134549 idat 13.7 MB
EGAF50000134550 idat 13.7 MB
EGAF50000134551 idat 13.7 MB
EGAF50000134552 idat 13.7 MB
EGAF50000134553 idat 13.7 MB
EGAF50000134554 idat 13.7 MB
EGAF50000134555 idat 13.7 MB
EGAF50000134556 idat 13.7 MB
EGAF50000134557 idat 13.7 MB
EGAF50000134558 idat 13.7 MB
EGAF50000134559 idat 13.7 MB
EGAF50000134560 idat 13.7 MB
EGAF50000134561 idat 13.7 MB
EGAF50000134562 idat 13.7 MB
EGAF50000134563 idat 13.7 MB
EGAF50000134564 idat 13.7 MB
EGAF50000134565 idat 13.7 MB
EGAF50000134566 idat 13.7 MB
EGAF50000134567 idat 13.7 MB
EGAF50000134568 idat 13.7 MB
EGAF50000134569 idat 13.7 MB
EGAF50000134570 idat 13.7 MB
EGAF50000134571 idat 13.7 MB
EGAF50000134572 idat 13.7 MB
EGAF50000134573 idat 13.7 MB
EGAF50000134574 idat 13.7 MB
EGAF50000134575 idat 13.7 MB
EGAF50000134576 idat 13.7 MB
EGAF50000134577 idat 13.7 MB
EGAF50000134578 idat 13.7 MB
EGAF50000134579 idat 13.7 MB
EGAF50000134580 idat 13.7 MB
EGAF50000134581 idat 13.7 MB
EGAF50000134582 idat 13.7 MB
EGAF50000134583 idat 13.7 MB
EGAF50000134584 idat 13.7 MB
EGAF50000134585 idat 13.7 MB
EGAF50000134586 idat 13.7 MB
EGAF50000134587 idat 13.7 MB
EGAF50000134588 idat 13.7 MB
EGAF50000134589 idat 13.7 MB
EGAF50000134590 idat 13.7 MB
EGAF50000134591 idat 13.7 MB
EGAF50000134592 idat 13.7 MB
EGAF50000134593 idat 13.7 MB
EGAF50000134594 idat 13.7 MB
EGAF50000134595 idat 13.7 MB
EGAF50000134596 idat 13.7 MB
EGAF50000134664 tsv 6.4 kB
EGAF50000134665 tsv 962.1 MB
130 Files (2.7 GB)