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L1-Architect Project Dataset

Tumours with high and ultrahigh rates of somatic retrotransposition studied in the publication by Zumalave et al. titled Synchronous L1 retrotransposition events promote chromosomal crossover early in human tumorigenesis

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Data Access Agreement Policies

Application to use these Data must be submitted by email to Jose Tubio, Professor and Group leader at University of Santiago de Compostela (email: jose.mc.tubio@usc.es), including a short description (750 words) of the project aims together with a name of the User Institution, name of the main scientific and administrative contacts in the User Institution, a list of names of the Authorised Personnel from the User Institution only; all signed by the scientific and administrative contacts from the User Institution. Applications should be approved or rejected within two weeks since submission. Is successful: 1. The User Institution agrees to only use these Data for Research Purposes. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel and not to an External Collaborator. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agress recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agress respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data (publication by Zumalave et al. titled Synchronous L1 retrotransposition events promote chromosomal crossover early in human tumorigenesis). 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 11. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000414 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000135090 bam 13.9 GB
EGAF50000135091 bam 12.8 GB
EGAF50000135092 fastq.gz 98.5 GB
EGAF50000135093 fastq.gz 88.7 GB
EGAF50000135094 fastq.gz 103.2 GB
EGAF50000135095 fastq.gz 129.6 GB
EGAF50000135096 fastq.gz 85.0 GB
EGAF50000135097 fastq.gz 92.9 GB
EGAF50000135098 fastq.gz 103.7 GB
EGAF50000135099 fastq.gz 103.8 GB
EGAF50000135100 fastq.gz 111.9 GB
EGAF50000135101 fastq.gz 129.3 GB
EGAF50000135102 fastq.gz 106.0 GB
EGAF50000135103 fastq.gz 85.1 GB
EGAF50000135104 fastq.gz 117.0 GB
EGAF50000135105 fastq.gz 9.5 GB
EGAF50000135106 fastq.gz 9.2 GB
EGAF50000135107 fastq.gz 12.3 GB
EGAF50000135108 fastq.gz 12.8 GB
EGAF50000135109 fastq.gz 10.0 GB
EGAF50000135110 fastq.gz 9.4 GB
EGAF50000135111 fastq.gz 9.3 GB
EGAF50000135112 fastq.gz 9.0 GB
EGAF50000135113 fastq.gz 9.6 GB
EGAF50000135114 fastq.gz 9.8 GB
EGAF50000135115 fastq.gz 9.2 GB
EGAF50000135116 fastq.gz 9.6 GB
EGAF50000135117 fastq.gz 8.7 GB
EGAF50000135118 fastq.gz 8.9 GB
EGAF50000135119 fastq.gz 8.5 GB
EGAF50000135120 fastq.gz 8.8 GB
EGAF50000135121 fastq.gz 11.0 GB
EGAF50000135122 fastq.gz 10.7 GB
EGAF50000135123 fastq.gz 9.2 GB
EGAF50000135124 fastq.gz 8.8 GB
EGAF50000135125 fastq.gz 9.7 GB
EGAF50000135126 fastq.gz 9.3 GB
EGAF50000135127 fastq.gz 9.0 GB
EGAF50000135128 fastq.gz 9.3 GB
EGAF50000135129 fastq.gz 8.7 GB
EGAF50000135130 fastq.gz 9.0 GB
EGAF50000135131 fastq.gz 10.0 GB
EGAF50000135132 fastq.gz 9.7 GB
EGAF50000135133 fastq.gz 9.1 GB
EGAF50000135134 fastq.gz 9.4 GB
EGAF50000135135 fastq.gz 9.0 GB
EGAF50000135136 fastq.gz 8.7 GB
EGAF50000135137 fastq.gz 14.9 GB
EGAF50000135138 fastq.gz 15.3 GB
EGAF50000135139 fastq.gz 9.2 GB
EGAF50000135140 fastq.gz 9.5 GB
EGAF50000135141 fastq.gz 9.3 GB
EGAF50000135142 fastq.gz 9.5 GB
EGAF50000135143 fastq.gz 10.5 GB
EGAF50000135144 fastq.gz 10.1 GB
EGAF50000135145 fastq.gz 10.9 GB
EGAF50000135146 fastq.gz 11.2 GB
EGAF50000135147 fastq.gz 9.1 GB
EGAF50000135148 fastq.gz 9.4 GB
EGAF50000135149 fastq.gz 10.2 GB
EGAF50000135150 fastq.gz 9.7 GB
EGAF50000135151 fastq.gz 9.7 GB
EGAF50000135152 fastq.gz 10.1 GB
EGAF50000135153 fastq.gz 9.0 GB
EGAF50000135154 fastq.gz 9.3 GB
EGAF50000135155 fastq.gz 9.9 GB
EGAF50000135156 fastq.gz 9.7 GB
EGAF50000135157 fastq.gz 9.2 GB
EGAF50000135158 fastq.gz 9.6 GB
EGAF50000135159 fastq.gz 9.2 GB
EGAF50000135160 fastq.gz 8.5 GB
EGAF50000135161 fastq.gz 10.0 GB
EGAF50000135162 fastq.gz 9.6 GB
EGAF50000135163 fastq.gz 10.6 GB
EGAF50000135164 fastq.gz 11.1 GB
EGAF50000135165 fastq.gz 9.3 GB
EGAF50000135166 fastq.gz 8.9 GB
EGAF50000135167 fastq.gz 12.6 GB
EGAF50000135168 fastq.gz 12.2 GB
EGAF50000135169 fastq.gz 11.7 GB
EGAF50000135170 fastq.gz 12.4 GB
EGAF50000135171 fastq.gz 10.4 GB
EGAF50000135172 fastq.gz 9.9 GB
EGAF50000135173 fastq.gz 9.7 GB
EGAF50000135174 fastq.gz 9.4 GB
EGAF50000135175 fastq.gz 10.8 GB
EGAF50000135176 fastq.gz 11.2 GB
EGAF50000135177 fastq.gz 10.7 GB
EGAF50000135178 fastq.gz 11.0 GB
EGAF50000135179 fastq.gz 9.6 GB
EGAF50000135180 fastq.gz 9.2 GB
EGAF50000135181 fastq.gz 9.3 GB
EGAF50000135182 fastq.gz 9.6 GB
EGAF50000135183 fastq.gz 10.4 GB
EGAF50000135184 fastq.gz 10.7 GB
EGAF50000135185 fastq.gz 10.7 GB
EGAF50000135186 fastq.gz 10.4 GB
EGAF50000135187 fastq.gz 8.8 GB
EGAF50000135188 fastq.gz 9.0 GB
EGAF50000135189 fastq.gz 12.9 GB
EGAF50000135190 fastq.gz 13.3 GB
EGAF50000135191 fastq.gz 9.3 GB
EGAF50000135192 fastq.gz 9.1 GB
EGAF50000135193 fastq.gz 10.3 GB
EGAF50000135194 fastq.gz 10.7 GB
EGAF50000135195 fastq.gz 10.6 GB
EGAF50000135196 fastq.gz 10.4 GB
EGAF50000135197 fastq.gz 13.0 GB
EGAF50000135198 fastq.gz 12.6 GB
EGAF50000135199 fastq.gz 8.2 GB
EGAF50000135200 fastq.gz 8.5 GB
EGAF50000135201 fastq.gz 8.5 GB
EGAF50000135202 fastq.gz 8.7 GB
EGAF50000135203 fastq.gz 9.2 GB
EGAF50000135204 fastq.gz 9.0 GB
EGAF50000135205 fastq.gz 10.1 GB
EGAF50000135206 fastq.gz 9.7 GB
EGAF50000135207 fastq.gz 7.6 GB
EGAF50000135208 fastq.gz 7.9 GB
EGAF50000135209 fastq.gz 9.6 GB
EGAF50000135210 fastq.gz 9.3 GB
EGAF50000135211 fastq.gz 10.6 GB
EGAF50000135212 fastq.gz 10.8 GB
EGAF50000135213 fastq.gz 10.5 GB
EGAF50000135214 fastq.gz 10.1 GB
EGAF50000135215 fastq.gz 12.7 GB
EGAF50000135216 fastq.gz 12.2 GB
EGAF50000135217 fastq.gz 8.6 GB
EGAF50000135218 fastq.gz 8.8 GB
EGAF50000135219 fastq.gz 12.6 GB
EGAF50000135220 fastq.gz 13.3 GB
EGAF50000135221 fastq.gz 12.5 GB
EGAF50000135222 fastq.gz 12.0 GB
EGAF50000135223 fastq.gz 7.9 GB
EGAF50000135224 fastq.gz 8.4 GB
EGAF50000135225 fastq.gz 13.3 GB
EGAF50000135226 fastq.gz 13.6 GB
EGAF50000135227 fastq.gz 9.0 GB
EGAF50000135228 fastq.gz 9.3 GB
EGAF50000135229 fastq.gz 8.8 GB
EGAF50000135230 fastq.gz 8.5 GB
EGAF50000135231 fastq.gz 7.7 GB
EGAF50000135232 fastq.gz 8.0 GB
EGAF50000135233 fastq.gz 8.8 GB
EGAF50000135234 fastq.gz 9.0 GB
EGAF50000135235 fastq.gz 10.5 GB
EGAF50000135236 fastq.gz 10.1 GB
EGAF50000135237 fastq.gz 8.8 GB
EGAF50000135238 fastq.gz 8.5 GB
EGAF50000135239 fastq.gz 8.4 GB
EGAF50000135240 fastq.gz 8.7 GB
EGAF50000135241 fastq.gz 8.2 GB
EGAF50000135242 fastq.gz 8.0 GB
EGAF50000135243 fastq.gz 11.0 GB
EGAF50000135244 fastq.gz 11.3 GB
EGAF50000135245 fastq.gz 9.4 GB
EGAF50000135246 fastq.gz 9.1 GB
EGAF50000135247 fastq.gz 10.2 GB
EGAF50000135248 fastq.gz 10.5 GB
EGAF50000135249 fastq.gz 9.0 GB
EGAF50000135250 fastq.gz 9.3 GB
EGAF50000135251 fastq.gz 8.7 GB
EGAF50000135252 fastq.gz 9.0 GB
EGAF50000135253 fastq.gz 8.1 GB
EGAF50000135254 fastq.gz 8.3 GB
EGAF50000135255 fastq.gz 9.3 GB
EGAF50000135256 fastq.gz 9.8 GB
EGAF50000135257 fastq.gz 9.7 GB
EGAF50000135258 fastq.gz 10.0 GB
EGAF50000135259 fastq.gz 9.6 GB
EGAF50000135260 fastq.gz 9.4 GB
EGAF50000135261 fastq.gz 10.1 GB
EGAF50000135262 fastq.gz 10.4 GB
EGAF50000135263 fastq.gz 7.9 GB
EGAF50000135264 fastq.gz 7.6 GB
EGAF50000135265 fastq.gz 10.1 GB
EGAF50000135266 fastq.gz 10.4 GB
EGAF50000135267 fastq.gz 9.3 GB
EGAF50000135268 fastq.gz 9.6 GB
EGAF50000135269 fastq.gz 9.3 GB
EGAF50000135270 fastq.gz 9.6 GB
EGAF50000135271 fastq.gz 9.0 GB
EGAF50000135272 fastq.gz 9.3 GB
EGAF50000135273 fastq.gz 9.8 GB
EGAF50000135274 fastq.gz 10.1 GB
EGAF50000135275 fastq.gz 10.1 GB
EGAF50000135276 fastq.gz 9.8 GB
EGAF50000135277 fastq.gz 10.1 GB
EGAF50000135278 fastq.gz 10.3 GB
EGAF50000135279 fastq.gz 9.5 GB
EGAF50000135280 fastq.gz 10.0 GB
EGAF50000135281 fastq.gz 10.0 GB
EGAF50000135282 fastq.gz 9.6 GB
EGAF50000135283 fastq.gz 9.3 GB
EGAF50000135284 fastq.gz 9.6 GB
EGAF50000135285 fastq.gz 8.7 GB
EGAF50000135286 fastq.gz 8.9 GB
EGAF50000135287 fastq.gz 9.6 GB
EGAF50000135288 fastq.gz 9.9 GB
EGAF50000135289 fastq.gz 10.5 GB
EGAF50000135290 fastq.gz 10.9 GB
EGAF50000135291 fastq.gz 8.5 GB
EGAF50000135292 fastq.gz 8.2 GB
EGAF50000135293 fastq.gz 11.4 GB
EGAF50000135294 fastq.gz 11.0 GB
EGAF50000135295 fastq.gz 9.2 GB
EGAF50000135296 fastq.gz 9.5 GB
EGAF50000135297 fastq.gz 12.1 GB
EGAF50000135298 fastq.gz 11.6 GB
EGAF50000135299 fastq.gz 11.1 GB
EGAF50000135300 fastq.gz 10.7 GB
EGAF50000135301 fastq.gz 10.7 GB
EGAF50000135302 fastq.gz 11.0 GB
EGAF50000135303 fastq.gz 10.6 GB
EGAF50000135304 fastq.gz 10.9 GB
EGAF50000135305 fastq.gz 9.8 GB
EGAF50000135306 fastq.gz 10.1 GB
EGAF50000135307 fastq.gz 11.0 GB
EGAF50000135308 fastq.gz 10.6 GB
EGAF50000135309 fastq.gz 8.9 GB
EGAF50000135310 fastq.gz 8.5 GB
EGAF50000135311 fastq.gz 9.0 GB
EGAF50000135312 fastq.gz 8.7 GB
EGAF50000135313 fastq.gz 9.5 GB
EGAF50000135314 fastq.gz 9.9 GB
EGAF50000135315 fastq.gz 9.2 GB
EGAF50000135316 fastq.gz 8.9 GB
EGAF50000135317 fastq.gz 8.4 GB
EGAF50000135318 fastq.gz 8.8 GB
EGAF50000135319 fastq.gz 11.4 GB
EGAF50000135320 fastq.gz 11.7 GB
EGAF50000135321 fastq.gz 10.3 GB
EGAF50000135322 fastq.gz 10.7 GB
EGAF50000135323 fastq.gz 11.4 GB
EGAF50000135324 fastq.gz 11.7 GB
EGAF50000135325 fastq.gz 8.9 GB
EGAF50000135326 fastq.gz 9.3 GB
EGAF50000135327 fastq.gz 8.0 GB
EGAF50000135328 fastq.gz 7.7 GB
EGAF50000135329 fastq.gz 8.2 GB
EGAF50000135330 fastq.gz 8.0 GB
EGAF50000135331 fastq.gz 9.1 GB
EGAF50000135332 fastq.gz 8.8 GB
EGAF50000135333 fastq.gz 9.3 GB
EGAF50000135334 fastq.gz 9.6 GB
EGAF50000135335 fastq.gz 10.7 GB
EGAF50000135336 fastq.gz 10.3 GB
EGAF50000135337 fastq.gz 8.8 GB
EGAF50000135338 fastq.gz 9.3 GB
EGAF50000135339 fastq.gz 8.9 GB
EGAF50000135340 fastq.gz 9.2 GB
EGAF50000135341 fastq.gz 8.4 GB
EGAF50000135342 fastq.gz 8.8 GB
EGAF50000135343 fastq.gz 9.1 GB
EGAF50000135344 fastq.gz 8.7 GB
EGAF50000135345 fastq.gz 9.7 GB
EGAF50000135346 fastq.gz 9.5 GB
EGAF50000135347 fastq.gz 8.2 GB
EGAF50000135348 fastq.gz 8.6 GB
EGAF50000135349 fastq.gz 8.3 GB
EGAF50000135350 fastq.gz 8.6 GB
EGAF50000135351 fastq.gz 10.5 GB
EGAF50000135352 fastq.gz 11.0 GB
EGAF50000135353 fastq.gz 10.0 GB
EGAF50000135354 fastq.gz 9.7 GB
EGAF50000135355 fastq.gz 9.3 GB
EGAF50000135356 fastq.gz 9.6 GB
EGAF50000135357 fastq.gz 9.7 GB
EGAF50000135358 fastq.gz 10.1 GB
EGAF50000135359 fastq.gz 10.2 GB
EGAF50000135360 fastq.gz 10.6 GB
EGAF50000135361 fastq.gz 11.8 GB
EGAF50000135362 fastq.gz 11.2 GB
EGAF50000135363 fastq.gz 10.0 GB
EGAF50000135364 fastq.gz 10.2 GB
EGAF50000135365 fastq.gz 11.0 GB
EGAF50000135366 fastq.gz 11.3 GB
EGAF50000135367 fastq.gz 8.8 GB
EGAF50000135368 fastq.gz 9.1 GB
EGAF50000135369 fastq.gz 22.5 GB
EGAF50000135370 fastq.gz 23.1 GB
EGAF50000135371 fastq.gz 22.8 GB
EGAF50000135372 fastq.gz 23.5 GB
EGAF50000135373 fastq.gz 24.2 GB
EGAF50000135374 fastq.gz 23.2 GB
EGAF50000135375 fastq.gz 27.0 GB
EGAF50000135376 fastq.gz 25.7 GB
EGAF50000135377 fastq.gz 23.9 GB
EGAF50000135378 fastq.gz 24.7 GB
EGAF50000135379 fastq.gz 22.3 GB
EGAF50000135380 fastq.gz 22.6 GB
EGAF50000135381 fastq.gz 23.3 GB
EGAF50000135382 fastq.gz 23.7 GB
EGAF50000135383 fastq.gz 23.0 GB
EGAF50000135384 fastq.gz 24.0 GB
EGAF50000135385 fastq.gz 23.3 GB
EGAF50000135386 fastq.gz 24.1 GB
EGAF50000135387 fastq.gz 22.4 GB
EGAF50000135388 fastq.gz 22.9 GB
EGAF50000135389 fastq.gz 25.8 GB
EGAF50000135390 fastq.gz 24.4 GB
EGAF50000135391 fastq.gz 24.3 GB
EGAF50000135392 fastq.gz 25.7 GB
EGAF50000135393 fastq.gz 27.9 GB
EGAF50000135394 fastq.gz 27.2 GB
EGAF50000135395 fastq.gz 27.4 GB
EGAF50000135396 fastq.gz 26.6 GB
EGAF50000135397 fastq.gz 26.9 GB
EGAF50000135398 fastq.gz 26.4 GB
EGAF50000135399 fastq.gz 22.3 GB
EGAF50000135400 fastq.gz 22.8 GB
EGAF50000135401 fastq.gz 22.5 GB
EGAF50000135402 fastq.gz 23.0 GB
EGAF50000135403 fastq.gz 27.9 GB
EGAF50000135404 fastq.gz 27.4 GB
EGAF50000135405 fastq.gz 26.0 GB
EGAF50000135406 fastq.gz 25.6 GB
EGAF50000135407 fastq.gz 26.0 GB
EGAF50000135408 fastq.gz 26.7 GB
EGAF50000135409 fastq.gz 26.3 GB
EGAF50000135410 fastq.gz 25.0 GB
EGAF50000135411 fastq.gz 26.1 GB
EGAF50000135412 fastq.gz 25.1 GB
EGAF50000135413 fastq.gz 66.1 GB
EGAF50000135414 fastq.gz 67.5 GB
EGAF50000135415 fastq.gz 67.6 GB
EGAF50000135416 fastq.gz 66.1 GB
EGAF50000135417 fastq.gz 65.7 GB
EGAF50000135418 fastq.gz 67.7 GB
EGAF50000135419 bam 22.6 GB
EGAF50000135420 bam 23.1 GB
EGAF50000135421 bam 21.7 GB
EGAF50000135422 bam 20.8 GB
EGAF50000135423 bam 21.7 GB
EGAF50000135424 bam 19.6 GB
EGAF50000135425 fastq.gz 10.8 GB
EGAF50000135426 fastq.gz 10.4 GB
EGAF50000135427 fastq.gz 86.9 GB
EGAF50000135428 fastq.gz 77.8 GB
EGAF50000135429 fastq.gz 91.7 GB
EGAF50000135430 fastq.gz 87.0 GB
EGAF50000135431 fastq.gz 100.9 GB
EGAF50000135432 fastq.gz 92.0 GB
EGAF50000135433 fastq.gz 96.4 GB
EGAF50000135434 fastq.gz 9.3 GB
EGAF50000135435 fastq.gz 10.0 GB
EGAF50000135436 fastq.gz 11.5 GB
EGAF50000135437 fastq.gz 11.3 GB
EGAF50000135438 fastq.gz 9.4 GB
EGAF50000135439 fastq.gz 9.1 GB
EGAF50000135440 fastq.gz 11.6 GB
EGAF50000135441 fastq.gz 12.3 GB
352 Files (6.3 TB)