About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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CRC Patient-derived-organoids Whole Genome Sequencing

Whole Genome Sequencing raw paired-ends reads for 20 matched colorectal patient-derived-organoids (normal and tumor). Tumor samples were obtained from patients treated at Niguarda Cancer Center, (Milano, Italy) and Candiolo Cancer Institute (Candiolo, Turin, Italy).

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DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0005575

General policy for Molecular Oncology datasets

Molecular Oncology laboratory at University of Turin - Italy. Dataset available on request

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000426 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000142635 fastq.gz 47.1 GB Report
EGAF50000142636 fastq.gz 50.6 GB Report
EGAF50000142637 fastq.gz 27.5 GB Report
EGAF50000142638 fastq.gz 29.6 GB Report
EGAF50000142639 fastq.gz 31.9 GB Report
EGAF50000142640 fastq.gz 34.1 GB Report
EGAF50000142641 fastq.gz 25.9 GB Report
EGAF50000142642 fastq.gz 28.1 GB Report
EGAF50000142643 fastq.gz 22.0 GB Report
EGAF50000142644 fastq.gz 23.7 GB Report
EGAF50000142645 fastq.gz 28.5 GB Report
EGAF50000142646 fastq.gz 30.4 GB Report
EGAF50000142647 fastq.gz 21.1 GB Report
EGAF50000142648 fastq.gz 22.6 GB Report
EGAF50000142649 fastq.gz 58.7 GB Report
EGAF50000142650 fastq.gz 64.2 GB Report
EGAF50000142651 fastq.gz 26.0 GB Report
EGAF50000142652 fastq.gz 28.2 GB Report
EGAF50000142653 fastq.gz 41.5 GB Report
EGAF50000142654 fastq.gz 39.2 GB Report
EGAF50000142655 fastq.gz 28.4 GB Report
EGAF50000142656 fastq.gz 26.2 GB Report
EGAF50000142657 fastq.gz 42.1 GB Report
EGAF50000142658 fastq.gz 39.5 GB Report
EGAF50000142659 fastq.gz 25.6 GB Report
EGAF50000142660 fastq.gz 27.4 GB Report
EGAF50000142661 fastq.gz 26.1 GB Report
EGAF50000142662 fastq.gz 28.1 GB Report
EGAF50000142663 fastq.gz 63.7 GB Report
EGAF50000142664 fastq.gz 69.3 GB Report
EGAF50000142665 fastq.gz 23.9 GB Report
EGAF50000142666 fastq.gz 25.7 GB Report
EGAF50000142667 fastq.gz 34.2 GB Report
EGAF50000142668 fastq.gz 31.8 GB Report
EGAF50000142669 fastq.gz 28.7 GB Report
EGAF50000142670 fastq.gz 26.6 GB Report
EGAF50000142671 fastq.gz 35.3 GB Report
EGAF50000142672 fastq.gz 37.2 GB Report
EGAF50000142673 fastq.gz 24.1 GB Report
EGAF50000142674 fastq.gz 26.1 GB Report
EGAF50000142675 fastq.gz 28.1 GB Report
EGAF50000142676 fastq.gz 30.7 GB Report
EGAF50000142677 fastq.gz 24.2 GB Report
EGAF50000142678 fastq.gz 22.9 GB Report
EGAF50000142679 fastq.gz 21.6 GB Report
EGAF50000142680 fastq.gz 23.1 GB Report
EGAF50000142681 fastq.gz 74.0 GB Report
EGAF50000142682 fastq.gz 80.3 GB Report
EGAF50000142683 fastq.gz 9.8 GB Report
EGAF50000142684 fastq.gz 10.8 GB Report
EGAF50000142685 fastq.gz 44.1 GB Report
EGAF50000142686 fastq.gz 47.2 GB Report
EGAF50000142687 fastq.gz 22.4 GB Report
EGAF50000142688 fastq.gz 24.1 GB Report
EGAF50000142689 fastq.gz 58.1 GB Report
EGAF50000142690 fastq.gz 54.8 GB Report
EGAF50000142691 fastq.gz 34.8 GB Report
EGAF50000142692 fastq.gz 37.2 GB Report
EGAF50000142693 fastq.gz 25.4 GB Report
EGAF50000142694 fastq.gz 27.5 GB Report
EGAF50000142695 fastq.gz 40.0 GB Report
EGAF50000142696 fastq.gz 42.7 GB Report
EGAF50000142697 fastq.gz 46.3 GB Report
EGAF50000142698 fastq.gz 49.2 GB Report
EGAF50000142699 fastq.gz 56.6 GB Report
EGAF50000142700 fastq.gz 63.5 GB Report
EGAF50000142701 fastq.gz 22.1 GB Report
EGAF50000142702 fastq.gz 23.9 GB Report
EGAF50000142703 fastq.gz 28.2 GB Report
EGAF50000142704 fastq.gz 25.7 GB Report
EGAF50000142705 fastq.gz 41.6 GB Report
EGAF50000142706 fastq.gz 44.5 GB Report
EGAF50000142707 fastq.gz 28.5 GB Report
EGAF50000142708 fastq.gz 30.9 GB Report
EGAF50000142709 fastq.gz 20.0 GB Report
EGAF50000142710 fastq.gz 21.6 GB Report
EGAF50000142711 fastq.gz 23.5 GB Report
EGAF50000142712 fastq.gz 25.3 GB Report
EGAF50000142713 fastq.gz 35.8 GB Report
EGAF50000142714 fastq.gz 38.2 GB Report
80 Files (2.8 TB)