About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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ERa ChIP-seq in breast healthy, primary cancer and metastatic tissues

ChIP-seq has been perfomed on fresh-frozen tissue derived from healthy breast (HB), primary breast cancer (PB), BCa-derived liver metastasis (LM). Immunoprecipitation has been performed for ERa (sc-542, SantaCruz). Raw paired-end fastq.gz files are provided for both immunoprecipitated DNA and input samples.

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Netherlands Cancer Institute - Antoni van Leeuwenhoek (NKI-AVL) general policy

Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study. The researcher will need to sign a data access agreement with the NKI after approval.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000444 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000152162 fastq.gz 714.0 MB Report
EGAF50000152163 fastq.gz 693.8 MB Report
EGAF50000152164 fastq.gz 732.2 MB Report
EGAF50000152165 fastq.gz 715.4 MB Report
EGAF50000152166 fastq.gz 736.6 MB Report
EGAF50000152167 fastq.gz 752.7 MB Report
EGAF50000152218 fastq.gz 810.9 MB Report
EGAF50000152219 fastq.gz 791.1 MB Report
EGAF50000152220 fastq.gz 878.4 MB Report
EGAF50000152221 fastq.gz 899.6 MB Report
EGAF50000152222 fastq.gz 920.6 MB Report
EGAF50000152223 fastq.gz 897.1 MB Report
EGAF50000152224 fastq.gz 816.7 MB Report
EGAF50000152225 fastq.gz 801.9 MB Report
EGAF50000152226 fastq.gz 716.3 MB Report
EGAF50000152227 fastq.gz 698.0 MB Report
EGAF50000152228 fastq.gz 767.9 MB Report
EGAF50000152229 fastq.gz 753.6 MB Report
EGAF50000152230 fastq.gz 974.9 MB Report
EGAF50000152231 fastq.gz 945.8 MB Report
EGAF50000152232 fastq.gz 726.0 MB Report
EGAF50000152233 fastq.gz 708.0 MB Report
EGAF50000152234 fastq.gz 791.4 MB Report
EGAF50000152235 fastq.gz 777.5 MB Report
EGAF50000152236 fastq.gz 815.3 MB Report
EGAF50000152237 fastq.gz 829.0 MB Report
EGAF50000152238 fastq.gz 993.5 MB Report
EGAF50000152239 fastq.gz 975.4 MB Report
EGAF50000152240 fastq.gz 827.4 MB Report
EGAF50000152241 fastq.gz 814.0 MB Report
EGAF50000152242 fastq.gz 820.1 MB Report
EGAF50000152243 fastq.gz 804.9 MB Report
EGAF50000152244 fastq.gz 736.7 MB Report
EGAF50000152245 fastq.gz 721.9 MB Report
EGAF50000152246 fastq.gz 848.1 MB Report
EGAF50000152247 fastq.gz 835.8 MB Report
EGAF50000152248 fastq.gz 691.4 MB Report
EGAF50000152249 fastq.gz 683.6 MB Report
EGAF50000152250 fastq.gz 865.5 MB Report
EGAF50000152251 fastq.gz 844.8 MB Report
EGAF50000152252 fastq.gz 964.4 MB Report
EGAF50000152253 fastq.gz 947.3 MB Report
EGAF50000152254 fastq.gz 829.0 MB Report
EGAF50000152255 fastq.gz 851.4 MB Report
44 Files (35.7 GB)