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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WES of precancerous lesions from 10 lynch patients and 3 sporadics

Raw sequencing data of WES that were obtained from precancerous samples as adenoma and MMR-deficient crypts and paired healthy tissue from MSI CRC patients of which 10 are diagnosed with lynch syndrome and 3 had sporadic cancer. These data were analyzed in order to evaluate microsatellite instability though tumorigenesis and associated to splicing deregulation in MSI tumors RNA.

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MSI-Exome-Transcriptome-DAC Team Microsatellites Instability and Cancer, INSERM Hospital Saint-Antoine, Paris 12, France Carte d'identité des tumeurs, French league against cancer, Paris France

Please contact quentin DOT letourneur AT inserm DOT fr with alex DOT duval AT inserm DOT fr as copy so that they can send you the document to complete and consider your data access request. Note that data access request is done per dataset but only one document will be sent if you need more than one.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004863 Cancer Genomics
  • no change to the dataset, updated study title and description
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00008495598 fastq.gz 1.2 GB Report
EGAF00008495600 fastq.gz 1.3 GB Report
EGAF00008495602 fastq.gz 1.8 GB Report
EGAF00008495605 fastq.gz 1.0 GB Report
EGAF00008495607 fastq.gz 1.1 GB Report
EGAF00008495608 fastq.gz 1.9 GB Report
EGAF00008495613 fastq.gz 993.8 MB Report
EGAF00008495614 fastq.gz 1.0 GB Report
EGAF00008495617 fastq.gz 1.1 GB Report
EGAF00008495620 fastq.gz 1.2 GB Report
EGAF00008495624 fastq.gz 3.5 GB Report
EGAF00008495626 fastq.gz 1.3 GB Report
EGAF00008495628 fastq.gz 2.9 GB Report
EGAF00008495629 fastq.gz 3.6 GB Report
EGAF00008495630 fastq.gz 2.8 GB Report
EGAF00008495632 fastq.gz 1.0 GB Report
EGAF00008495636 fastq.gz 3.3 GB Report
EGAF00008495638 fastq.gz 2.9 GB Report
EGAF00008495639 fastq.gz 3.3 GB Report
EGAF00008495644 fastq.gz 1.3 GB Report
EGAF00008495645 fastq.gz 1.0 GB Report
EGAF00008495647 fastq.gz 2.8 GB Report
EGAF00008495648 fastq.gz 2.8 GB Report
EGAF00008495650 fastq.gz 1.0 GB Report
EGAF00008495653 fastq.gz 1.1 GB Report
EGAF00008495655 fastq.gz 3.0 GB Report
EGAF00008495656 fastq.gz 3.6 GB Report
EGAF00008495659 fastq.gz 3.7 GB Report
EGAF00008495671 fastq.gz 6.8 GB Report
EGAF00008495673 fastq.gz 6.7 GB
EGAF00008495673 fastq.gz 6.7 GB Report
EGAF00008495674 fastq.gz 4.6 GB Report
EGAF00008495678 fastq.gz 7.0 GB Report
EGAF00008495680 fastq.gz 7.6 GB Report
EGAF00008495682 fastq.gz 7.2 GB Report
EGAF00008495684 fastq.gz 6.9 GB Report
EGAF00008495685 fastq.gz 7.0 GB Report
EGAF00008495688 fastq.gz 1.7 GB Report
EGAF00008495689 fastq.gz 7.4 GB
EGAF00008495689 fastq.gz 7.4 GB Report
EGAF00008495694 fastq.gz 2.4 GB Report
EGAF00008495696 fastq.gz 8.6 GB Report
EGAF00008495697 fastq.gz 10.4 GB
EGAF00008495697 fastq.gz 10.4 GB Report
EGAF00008495699 fastq.gz 2.2 GB Report
EGAF00008495704 fastq.gz 8.9 GB
EGAF00008495704 fastq.gz 8.9 GB Report
EGAF00008495707 fastq.gz 1.3 GB Report
EGAF00008495712 fastq.gz 10.9 GB Report
EGAF00008495716 fastq.gz 6.7 GB Report
EGAF00008495722 fastq.gz 10.5 GB Report
EGAF00008495727 fastq.gz 7.0 GB Report
EGAF00008495728 fastq.gz 10.8 GB Report
EGAF00008495732 fastq.gz 4.5 GB Report
EGAF00008495738 fastq.gz 2.4 GB Report
EGAF00008495739 fastq.gz 2.3 GB Report
EGAF00008495747 fastq.gz 1.3 GB Report
EGAF00008495751 fastq.gz 10.1 GB
EGAF00008495751 fastq.gz 10.1 GB Report
EGAF00008495760 fastq.gz 7.7 GB Report
EGAF00008495765 fastq.gz 12.1 GB Report
EGAF00008495774 fastq.gz 8.0 GB Report
EGAF00008495780 fastq.gz 14.1 GB Report
EGAF00008495785 fastq.gz 9.6 GB Report
EGAF00008495805 fastq.gz 1.6 GB Report
EGAF00008495809 fastq.gz 2.1 GB Report
EGAF00008495813 fastq.gz 6.4 GB Report
EGAF00008495820 fastq.gz 12.5 GB Report
EGAF00008495833 fastq.gz 10.4 GB Report
EGAF00008495838 fastq.gz 2.4 GB Report
EGAF00008495841 fastq.gz 5.6 GB Report
EGAF00008495853 fastq.gz 9.0 GB Report
EGAF00008495879 fastq.gz 5.8 GB Report
EGAF00008495892 fastq.gz 9.3 GB Report
EGAF00008495905 fastq.gz 13.6 GB Report
EGAF00008495907 fastq.gz 9.3 GB Report
EGAF00008495977 fastq.gz 6.8 GB Report
77 Files (410.3 GB)