Need Help?

Clinical panel sequencing of cancer of unknown primary using Comprehensive cancer panel (CCP)

This database includes comprehensive cancer panel (CCP) on paired tumour and germline DNA from cancer of unknown primary samples, all of which are matched to WGS data under this study. This data was used to compare biomarker yield against what was achieved with WGS. This dataset contains n=34 tumour-germline paired samples. All samples are in BAM format aligned with GRCh38 reference genome.

Request Access

University of Melbourne Cancer Research Centre (UMCCR) Data Access Committee (DAC) request form

University of Melbourne Cancer Research Centre (UMCCR) Data Access Committee (DAC) request form Email the completed form to: UMCCR-DAC@unimelb.edu.au The following form is to be used to submit an expression of interest to access data under the purview of the UMCCR-DAC and does not represent a binding data access agreement. REQUESTOR INFORMATION Graduate research student requestors must include their supervisor or a senior researcher as the Principal Investigator. Please use institutional email addresses only. Requestor Name: Job Title/Position: Department and Institution: Telephone: Email: Postal Address: Principal Investigator (if different to the Requestor) Name: Job Title/Position: Department and Institution: Telephone: Email: Postal Address: Authorised Institutional Representative Name: Job Title/Position: Institution: Telephone: Email: Postal Address: DATA REQUESTED Data description Include the EGA study and dataset accession number(s), other data identifier(s) and/or the name of the publication describing the data. Data type Is the requested data identifiable? (Whole-genome sequencing data is not considered identifiable.) ☐ Yes ☐ No PROJECT DETAILS Project description Describe the project in which the data will be used (500 words maximum). This should include specific details of the aims and what you plan to do with the data. Members of the project team requiring access to the data. Include the following information: Name Job title/position Institution Email Supervisor Feasibility Describe previous experience in this field of research and/or in similar projects by the requestor, principal investigator and other members of the project team. ETHICS APPROVAL Does this project require approval from a Human Research Ethics Committee (HREC) or comparable committee? ☐ Yes ☐ No If yes, name the HREC from which approval has been requested or obtained and attach relevant documentation (ethics application and/or approval documentation). If no, please explain why ethics approval is not required.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000452 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000156773 bam 3.1 GB
EGAF50000156774 bam 3.5 GB
EGAF50000156775 bam 2.8 GB
EGAF50000156776 bam 3.3 GB
EGAF50000156777 bam 4.2 GB
EGAF50000156778 bam 4.2 GB
EGAF50000156779 bai 3.4 MB
EGAF50000156780 bai 7.2 MB
EGAF50000156781 bai 3.5 MB
EGAF50000156782 bai 6.8 MB
EGAF50000156783 bai 7.2 MB
EGAF50000156784 bam 2.7 GB
EGAF50000156785 bam 4.4 GB
EGAF50000156786 bai 3.0 MB
EGAF50000156787 bam 4.6 GB
EGAF50000156788 bai 7.3 MB
EGAF50000156789 bam 5.2 GB
EGAF50000156790 bai 3.0 MB
EGAF50000156791 bam 4.3 GB
EGAF50000156792 bai 3.3 MB
EGAF50000156793 bam 5.5 GB
EGAF50000156794 bai 3.0 MB
EGAF50000156795 bam 4.8 GB
EGAF50000156796 bai 2.9 MB
EGAF50000156797 bam 2.4 GB
EGAF50000156798 bai 6.7 MB
EGAF50000156799 bam 5.5 GB
EGAF50000156800 bai 2.9 MB
EGAF50000156801 bam 2.9 GB
EGAF50000156802 bai 3.4 MB
EGAF50000156803 bam 3.1 GB
EGAF50000156804 bai 3.4 MB
EGAF50000156805 bam 3.6 GB
EGAF50000156806 bai 6.9 MB
EGAF50000156807 bam 3.0 GB
EGAF50000156808 bai 6.9 MB
EGAF50000156809 bam 2.9 GB
EGAF50000156810 bai 3.2 MB
EGAF50000156811 bam 2.7 GB
EGAF50000156812 bai 6.7 MB
EGAF50000156813 bam 3.8 GB
EGAF50000156814 bai 7.1 MB
EGAF50000156815 bam 3.5 GB
EGAF50000156816 bai 3.2 MB
EGAF50000156817 bam 4.3 GB
EGAF50000156818 bai 7.1 MB
EGAF50000156819 bam 3.7 GB
EGAF50000156820 bai 3.3 MB
EGAF50000156821 bam 5.4 GB
EGAF50000156822 bai 7.2 MB
EGAF50000156823 bam 3.2 GB
EGAF50000156824 bai 3.7 MB
EGAF50000156825 bam 3.4 GB
EGAF50000156826 bai 6.8 MB
EGAF50000156827 bam 2.7 GB
EGAF50000156828 bai 3.4 MB
EGAF50000156829 bam 3.3 GB
EGAF50000156830 bai 6.8 MB
EGAF50000156831 bam 2.5 GB
EGAF50000156832 bai 6.8 MB
EGAF50000156833 bam 2.1 GB
EGAF50000156834 bai 6.6 MB
EGAF50000156835 bam 4.3 GB
EGAF50000156836 bai 7.2 MB
EGAF50000156837 bam 2.8 GB
EGAF50000156838 bai 3.4 MB
EGAF50000156839 bam 1.4 GB
EGAF50000156840 bai 4.1 MB
EGAF50000156841 bam 1.5 GB
EGAF50000156842 bai 3.8 MB
EGAF50000156843 bam 2.1 GB
EGAF50000156844 bai 6.6 MB
EGAF50000156845 bam 1.8 GB
EGAF50000156846 bai 6.6 MB
EGAF50000156847 bam 1.7 GB
EGAF50000156848 bai 3.8 MB
EGAF50000156849 bam 2.0 GB
EGAF50000156850 bai 6.7 MB
EGAF50000156851 bam 2.2 GB
EGAF50000156852 bai 6.6 MB
EGAF50000156853 bam 1.8 GB
EGAF50000156854 bai 6.6 MB
EGAF50000156855 bam 1.6 GB
EGAF50000156856 bai 6.5 MB
EGAF50000156857 bam 2.4 GB
EGAF50000156858 bai 3.2 MB
EGAF50000156859 bam 2.0 GB
EGAF50000156860 bai 6.7 MB
EGAF50000156861 bam 2.6 GB
EGAF50000156862 bai 2.9 MB
EGAF50000156863 bam 2.1 GB
EGAF50000156864 bai 3.2 MB
EGAF50000156865 bam 1.3 GB
EGAF50000156866 bai 3.9 MB
EGAF50000156867 bam 1.5 GB
EGAF50000156868 bai 4.4 MB
EGAF50000156869 bam 1.5 GB
EGAF50000156870 bai 4.1 MB
EGAF50000156871 bam 1.4 GB
EGAF50000156872 bai 6.4 MB
EGAF50000156873 bam 1.4 GB
EGAF50000156874 bai 4.3 MB
EGAF50000156875 bam 2.0 GB
EGAF50000156876 bai 6.6 MB
EGAF50000156877 bam 1.5 GB
EGAF50000156878 bai 3.9 MB
EGAF50000156879 bam 1.5 GB
EGAF50000156880 bai 3.8 MB
EGAF50000156881 bam 1.3 GB
EGAF50000156882 bai 4.0 MB
EGAF50000156883 bam 2.2 GB
EGAF50000156884 bai 3.3 MB
EGAF50000156885 bam 2.3 GB
EGAF50000156886 bai 6.8 MB
EGAF50000156887 bam 1.4 GB
EGAF50000156888 bai 6.5 MB
EGAF50000156889 bam 2.0 GB
EGAF50000156890 bai 3.5 MB
EGAF50000156891 bam 1.8 GB
EGAF50000156892 bai 3.8 MB
EGAF50000156893 bam 2.8 GB
EGAF50000156894 bai 6.8 MB
EGAF50000156895 bam 2.3 GB
EGAF50000156896 bai 6.7 MB
EGAF50000156897 bam 1.8 GB
EGAF50000156898 bai 6.6 MB
EGAF50000156899 bam 1.3 GB
EGAF50000156900 bai 6.5 MB
EGAF50000156901 bam 1.1 GB
EGAF50000156902 bai 6.4 MB
EGAF50000156903 bam 1.3 GB
EGAF50000156904 bai 6.5 MB
EGAF50000156905 bam 1.4 GB
EGAF50000156906 bai 4.0 MB
EGAF50000157005 bai 3.3 MB
EGAF50000157006 bai 6.8 MB
136 Files (184.1 GB)