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Clinical panel sequencing of cancer of unknown primary using TruSight Oncology 500 (TSO500)

TruSight Oncology 500 (TSO500) cancer panel sequencing data on paired tumour and germline DNA from cancer of unknown primary samples. All of the samples in this dataset are matched to WGS data. This data was used to compare biomarker yield against what was achieved with WGS and contains n=51 tumour-only samples. All samples are in BAM format aligned with GRCh38 reference genome.

Request Access

University of Melbourne Cancer Research Centre (UMCCR) Data Access Committee (DAC) request form

University of Melbourne Cancer Research Centre (UMCCR) Data Access Committee (DAC) request form Email the completed form to: UMCCR-DAC@unimelb.edu.au The following form is to be used to submit an expression of interest to access data under the purview of the UMCCR-DAC and does not represent a binding data access agreement. REQUESTOR INFORMATION Graduate research student requestors must include their supervisor or a senior researcher as the Principal Investigator. Please use institutional email addresses only. Requestor Name: Job Title/Position: Department and Institution: Telephone: Email: Postal Address: Principal Investigator (if different to the Requestor) Name: Job Title/Position: Department and Institution: Telephone: Email: Postal Address: Authorised Institutional Representative Name: Job Title/Position: Institution: Telephone: Email: Postal Address: DATA REQUESTED Data description Include the EGA study and dataset accession number(s), other data identifier(s) and/or the name of the publication describing the data. Data type Is the requested data identifiable? (Whole-genome sequencing data is not considered identifiable.) ☐ Yes ☐ No PROJECT DETAILS Project description Describe the project in which the data will be used (500 words maximum). This should include specific details of the aims and what you plan to do with the data. Members of the project team requiring access to the data. Include the following information: Name Job title/position Institution Email Supervisor Feasibility Describe previous experience in this field of research and/or in similar projects by the requestor, principal investigator and other members of the project team. ETHICS APPROVAL Does this project require approval from a Human Research Ethics Committee (HREC) or comparable committee? ☐ Yes ☐ No If yes, name the HREC from which approval has been requested or obtained and attach relevant documentation (ethics application and/or approval documentation). If no, please explain why ethics approval is not required.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000452 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000156769 bam 7.6 GB
EGAF50000156770 bai 3.5 MB
EGAF50000156771 bam 4.6 GB
EGAF50000156772 bai 2.7 MB
EGAF50000156907 bam 4.2 GB
EGAF50000156908 bai 2.8 MB
EGAF50000156909 bam 3.6 GB
EGAF50000156910 bai 4.0 MB
EGAF50000156911 bam 4.3 GB
EGAF50000156912 bai 3.0 MB
EGAF50000156913 bam 4.1 GB
EGAF50000156914 bai 3.5 MB
EGAF50000156915 bam 4.6 GB
EGAF50000156916 bai 3.5 MB
EGAF50000156917 bam 3.9 GB
EGAF50000156918 bai 2.8 MB
EGAF50000156919 bai 2.6 MB
EGAF50000156920 bam 5.1 GB
EGAF50000156921 bam 5.1 GB
EGAF50000156922 bai 3.1 MB
EGAF50000156923 bam 4.5 GB
EGAF50000156924 bai 3.7 MB
EGAF50000156925 bam 2.9 GB
EGAF50000156926 bai 4.2 MB
EGAF50000156927 bam 4.7 GB
EGAF50000156928 bai 2.9 MB
EGAF50000156929 bam 5.4 GB
EGAF50000156930 bai 2.7 MB
EGAF50000156931 bam 5.4 GB
EGAF50000156932 bai 3.3 MB
EGAF50000156933 bam 3.7 GB
EGAF50000156934 bai 4.2 MB
EGAF50000156935 bai 3.2 MB
EGAF50000156936 bam 4.8 GB
EGAF50000156937 bai 2.8 MB
EGAF50000156938 bam 3.9 GB
EGAF50000156939 bam 4.1 GB
EGAF50000156940 bai 3.3 MB
EGAF50000156941 bam 5.5 GB
EGAF50000156942 bai 3.5 MB
EGAF50000156943 bam 5.3 GB
EGAF50000156944 bai 3.0 MB
EGAF50000156945 bam 4.5 GB
EGAF50000156946 bai 3.8 MB
EGAF50000156947 bam 4.4 GB
EGAF50000156948 bai 3.8 MB
EGAF50000156949 bam 4.6 GB
EGAF50000156950 bai 3.6 MB
EGAF50000156951 bam 5.0 GB
EGAF50000156952 bai 2.8 MB
EGAF50000156953 bai 3.2 MB
EGAF50000156954 bam 5.0 GB
EGAF50000156955 bam 4.2 GB
EGAF50000156956 bai 3.4 MB
EGAF50000156957 bam 4.3 GB
EGAF50000156958 bai 2.9 MB
EGAF50000156959 bam 4.2 GB
EGAF50000156960 bai 2.8 MB
EGAF50000156961 bam 4.7 GB
EGAF50000156962 bai 2.6 MB
EGAF50000156963 bam 5.8 GB
EGAF50000156964 bai 2.7 MB
EGAF50000156965 bam 3.5 GB
EGAF50000156966 bai 3.9 MB
EGAF50000156967 bam 5.8 GB
EGAF50000156968 bai 3.0 MB
EGAF50000156969 bam 4.1 GB
EGAF50000156970 bai 2.8 MB
EGAF50000156971 bam 5.5 GB
EGAF50000156972 bai 3.6 MB
EGAF50000156973 bam 5.8 GB
EGAF50000156974 bai 2.6 MB
EGAF50000156975 bam 5.0 GB
EGAF50000156976 bai 3.1 MB
EGAF50000156977 bam 3.9 GB
EGAF50000156978 bai 3.3 MB
EGAF50000156979 bam 4.1 GB
EGAF50000156980 bai 3.5 MB
EGAF50000156981 bam 5.4 GB
EGAF50000156982 bai 3.7 MB
EGAF50000156983 bam 6.7 GB
EGAF50000156984 bai 2.5 MB
EGAF50000156985 bam 1.4 GB
EGAF50000156986 bai 4.7 MB
EGAF50000156987 bam 6.3 GB
EGAF50000156988 bai 2.9 MB
EGAF50000156989 bam 5.1 GB
EGAF50000156990 bai 2.9 MB
EGAF50000156991 bam 2.7 GB
EGAF50000156992 bai 3.6 MB
EGAF50000156993 bam 3.1 GB
EGAF50000156994 bai 3.9 MB
EGAF50000156995 bam 3.5 GB
EGAF50000156996 bai 3.8 MB
EGAF50000156997 bam 4.7 GB
EGAF50000156998 bai 3.7 MB
EGAF50000156999 bam 4.9 GB
EGAF50000157000 bai 2.5 MB
EGAF50000157001 bam 5.7 GB
EGAF50000157002 bai 3.5 MB
EGAF50000157003 bam 5.8 GB
EGAF50000157004 bai 2.9 MB
102 Files (237.4 GB)