Spatial transcriptomics of hepatoblastoma
10X Genomics Visium Spatial transcriptomics analysis of hepatoblastoma and adjacent normal liver. Spatial data of normal liver and PT2 (fastq files), and and PT13, PT14 and PT16 (bam files) using the Visium Spatial Gene Expression Solution. All samples, except PT13, were collected post-chemotherapy.
- 16/09/2024
- 5 samples
- DAC: EGAC00001001864
- Technology: Illumina NovaSeq 6000
Data Access Agreement Princess Máxima Center for pediatric oncology
The Princess Maxima Center for pediatric oncology default access policy to enable re-production of research and re-use of data for scientific purposes. Please contact the DAC (EGAC00001001864) for the most up to date policies.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000561 | Transcriptome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
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|---|---|---|---|---|
| EGAF50000187917 | bam | 3.8 GB | Report |
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| EGAF50000187918 | bai | 3.8 MB |
|
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| EGAF50000187919 | bam | 5.1 GB | Report |
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| EGAF50000187920 | bai | 3.1 MB |
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| EGAF50000187921 | bam | 5.2 GB | Report |
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| EGAF50000187922 | bai | 3.2 MB |
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| EGAF50000187929 | fastq.gz | 845.7 MB | Report |
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| EGAF50000187930 | fastq.gz | 1.8 GB | Report |
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| EGAF50000187931 | fastq.gz | 852.2 MB | Report |
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| EGAF50000187932 | fastq.gz | 1.8 GB | Report |
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| EGAF50000187933 | fastq.gz | 710.4 MB | Report |
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| EGAF50000187934 | fastq.gz | 1.4 GB | Report |
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| EGAF50000187935 | fastq.gz | 715.0 MB | Report |
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| EGAF50000187936 | fastq.gz | 1.4 GB | Report |
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| 14 Files (23.8 GB) | ||||