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Whole-genome sequencing of tumour, germline and plasma samples from a BRCA1-mutant breast cancer patient

This data set contains the fastq files from whole-genome sequencing of temporally matched tumour (fresh frozen biopsies), blood germline and plasma samples collected from a BRCA1-mutant breast cancer patient to directly compare mutation signature analysis using gold-standard tumour-germline paired variant calling with a novel ctDNA-based method (MisMatchFinder).

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All requests to access data will be assessed by the Peter MacCallum Cancer Centre Data Governance Office. Emails may be directed to dgo@petermac.org.

Please email dgo@petermac.org to obtain the detailed policy regarding data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000569 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000188744 fastq.gz 71.2 GB
EGAF50000188745 fastq.gz 68.5 GB
EGAF50000188746 fastq.gz 41.9 GB
EGAF50000188747 fastq.gz 40.0 GB
EGAF50000188748 fastq.gz 42.1 GB
EGAF50000188749 fastq.gz 43.3 GB
6 Files (307.1 GB)