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WGS and WES data of metastatic breast cancer tissues and organoids

Paired-end WGS (x25) and WES data (x2) from metastatic breast cancer organoids, tissues and germline controls. WGS was performed on Illumina NovSeq 6000 and HiSeq X, using Illumina TruSeq Nano DNA kit. WES was performed on Illumina NovSeq 6000 and HiSeq 2000, using Agilent SureSelect XT HS + Human All Exon V7 and SureSelect Human All Exon V6+UTR (hg19).

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001007582 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000190055 fastq.gz 36.8 GB
EGAF50000190056 fastq.gz 42.3 GB
EGAF50000190057 fastq.gz 41.5 GB
EGAF50000190058 fastq.gz 38.0 GB
EGAF50000190059 fastq.gz 37.1 GB
EGAF50000190060 fastq.gz 41.9 GB
EGAF50000190061 fastq.gz 37.2 GB
EGAF50000190062 fastq.gz 42.0 GB
EGAF50000190063 fastq.gz 43.6 GB
EGAF50000190064 fastq.gz 35.7 GB
EGAF50000190065 fastq.gz 38.0 GB
EGAF50000190066 fastq.gz 36.8 GB
EGAF50000190067 fastq.gz 38.8 GB
EGAF50000190068 fastq.gz 41.7 GB
EGAF50000190069 fastq.gz 41.0 GB
EGAF50000190070 fastq.gz 36.5 GB
EGAF50000190071 fastq.gz 38.2 GB
EGAF50000190072 fastq.gz 38.7 GB
EGAF50000190073 fastq.gz 40.4 GB
EGAF50000190074 fastq.gz 38.3 GB
EGAF50000190075 fastq.gz 20.1 GB
EGAF50000190076 fastq.gz 20.7 GB
EGAF50000190077 fastq.gz 19.6 GB
EGAF50000190078 fastq.gz 19.7 GB
EGAF50000190079 fastq.gz 39.5 GB
EGAF50000190080 fastq.gz 38.8 GB
EGAF50000190081 fastq.gz 39.5 GB
EGAF50000190082 fastq.gz 35.5 GB
EGAF50000190083 fastq.gz 38.1 GB
EGAF50000190084 fastq.gz 37.1 GB
EGAF50000190085 fastq.gz 51.6 GB
EGAF50000190086 fastq.gz 47.9 GB
EGAF50000190087 fastq.gz 19.9 GB
EGAF50000190088 fastq.gz 20.2 GB
EGAF50000190094 fastq.gz 20.7 GB
EGAF50000190119 fastq.gz 44.2 GB
EGAF50000190141 fastq.gz 40.4 GB
EGAF50000190153 fastq.gz 21.5 GB
EGAF50000190154 fastq.gz 21.7 GB
EGAF50000190155 fastq.gz 20.5 GB
EGAF50000190185 fastq.gz 41.9 GB
EGAF50000190202 fastq.gz 20.5 GB
EGAF50000190203 fastq.gz 41.7 GB
EGAF50000190204 fastq.gz 44.6 GB
EGAF50000190205 fastq.gz 42.1 GB
EGAF50000190206 fastq.gz 44.4 GB
EGAF50000190207 fastq.gz 41.0 GB
EGAF50000190208 fastq.gz 45.1 GB
EGAF50000190209 fastq.gz 45.8 GB
EGAF50000190210 fastq.gz 4.0 GB
EGAF50000190211 fastq.gz 4.9 GB
EGAF50000190212 fastq.gz 5.0 GB
EGAF50000190213 fastq.gz 15.7 GB
EGAF50000190214 fastq.gz 16.0 GB
EGAF50000190215 fastq.gz 15.6 GB
EGAF50000190216 fastq.gz 15.8 GB
EGAF50000190217 fastq.gz 15.4 GB
EGAF50000190218 fastq.gz 15.6 GB
EGAF50000190219 fastq.gz 15.7 GB
EGAF50000190220 fastq.gz 15.8 GB
EGAF50000190221 fastq.gz 17.5 GB
EGAF50000190222 fastq.gz 17.7 GB
EGAF50000190223 fastq.gz 17.4 GB
EGAF50000190224 fastq.gz 17.9 GB
EGAF50000190225 fastq.gz 4.1 GB
EGAF50000190226 fastq.gz 39.4 GB
EGAF50000190265 fastq.gz 42.6 GB
EGAF50000190266 fastq.gz 44.4 GB
EGAF50000190267 fastq.gz 42.0 GB
EGAF50000190268 fastq.gz 41.0 GB
EGAF50000190269 fastq.gz 41.3 GB
EGAF50000190270 fastq.gz 45.4 GB
EGAF50000190271 fastq.gz 40.9 GB
EGAF50000190272 fastq.gz 37.9 GB
EGAF50000190273 fastq.gz 42.3 GB
EGAF50000190274 fastq.gz 17.3 GB
EGAF50000190275 fastq.gz 18.1 GB
EGAF50000190276 fastq.gz 17.3 GB
EGAF50000190277 fastq.gz 17.8 GB
EGAF50000190278 fastq.gz 46.1 GB
EGAF50000190279 fastq.gz 21.4 GB
EGAF50000190361 fastq.gz 41.3 GB
EGAF50000190383 fastq.gz 41.7 GB
EGAF50000190405 fastq.gz 43.7 GB
EGAF50000190846 fastq.gz 38.4 GB
EGAF50000190847 fastq.gz 42.9 GB
EGAF50000190848 fastq.gz 34.3 GB
EGAF50000190849 fastq.gz 37.6 GB
EGAF50000190850 fastq.gz 39.1 GB
EGAF50000190851 fastq.gz 42.3 GB
EGAF50000190852 fastq.gz 38.0 GB
EGAF50000190853 fastq.gz 52.9 GB
EGAF50000190854 fastq.gz 41.2 GB
EGAF50000190855 fastq.gz 38.7 GB
EGAF50000190856 fastq.gz 42.0 GB
EGAF50000190857 fastq.gz 40.5 GB
EGAF50000190858 fastq.gz 20.5 GB
EGAF50000190910 fastq.gz 20.9 GB
EGAF50000190911 fastq.gz 43.9 GB
EGAF50000190953 fastq.gz 21.2 GB
EGAF50000190954 fastq.gz 43.8 GB
EGAF50000190955 fastq.gz 44.8 GB
EGAF50000190967 fastq.gz 20.4 GB
EGAF50000190968 fastq.gz 41.2 GB
104 Files (3.4 TB)