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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Trascriptional profile of primary human NK cells after culture with A549 ß2m-/-

This dataset comprises the transcriptional profiles of human Natural Killer (NK) cells obtained via bulk RNA sequencing approach. The NK cells were isolated from the peripheral blood mononuclear cells (PBMCs) of six healthy donors and subsequently cultured in the presence of A549 ß2m-/- cancer cells for a duration of 9 days. After culture, RNA was extracted using the QiagenRNeasy Plus Mini Kit (250) (Qiagen, 74136) according to manufacturer's instructions and sequencing was performed on two lanes of the Illumina NovaSeq 6000 instrument resulting in 51nt-long paired-end reads.

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ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requested datasets. You can find the governing policy on Zenodo under the link: https://zenodo.org/records/12517622 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000574 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000190969 fastq.gz 377.1 MB
EGAF50000190970 fastq.gz 364.2 MB
EGAF50000190971 fastq.gz 551.9 MB
EGAF50000190972 fastq.gz 568.1 MB
EGAF50000190973 fastq.gz 342.7 MB
EGAF50000190974 fastq.gz 355.2 MB
EGAF50000190975 fastq.gz 627.3 MB
EGAF50000190976 fastq.gz 647.7 MB
EGAF50000190977 fastq.gz 609.6 MB
EGAF50000190978 fastq.gz 589.9 MB
EGAF50000190979 fastq.gz 692.2 MB
EGAF50000190980 fastq.gz 712.2 MB
EGAF50000190981 fastq.gz 757.9 MB
EGAF50000190982 fastq.gz 737.4 MB
EGAF50000190983 fastq.gz 521.1 MB
EGAF50000190984 fastq.gz 537.7 MB
EGAF50000190985 fastq.gz 489.3 MB
EGAF50000190986 fastq.gz 505.3 MB
EGAF50000190987 fastq.gz 584.1 MB
EGAF50000190988 fastq.gz 600.6 MB
EGAF50000190989 fastq.gz 639.7 MB
EGAF50000190990 fastq.gz 623.0 MB
EGAF50000190991 fastq.gz 628.6 MB
EGAF50000190992 fastq.gz 653.0 MB
EGAF50000190993 fastq.gz 589.5 MB
EGAF50000190994 fastq.gz 612.6 MB
EGAF50000190995 fastq.gz 499.0 MB
EGAF50000190996 fastq.gz 516.5 MB
EGAF50000190997 fastq.gz 549.8 MB
EGAF50000190998 fastq.gz 531.8 MB
EGAF50000190999 fastq.gz 578.2 MB
EGAF50000191000 fastq.gz 593.4 MB
EGAF50000191001 fastq.gz 635.7 MB
EGAF50000191002 fastq.gz 620.3 MB
EGAF50000191003 fastq.gz 444.8 MB
EGAF50000191004 fastq.gz 477.4 MB
EGAF50000191005 fastq.gz 447.6 MB
EGAF50000191006 fastq.gz 417.3 MB
EGAF50000191007 fastq.gz 607.7 MB
EGAF50000191008 fastq.gz 629.5 MB
EGAF50000191009 fastq.gz 653.8 MB
EGAF50000191010 fastq.gz 676.7 MB
EGAF50000191011 fastq.gz 687.2 MB
EGAF50000191012 fastq.gz 711.3 MB
EGAF50000191013 fastq.gz 663.5 MB
EGAF50000191014 fastq.gz 640.4 MB
EGAF50000191015 fastq.gz 588.7 MB
EGAF50000191016 fastq.gz 605.3 MB
48 Files (27.7 GB)