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Dataset for early breast cancer samples

This dataset contains WGS data for 27 tumor, control and patient derived culture samples of patients with breast cancer. Sequencing was performed on Illumina NovaSeq 6000 and HiSeq X using TruSeq Nano DNA Kit. The sequencing was always paired

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000605 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000199840 fastq.gz 41.2 GB
EGAF50000199841 fastq.gz 37.8 GB
EGAF50000199842 fastq.gz 35.5 GB
EGAF50000199843 fastq.gz 39.1 GB
EGAF50000199844 fastq.gz 36.2 GB
EGAF50000199845 fastq.gz 39.0 GB
EGAF50000199846 fastq.gz 8.3 GB
EGAF50000199847 fastq.gz 9.4 GB
EGAF50000199848 fastq.gz 9.9 GB
EGAF50000199849 fastq.gz 8.8 GB
EGAF50000199850 fastq.gz 9.4 GB
EGAF50000199851 fastq.gz 9.9 GB
EGAF50000199852 fastq.gz 9.3 GB
EGAF50000199853 fastq.gz 9.6 GB
EGAF50000199854 fastq.gz 36.8 GB
EGAF50000199855 fastq.gz 39.4 GB
EGAF50000199856 fastq.gz 36.0 GB
EGAF50000199857 fastq.gz 39.0 GB
EGAF50000199858 fastq.gz 38.2 GB
EGAF50000199859 fastq.gz 42.7 GB
EGAF50000199860 fastq.gz 37.7 GB
EGAF50000199861 fastq.gz 42.7 GB
EGAF50000199862 fastq.gz 18.8 GB
EGAF50000199863 fastq.gz 19.9 GB
EGAF50000199864 fastq.gz 18.7 GB
EGAF50000199865 fastq.gz 19.9 GB
EGAF50000199866 fastq.gz 19.8 GB
EGAF50000199867 fastq.gz 18.7 GB
EGAF50000199868 fastq.gz 18.6 GB
EGAF50000199869 fastq.gz 19.6 GB
EGAF50000199870 fastq.gz 69.7 GB
EGAF50000199871 fastq.gz 71.9 GB
EGAF50000199872 fastq.gz 65.8 GB
EGAF50000199873 fastq.gz 68.8 GB
EGAF50000199874 fastq.gz 18.8 GB
EGAF50000199875 fastq.gz 19.6 GB
EGAF50000199876 fastq.gz 19.5 GB
EGAF50000199877 fastq.gz 18.7 GB
EGAF50000199878 fastq.gz 18.8 GB
EGAF50000199879 fastq.gz 19.6 GB
EGAF50000199880 fastq.gz 18.6 GB
EGAF50000199881 fastq.gz 19.3 GB
EGAF50000199882 fastq.gz 15.3 GB
EGAF50000199883 fastq.gz 15.9 GB
EGAF50000199884 fastq.gz 15.5 GB
EGAF50000199885 fastq.gz 16.2 GB
EGAF50000199886 fastq.gz 15.4 GB
EGAF50000199887 fastq.gz 16.0 GB
EGAF50000199888 fastq.gz 15.3 GB
EGAF50000199889 fastq.gz 15.8 GB
EGAF50000199890 fastq.gz 67.2 GB
EGAF50000199891 fastq.gz 69.1 GB
EGAF50000199892 fastq.gz 41.1 GB
EGAF50000199893 fastq.gz 44.5 GB
EGAF50000199894 fastq.gz 37.7 GB
EGAF50000199895 fastq.gz 41.2 GB
EGAF50000199896 fastq.gz 41.1 GB
EGAF50000199897 fastq.gz 44.6 GB
EGAF50000199898 fastq.gz 39.8 GB
EGAF50000199899 fastq.gz 44.2 GB
EGAF50000199900 fastq.gz 39.2 GB
EGAF50000199901 fastq.gz 41.1 GB
EGAF50000199902 fastq.gz 41.9 GB
EGAF50000199903 fastq.gz 39.1 GB
EGAF50000199904 fastq.gz 38.9 GB
EGAF50000199905 fastq.gz 41.3 GB
EGAF50000199906 fastq.gz 37.2 GB
EGAF50000199907 fastq.gz 40.5 GB
EGAF50000199908 fastq.gz 38.0 GB
EGAF50000199909 fastq.gz 41.5 GB
EGAF50000199910 fastq.gz 20.6 GB
EGAF50000199911 fastq.gz 19.8 GB
EGAF50000199912 fastq.gz 41.0 GB
EGAF50000199913 fastq.gz 44.8 GB
EGAF50000199914 fastq.gz 37.5 GB
EGAF50000199915 fastq.gz 42.2 GB
EGAF50000199916 fastq.gz 36.6 GB
EGAF50000199917 fastq.gz 39.5 GB
EGAF50000199918 fastq.gz 36.5 GB
EGAF50000199919 fastq.gz 39.2 GB
EGAF50000199920 fastq.gz 36.0 GB
EGAF50000199921 fastq.gz 39.4 GB
EGAF50000199922 fastq.gz 39.4 GB
EGAF50000199923 fastq.gz 43.2 GB
EGAF50000199924 fastq.gz 36.6 GB
EGAF50000199925 fastq.gz 39.5 GB
EGAF50000199926 fastq.gz 37.0 GB
EGAF50000199927 fastq.gz 39.4 GB
EGAF50000199928 fastq.gz 33.2 GB
EGAF50000199929 fastq.gz 36.6 GB
EGAF50000199930 fastq.gz 34.4 GB
EGAF50000199931 fastq.gz 37.3 GB
EGAF50000199932 fastq.gz 37.7 GB
EGAF50000199933 fastq.gz 41.4 GB
EGAF50000199934 fastq.gz 39.8 GB
EGAF50000199935 fastq.gz 36.1 GB
EGAF50000199936 fastq.gz 38.5 GB
EGAF50000199937 fastq.gz 36.3 GB
EGAF50000199938 fastq.gz 36.2 GB
EGAF50000199939 fastq.gz 38.5 GB
EGAF50000199940 fastq.gz 37.7 GB
EGAF50000199941 fastq.gz 33.8 GB
EGAF50000199942 fastq.gz 36.9 GB
EGAF50000199943 fastq.gz 39.8 GB
EGAF50000199944 fastq.gz 39.0 GB
EGAF50000199945 fastq.gz 41.2 GB
EGAF50000199946 fastq.gz 39.4 GB
EGAF50000199947 fastq.gz 42.7 GB
EGAF50000199948 fastq.gz 38.6 GB
EGAF50000199949 fastq.gz 42.7 GB
EGAF50000199950 fastq.gz 13.2 GB
EGAF50000199951 fastq.gz 13.7 GB
EGAF50000199952 fastq.gz 13.0 GB
EGAF50000199953 fastq.gz 13.6 GB
EGAF50000199954 fastq.gz 13.1 GB
EGAF50000199955 fastq.gz 13.7 GB
EGAF50000199956 fastq.gz 13.2 GB
EGAF50000199957 fastq.gz 13.8 GB
EGAF50000199958 fastq.gz 19.6 GB
EGAF50000199959 fastq.gz 20.4 GB
EGAF50000199960 fastq.gz 19.3 GB
EGAF50000199961 fastq.gz 20.1 GB
EGAF50000199962 fastq.gz 19.6 GB
EGAF50000199963 fastq.gz 20.4 GB
124 Files (3.9 TB)