About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNA-Seq of human longitudinal whole blood samples from PCR-positive and PCR-negative adults following controlled inoculation with Influenza A H3N2 virus.

Understanding of the transcriptomic profile of individuals in early influenza infection is limited. To investigate this, longitudinal whole-blood samples (n=178) were taken from adult participants following controlled inoculation with Influenza A H3N2 virus (sampling at baseline (0) and days 1, 2, 3, 7, 10 and 14 post-challenge). Most participants became influenza PCR-positive; a minority remained PCR-negative. Total RNA was extracted from PAXgene tubes before undergoing globin and rRNA depletion. DNA libraries were constructed using the NEBNext® Ultra™ II Directional RNA Library Prep Kit for Illumina. All samples were then sequenced using Illumina NovaSeq 6000.

Request Access

Data is available upon reasonable request to the data access committee (Prof. Christopher Chiu, and Dr Myrsini Kaforou, Imperial College London).

Data is available upon reasonable request to the data access committee (Prof. Christopher Chiu, and Dr Myrsini Kaforou, Imperial College London). Investigators will be asked to provide a short summary of how they wish to use the data in their research prior to granting access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000679 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000227227 fastq.gz 1.5 GB Report
EGAF50000227228 fastq.gz 1.5 GB Report
EGAF50000227229 fastq.gz 1.3 GB Report
EGAF50000227230 fastq.gz 1.3 GB Report
EGAF50000227231 fastq.gz 1.4 GB Report
EGAF50000227232 fastq.gz 1.3 GB Report
EGAF50000227233 fastq.gz 1.4 GB Report
EGAF50000227234 fastq.gz 1.3 GB Report
EGAF50000227235 fastq.gz 1.4 GB Report
EGAF50000227236 fastq.gz 1.5 GB Report
EGAF50000227237 fastq.gz 1.4 GB Report
EGAF50000227238 fastq.gz 1.4 GB Report
EGAF50000227239 fastq.gz 1.2 GB Report
EGAF50000227240 fastq.gz 1.3 GB Report
EGAF50000227241 fastq.gz 1.5 GB Report
EGAF50000227242 fastq.gz 1.5 GB Report
EGAF50000227243 fastq.gz 1.3 GB Report
EGAF50000227244 fastq.gz 1.4 GB Report
EGAF50000227245 fastq.gz 1.4 GB Report
EGAF50000227246 fastq.gz 1.6 GB Report
EGAF50000227247 fastq.gz 1.6 GB Report
EGAF50000227248 fastq.gz 1.3 GB Report
EGAF50000227249 fastq.gz 1.3 GB Report
EGAF50000227250 fastq.gz 1.4 GB Report
EGAF50000227251 fastq.gz 1.4 GB Report
EGAF50000227252 fastq.gz 1.0 GB Report
EGAF50000227253 fastq.gz 1.4 GB Report
EGAF50000227254 fastq.gz 1.4 GB Report
EGAF50000227255 fastq.gz 1.3 GB Report
EGAF50000227256 fastq.gz 1.4 GB Report
EGAF50000227257 fastq.gz 1.3 GB Report
EGAF50000227258 fastq.gz 1.4 GB Report
EGAF50000227259 fastq.gz 1.5 GB Report
EGAF50000227260 fastq.gz 1.2 GB Report
EGAF50000227261 fastq.gz 1.3 GB Report
EGAF50000227262 fastq.gz 1.2 GB Report
EGAF50000227263 fastq.gz 1.5 GB Report
EGAF50000227264 fastq.gz 1.4 GB Report
EGAF50000227265 fastq.gz 1.5 GB Report
EGAF50000227266 fastq.gz 1.3 GB Report
EGAF50000227267 fastq.gz 1.3 GB Report
EGAF50000227268 fastq.gz 1.4 GB Report
EGAF50000227269 fastq.gz 1.3 GB Report
EGAF50000227270 fastq.gz 1.4 GB Report
EGAF50000227271 fastq.gz 1.2 GB Report
EGAF50000227272 fastq.gz 1.2 GB Report
EGAF50000227273 fastq.gz 1.3 GB Report
EGAF50000227274 fastq.gz 1.3 GB Report
EGAF50000227275 fastq.gz 1.4 GB Report
EGAF50000227276 fastq.gz 1.4 GB Report
EGAF50000227277 fastq.gz 1.4 GB Report
EGAF50000227278 fastq.gz 1.3 GB Report
EGAF50000227279 fastq.gz 1.3 GB Report
EGAF50000227280 fastq.gz 1.5 GB Report
EGAF50000227281 fastq.gz 1.5 GB Report
EGAF50000227282 fastq.gz 1.5 GB Report
EGAF50000227283 fastq.gz 1.5 GB Report
EGAF50000227284 fastq.gz 1.4 GB Report
EGAF50000227285 fastq.gz 1.5 GB Report
EGAF50000227286 fastq.gz 1.3 GB Report
EGAF50000227287 fastq.gz 1.3 GB Report
EGAF50000227288 fastq.gz 1.4 GB Report
EGAF50000227289 fastq.gz 1.4 GB Report
EGAF50000227290 fastq.gz 1.4 GB Report
EGAF50000227291 fastq.gz 1.5 GB Report
EGAF50000227292 fastq.gz 1.5 GB Report
EGAF50000227293 fastq.gz 1.5 GB Report
EGAF50000227294 fastq.gz 1.5 GB Report
EGAF50000227295 fastq.gz 1.4 GB Report
EGAF50000227296 fastq.gz 1.5 GB Report
EGAF50000227297 fastq.gz 1.4 GB Report
EGAF50000227298 fastq.gz 1.4 GB Report
EGAF50000227299 fastq.gz 1.4 GB Report
EGAF50000227300 fastq.gz 1.4 GB Report
EGAF50000227301 fastq.gz 1.4 GB Report
EGAF50000227302 fastq.gz 1.4 GB Report
EGAF50000227303 fastq.gz 1.3 GB Report
EGAF50000227304 fastq.gz 1.3 GB Report
EGAF50000227305 fastq.gz 1.5 GB Report
EGAF50000227306 fastq.gz 1.6 GB Report
EGAF50000227307 fastq.gz 1.6 GB Report
EGAF50000227308 fastq.gz 1.7 GB Report
EGAF50000227309 fastq.gz 1.3 GB Report
EGAF50000227310 fastq.gz 1.4 GB Report
EGAF50000227311 fastq.gz 1.3 GB Report
EGAF50000227312 fastq.gz 1.3 GB Report
EGAF50000227313 fastq.gz 1.3 GB Report
EGAF50000227314 fastq.gz 1.3 GB Report
EGAF50000227315 fastq.gz 1.4 GB Report
EGAF50000227316 fastq.gz 1.4 GB Report
EGAF50000227317 fastq.gz 1.3 GB Report
EGAF50000227318 fastq.gz 1.4 GB Report
EGAF50000227319 fastq.gz 1.4 GB Report
EGAF50000227320 fastq.gz 1.3 GB Report
EGAF50000227321 fastq.gz 1.4 GB Report
EGAF50000227322 fastq.gz 1.5 GB Report
EGAF50000227323 fastq.gz 1.5 GB Report
EGAF50000227324 fastq.gz 1.5 GB Report
EGAF50000227325 fastq.gz 1.4 GB Report
EGAF50000227326 fastq.gz 1.4 GB Report
EGAF50000227327 fastq.gz 1.4 GB Report
EGAF50000227328 fastq.gz 1.4 GB Report
EGAF50000227329 fastq.gz 1.4 GB Report
EGAF50000227330 fastq.gz 1.4 GB Report
EGAF50000227331 fastq.gz 1.4 GB Report
EGAF50000227332 fastq.gz 1.4 GB Report
EGAF50000227333 fastq.gz 1.2 GB Report
EGAF50000227334 fastq.gz 1.5 GB Report
EGAF50000227335 fastq.gz 1.5 GB Report
EGAF50000227336 fastq.gz 1.4 GB Report
EGAF50000227337 fastq.gz 1.4 GB Report
EGAF50000227338 fastq.gz 1.3 GB Report
EGAF50000227339 fastq.gz 1.6 GB Report
EGAF50000227340 fastq.gz 1.4 GB Report
EGAF50000227341 fastq.gz 1.4 GB Report
EGAF50000227342 fastq.gz 1.4 GB Report
EGAF50000227343 fastq.gz 1.3 GB Report
EGAF50000227344 fastq.gz 1.4 GB Report
EGAF50000227345 fastq.gz 1.4 GB Report
EGAF50000227346 fastq.gz 1.4 GB Report
EGAF50000227347 fastq.gz 1.4 GB Report
EGAF50000227348 fastq.gz 1.5 GB Report
EGAF50000227349 fastq.gz 1.5 GB Report
EGAF50000227350 fastq.gz 1.2 GB Report
EGAF50000227351 fastq.gz 1.3 GB Report
EGAF50000227352 fastq.gz 1.4 GB Report
EGAF50000227353 fastq.gz 1.5 GB
EGAF50000227354 fastq.gz 1.3 GB Report
EGAF50000227355 fastq.gz 1.3 GB Report
EGAF50000227356 fastq.gz 1.3 GB Report
EGAF50000227357 fastq.gz 1.4 GB Report
EGAF50000227358 fastq.gz 1.5 GB Report
EGAF50000227359 fastq.gz 1.3 GB Report
EGAF50000227360 fastq.gz 1.3 GB Report
EGAF50000227361 fastq.gz 1.6 GB Report
EGAF50000227362 fastq.gz 1.3 GB Report
EGAF50000227363 fastq.gz 1.3 GB Report
EGAF50000227364 fastq.gz 1.6 GB Report
EGAF50000227365 fastq.gz 1.6 GB Report
EGAF50000227366 fastq.gz 1.5 GB Report
EGAF50000227367 fastq.gz 1.5 GB Report
EGAF50000227368 fastq.gz 1.3 GB Report
EGAF50000227369 fastq.gz 1.3 GB Report
EGAF50000227370 fastq.gz 1.3 GB Report
EGAF50000227371 fastq.gz 1.4 GB Report
EGAF50000227372 fastq.gz 1.3 GB Report
EGAF50000227373 fastq.gz 1.3 GB Report
EGAF50000227374 fastq.gz 1.4 GB Report
EGAF50000227375 fastq.gz 1.4 GB Report
EGAF50000227376 fastq.gz 1.3 GB Report
EGAF50000227377 fastq.gz 1.3 GB Report
EGAF50000227378 fastq.gz 1.3 GB Report
EGAF50000227379 fastq.gz 480.3 MB
EGAF50000227380 fastq.gz 1.3 GB Report
EGAF50000227381 fastq.gz 1.1 GB Report
EGAF50000227382 fastq.gz 1.4 GB Report
EGAF50000227383 fastq.gz 1.3 GB Report
EGAF50000227384 fastq.gz 1.4 GB Report
EGAF50000227385 fastq.gz 1.3 GB Report
EGAF50000227386 fastq.gz 1.3 GB Report
EGAF50000227387 fastq.gz 1.4 GB Report
EGAF50000227388 fastq.gz 1.4 GB Report
EGAF50000227389 fastq.gz 1.3 GB Report
EGAF50000227390 fastq.gz 1.4 GB Report
EGAF50000227391 fastq.gz 1.4 GB Report
EGAF50000227392 fastq.gz 1.3 GB Report
EGAF50000227393 fastq.gz 1.3 GB Report
EGAF50000227394 fastq.gz 1.3 GB Report
EGAF50000227395 fastq.gz 1.5 GB Report
EGAF50000227396 fastq.gz 1.4 GB Report
EGAF50000227397 fastq.gz 1.5 GB Report
EGAF50000227398 fastq.gz 1.3 GB Report
EGAF50000227399 fastq.gz 1.4 GB Report
EGAF50000227400 fastq.gz 1.6 GB Report
EGAF50000227401 fastq.gz 1.4 GB Report
EGAF50000227402 fastq.gz 1.5 GB Report
EGAF50000227403 fastq.gz 1.4 GB Report
EGAF50000227404 fastq.gz 1.3 GB Report
EGAF50000227405 fastq.gz 1.4 GB Report
EGAF50000227406 fastq.gz 1.2 GB Report
EGAF50000227407 fastq.gz 1.2 GB Report
EGAF50000227408 fastq.gz 1.3 GB Report
EGAF50000227409 fastq.gz 1.3 GB Report
EGAF50000227410 fastq.gz 1.2 GB Report
EGAF50000227411 fastq.gz 1.2 GB Report
EGAF50000227412 fastq.gz 1.4 GB Report
EGAF50000227413 fastq.gz 1.2 GB Report
EGAF50000227414 fastq.gz 1.2 GB Report
EGAF50000227415 fastq.gz 1.4 GB Report
EGAF50000227416 fastq.gz 1.5 GB Report
EGAF50000227417 fastq.gz 1.3 GB Report
EGAF50000227418 fastq.gz 1.4 GB Report
EGAF50000227419 fastq.gz 1.3 GB Report
EGAF50000227420 fastq.gz 1.3 GB Report
EGAF50000227421 fastq.gz 1.3 GB Report
EGAF50000227422 fastq.gz 1.4 GB Report
EGAF50000227423 fastq.gz 1.3 GB Report
EGAF50000227424 fastq.gz 1.3 GB Report
EGAF50000227425 fastq.gz 1.4 GB Report
EGAF50000227426 fastq.gz 1.4 GB Report
EGAF50000227427 fastq.gz 1.5 GB Report
EGAF50000227428 fastq.gz 1.5 GB Report
EGAF50000227429 fastq.gz 1.5 GB Report
EGAF50000227430 fastq.gz 1.6 GB Report
EGAF50000227431 fastq.gz 1.5 GB Report
EGAF50000227432 fastq.gz 1.5 GB Report
EGAF50000227433 fastq.gz 1.3 GB Report
EGAF50000227434 fastq.gz 1.3 GB Report
EGAF50000227435 fastq.gz 1.3 GB Report
EGAF50000227436 fastq.gz 1.3 GB Report
EGAF50000227437 fastq.gz 1.5 GB Report
EGAF50000227438 fastq.gz 1.5 GB Report
EGAF50000227439 fastq.gz 1.6 GB Report
EGAF50000227440 fastq.gz 1.4 GB Report
EGAF50000227441 fastq.gz 1.4 GB Report
EGAF50000227442 fastq.gz 1.4 GB Report
EGAF50000227443 fastq.gz 1.4 GB Report
EGAF50000227444 fastq.gz 1.7 GB Report
EGAF50000227445 fastq.gz 1.4 GB Report
EGAF50000227446 fastq.gz 1.4 GB Report
EGAF50000227447 fastq.gz 1.4 GB Report
EGAF50000227448 fastq.gz 1.4 GB Report
EGAF50000227449 fastq.gz 1.4 GB Report
EGAF50000227450 fastq.gz 1.4 GB Report
EGAF50000227451 fastq.gz 1.3 GB Report
EGAF50000227452 fastq.gz 1.5 GB Report
EGAF50000227453 fastq.gz 1.6 GB Report
EGAF50000227454 fastq.gz 1.5 GB Report
EGAF50000227455 fastq.gz 1.5 GB Report
EGAF50000227456 fastq.gz 1.4 GB Report
EGAF50000227457 fastq.gz 1.4 GB Report
EGAF50000227458 fastq.gz 1.3 GB Report
EGAF50000227459 fastq.gz 1.4 GB Report
EGAF50000227460 fastq.gz 1.4 GB Report
EGAF50000227461 fastq.gz 1.6 GB Report
EGAF50000227462 fastq.gz 1.5 GB Report
EGAF50000227463 fastq.gz 1.3 GB Report
EGAF50000227464 fastq.gz 1.4 GB Report
EGAF50000227465 fastq.gz 1.4 GB Report
EGAF50000227466 fastq.gz 1.5 GB Report
EGAF50000227467 fastq.gz 1.5 GB Report
EGAF50000227468 fastq.gz 1.5 GB Report
EGAF50000227469 fastq.gz 1.4 GB Report
EGAF50000227470 fastq.gz 1.5 GB Report
EGAF50000227471 fastq.gz 1.3 GB Report
EGAF50000227472 fastq.gz 1.3 GB Report
EGAF50000227473 fastq.gz 1.2 GB Report
EGAF50000227474 fastq.gz 1.3 GB Report
EGAF50000227475 fastq.gz 1.3 GB Report
EGAF50000227476 fastq.gz 1.7 GB Report
EGAF50000227477 fastq.gz 1.6 GB Report
EGAF50000227478 fastq.gz 1.5 GB Report
EGAF50000227479 fastq.gz 1.4 GB Report
EGAF50000227480 fastq.gz 1.4 GB Report
EGAF50000227481 fastq.gz 1.5 GB Report
EGAF50000227482 fastq.gz 1.5 GB Report
EGAF50000227483 fastq.gz 1.4 GB Report
EGAF50000227484 fastq.gz 1.4 GB Report
EGAF50000227485 fastq.gz 1.5 GB Report
EGAF50000227486 fastq.gz 1.5 GB Report
EGAF50000227487 fastq.gz 1.5 GB Report
EGAF50000227488 fastq.gz 1.3 GB Report
EGAF50000227489 fastq.gz 1.4 GB Report
EGAF50000227490 fastq.gz 1.4 GB Report
EGAF50000227491 fastq.gz 1.5 GB Report
EGAF50000227492 fastq.gz 1.3 GB Report
EGAF50000227493 fastq.gz 1.3 GB Report
EGAF50000227494 fastq.gz 1.4 GB Report
EGAF50000227495 fastq.gz 1.5 GB Report
EGAF50000227496 fastq.gz 1.4 GB Report
EGAF50000227497 fastq.gz 1.4 GB Report
EGAF50000227498 fastq.gz 1.3 GB Report
EGAF50000227499 fastq.gz 1.4 GB Report
EGAF50000227500 fastq.gz 1.3 GB Report
EGAF50000227501 fastq.gz 1.4 GB Report
EGAF50000227502 fastq.gz 1.4 GB Report
EGAF50000227503 fastq.gz 1.5 GB Report
EGAF50000227504 fastq.gz 1.4 GB Report
EGAF50000227505 fastq.gz 1.5 GB Report
EGAF50000227506 fastq.gz 1.6 GB Report
EGAF50000227507 fastq.gz 1.6 GB Report
EGAF50000227508 fastq.gz 1.5 GB Report
EGAF50000227509 fastq.gz 1.4 GB Report
EGAF50000227510 fastq.gz 1.4 GB Report
EGAF50000227511 fastq.gz 1.5 GB Report
EGAF50000227512 fastq.gz 1.5 GB Report
EGAF50000227513 fastq.gz 1.3 GB Report
EGAF50000227514 fastq.gz 1.4 GB Report
EGAF50000227515 fastq.gz 1.2 GB Report
EGAF50000227516 fastq.gz 1.2 GB Report
EGAF50000227517 fastq.gz 1.3 GB Report
EGAF50000227518 fastq.gz 1.5 GB Report
EGAF50000227519 fastq.gz 1.4 GB Report
EGAF50000227520 fastq.gz 1.5 GB Report
EGAF50000227521 fastq.gz 1.4 GB Report
EGAF50000227522 fastq.gz 1.4 GB Report
EGAF50000227523 fastq.gz 1.5 GB Report
EGAF50000227524 fastq.gz 1.3 GB Report
EGAF50000227525 fastq.gz 1.3 GB Report
EGAF50000227526 fastq.gz 1.7 GB Report
EGAF50000227527 fastq.gz 1.4 GB Report
EGAF50000227528 fastq.gz 1.5 GB Report
EGAF50000227529 fastq.gz 1.5 GB Report
EGAF50000227530 fastq.gz 1.4 GB Report
EGAF50000227531 fastq.gz 1.4 GB Report
EGAF50000227532 fastq.gz 1.4 GB Report
EGAF50000227533 fastq.gz 1.4 GB Report
EGAF50000227534 fastq.gz 1.4 GB Report
EGAF50000227535 fastq.gz 1.5 GB Report
EGAF50000227536 fastq.gz 1.5 GB Report
EGAF50000227537 fastq.gz 1.5 GB Report
EGAF50000227538 fastq.gz 1.5 GB Report
EGAF50000227539 fastq.gz 1.6 GB Report
EGAF50000227540 fastq.gz 1.2 GB Report
EGAF50000227541 fastq.gz 1.2 GB Report
EGAF50000227542 fastq.gz 1.3 GB Report
EGAF50000227543 fastq.gz 1.3 GB Report
EGAF50000227544 fastq.gz 1.4 GB Report
EGAF50000227545 fastq.gz 1.4 GB Report
EGAF50000227546 fastq.gz 1.4 GB Report
EGAF50000227547 fastq.gz 1.5 GB Report
EGAF50000227548 fastq.gz 1.4 GB Report
EGAF50000227549 fastq.gz 1.3 GB Report
EGAF50000227550 fastq.gz 1.3 GB Report
EGAF50000227551 fastq.gz 1.3 GB Report
EGAF50000227552 fastq.gz 1.3 GB Report
EGAF50000227553 fastq.gz 1.3 GB Report
EGAF50000227554 fastq.gz 1.4 GB Report
EGAF50000227555 fastq.gz 1.5 GB Report
EGAF50000227556 fastq.gz 1.5 GB Report
EGAF50000227557 fastq.gz 1.2 GB Report
EGAF50000227558 fastq.gz 1.3 GB Report
EGAF50000227559 fastq.gz 1.4 GB Report
EGAF50000227560 fastq.gz 1.4 GB Report
EGAF50000227561 fastq.gz 1.3 GB Report
EGAF50000227562 fastq.gz 1.3 GB Report
EGAF50000227563 fastq.gz 1.3 GB Report
EGAF50000227564 fastq.gz 1.4 GB Report
EGAF50000227565 fastq.gz 1.2 GB Report
EGAF50000227566 fastq.gz 1.4 GB Report
EGAF50000227567 fastq.gz 1.3 GB Report
EGAF50000227568 fastq.gz 1.3 GB Report
EGAF50000227569 fastq.gz 1.4 GB Report
EGAF50000227570 fastq.gz 1.5 GB Report
EGAF50000227571 fastq.gz 1.5 GB Report
EGAF50000227572 fastq.gz 1.5 GB Report
EGAF50000227573 fastq.gz 1.4 GB Report
EGAF50000227574 fastq.gz 1.3 GB Report
EGAF50000227575 fastq.gz 1.5 GB Report
EGAF50000227576 fastq.gz 1.2 GB Report
EGAF50000227577 fastq.gz 1.3 GB Report
EGAF50000227578 fastq.gz 1.2 GB Report
EGAF50000227579 fastq.gz 1.3 GB Report
EGAF50000227580 fastq.gz 1.3 GB Report
EGAF50000227581 fastq.gz 1.4 GB Report
EGAF50000227582 fastq.gz 1.5 GB Report
356 Files (494.3 GB)