Need Help?

sWGS for 92 samples of mCRC

Shallow Whole Genome Sequencing of 92 mCRC samples. Chromosomal copy number alterations analysis was performed with the samples to predict response to bevacizumab.

Request Access

Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000711 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000241271 bai 6.0 MB
EGAF50000241272 bam 308.8 MB
EGAF50000241273 bai 6.0 MB
EGAF50000241274 bam 314.6 MB
EGAF50000241275 bai 6.0 MB
EGAF50000241276 bam 220.2 MB
EGAF50000241277 bai 5.9 MB
EGAF50000241278 bam 213.7 MB
EGAF50000241279 bai 6.0 MB
EGAF50000241280 bam 327.6 MB
EGAF50000241281 bai 6.0 MB
EGAF50000241282 bam 310.2 MB
EGAF50000241283 bai 6.1 MB
EGAF50000241284 bam 405.2 MB
EGAF50000241285 bai 6.1 MB
EGAF50000241286 bam 390.7 MB
EGAF50000241287 bai 6.0 MB
EGAF50000241288 bam 235.0 MB
EGAF50000241289 bai 6.0 MB
EGAF50000241290 bam 240.7 MB
EGAF50000241291 bai 6.0 MB
EGAF50000241292 bam 341.7 MB
EGAF50000241293 bai 6.0 MB
EGAF50000241294 bam 326.3 MB
EGAF50000241295 bai 6.1 MB
EGAF50000241296 bam 415.4 MB
EGAF50000241297 bai 6.1 MB
EGAF50000241298 bam 405.4 MB
EGAF50000241299 bai 6.0 MB
EGAF50000241300 bam 282.3 MB
EGAF50000241301 bai 6.0 MB
EGAF50000241302 bam 275.6 MB
EGAF50000241303 bai 6.0 MB
EGAF50000241304 bam 327.7 MB
EGAF50000241305 bai 6.0 MB
EGAF50000241306 bam 315.3 MB
EGAF50000241307 bai 5.9 MB
EGAF50000241308 bam 167.5 MB
EGAF50000241309 bai 5.9 MB
EGAF50000241310 bam 161.1 MB
EGAF50000241311 bai 6.0 MB
EGAF50000241312 bam 244.4 MB
EGAF50000241313 bai 6.0 MB
EGAF50000241314 bam 245.8 MB
EGAF50000241315 bai 6.0 MB
EGAF50000241316 bam 300.1 MB
EGAF50000241317 bai 6.0 MB
EGAF50000241318 bam 297.2 MB
EGAF50000241319 bai 6.0 MB
EGAF50000241320 bam 255.6 MB
EGAF50000241321 bai 6.0 MB
EGAF50000241322 bam 252.3 MB
EGAF50000241323 bai 6.0 MB
EGAF50000241324 bam 246.3 MB
EGAF50000241325 bai 6.0 MB
EGAF50000241326 bam 245.0 MB
EGAF50000241327 bai 6.0 MB
EGAF50000241328 bam 291.0 MB
EGAF50000241329 bai 6.0 MB
EGAF50000241330 bam 293.3 MB
EGAF50000241331 bai 6.0 MB
EGAF50000241332 bai 6.0 MB
EGAF50000241333 bam 230.8 MB
EGAF50000241334 bam 233.0 MB
EGAF50000241335 bai 6.0 MB
EGAF50000241336 bam 235.9 MB
EGAF50000241337 bai 5.9 MB
EGAF50000241338 bam 227.0 MB
EGAF50000241339 bai 6.0 MB
EGAF50000241340 bam 296.6 MB
EGAF50000241341 bai 6.0 MB
EGAF50000241342 bam 284.1 MB
EGAF50000241343 bai 6.0 MB
EGAF50000241344 bam 262.1 MB
EGAF50000241345 bai 6.0 MB
EGAF50000241346 bam 248.6 MB
EGAF50000241347 bai 5.9 MB
EGAF50000241348 bam 203.6 MB
EGAF50000241349 bai 5.9 MB
EGAF50000241350 bam 207.0 MB
EGAF50000241351 bai 6.1 MB
EGAF50000241352 bam 378.5 MB
EGAF50000241353 bai 6.1 MB
EGAF50000241354 bam 364.9 MB
EGAF50000241355 bai 6.0 MB
EGAF50000241356 bam 305.7 MB
EGAF50000241357 bai 6.0 MB
EGAF50000241358 bam 296.9 MB
EGAF50000241359 bai 5.9 MB
EGAF50000241360 bai 5.9 MB
EGAF50000241361 bam 210.1 MB
EGAF50000241362 bam 208.5 MB
EGAF50000241363 bai 6.0 MB
EGAF50000241364 bam 274.6 MB
EGAF50000241365 bai 6.0 MB
EGAF50000241366 bam 268.5 MB
EGAF50000241367 bai 6.0 MB
EGAF50000241368 bam 257.0 MB
EGAF50000241369 bai 6.0 MB
EGAF50000241370 bam 247.5 MB
EGAF50000241371 bai 6.1 MB
EGAF50000241372 bai 6.1 MB
EGAF50000241373 bam 363.7 MB
EGAF50000241374 bam 369.3 MB
EGAF50000241375 bai 5.9 MB
EGAF50000241376 bam 211.7 MB
EGAF50000241377 bai 5.9 MB
EGAF50000241378 bam 212.9 MB
EGAF50000241379 bai 6.0 MB
EGAF50000241380 bam 253.1 MB
EGAF50000241381 bai 6.0 MB
EGAF50000241382 bam 242.3 MB
EGAF50000241383 bai 6.0 MB
EGAF50000241384 bam 270.4 MB
EGAF50000241385 bai 5.9 MB
EGAF50000241386 bam 259.9 MB
EGAF50000241387 bai 6.0 MB
EGAF50000241388 bam 237.9 MB
EGAF50000241389 bai 6.0 MB
EGAF50000241390 bam 240.0 MB
EGAF50000241391 bai 6.0 MB
EGAF50000241392 bam 342.2 MB
EGAF50000241393 bai 6.0 MB
EGAF50000241394 bam 333.0 MB
EGAF50000241395 bai 6.0 MB
EGAF50000241396 bai 6.0 MB
EGAF50000241397 bam 314.7 MB
EGAF50000241398 bam 318.2 MB
EGAF50000241399 bai 6.0 MB
EGAF50000241400 bam 268.9 MB
EGAF50000241401 bai 6.0 MB
EGAF50000241402 bam 262.6 MB
EGAF50000241403 bai 6.0 MB
EGAF50000241404 bam 318.0 MB
EGAF50000241405 bai 6.0 MB
EGAF50000241406 bam 306.2 MB
EGAF50000241407 bai 6.0 MB
EGAF50000241408 bai 6.0 MB
EGAF50000241409 bam 350.1 MB
EGAF50000241410 bam 336.7 MB
EGAF50000241411 bai 6.0 MB
EGAF50000241412 bam 295.8 MB
EGAF50000241413 bai 6.0 MB
EGAF50000241414 bam 303.3 MB
EGAF50000241415 bai 5.9 MB
EGAF50000241416 bam 197.6 MB
EGAF50000241417 bai 5.9 MB
EGAF50000241418 bam 187.4 MB
EGAF50000241419 bai 6.0 MB
EGAF50000241420 bam 234.9 MB
EGAF50000241421 bai 5.9 MB
EGAF50000241422 bam 222.9 MB
EGAF50000241423 bai 6.0 MB
EGAF50000241424 bam 347.4 MB
EGAF50000241425 bai 6.0 MB
EGAF50000241426 bam 335.7 MB
EGAF50000241427 bai 6.0 MB
EGAF50000241428 bam 303.5 MB
EGAF50000241429 bai 6.0 MB
EGAF50000241430 bam 301.0 MB
EGAF50000241431 bai 6.0 MB
EGAF50000241432 bam 331.7 MB
EGAF50000241433 bai 6.0 MB
EGAF50000241434 bam 322.5 MB
EGAF50000241435 bai 5.9 MB
EGAF50000241436 bam 212.3 MB
EGAF50000241437 bai 5.9 MB
EGAF50000241438 bam 212.4 MB
EGAF50000241439 bai 6.1 MB
EGAF50000241440 bam 344.1 MB
EGAF50000241441 bai 6.1 MB
EGAF50000241442 bam 353.7 MB
EGAF50000241443 bai 6.0 MB
EGAF50000241444 bam 300.8 MB
EGAF50000241445 bai 6.0 MB
EGAF50000241446 bam 289.4 MB
EGAF50000241447 bai 6.0 MB
EGAF50000241448 bam 250.0 MB
EGAF50000241449 bai 6.0 MB
EGAF50000241450 bam 253.7 MB
EGAF50000241451 bai 6.3 MB
EGAF50000241452 bam 598.5 MB
EGAF50000241453 bai 6.3 MB
EGAF50000241454 bam 587.7 MB
EGAF50000241455 bai 6.0 MB
EGAF50000241456 bam 332.7 MB
EGAF50000241457 bai 6.0 MB
EGAF50000241458 bam 313.7 MB
EGAF50000241459 bai 6.1 MB
EGAF50000241460 bam 370.4 MB
EGAF50000241461 bai 6.0 MB
EGAF50000241462 bam 353.0 MB
EGAF50000241463 bai 5.9 MB
EGAF50000241464 bam 180.6 MB
EGAF50000241465 bai 5.9 MB
EGAF50000241466 bam 179.2 MB
EGAF50000241467 bai 6.0 MB
EGAF50000241468 bai 6.0 MB
EGAF50000241469 bam 282.0 MB
EGAF50000241470 bam 293.7 MB
EGAF50000241471 bai 5.9 MB
EGAF50000241472 bam 179.5 MB
EGAF50000241473 bai 5.9 MB
EGAF50000241474 bam 173.7 MB
EGAF50000241475 bai 6.0 MB
EGAF50000241476 bam 241.0 MB
EGAF50000241477 bai 6.0 MB
EGAF50000241478 bam 229.3 MB
EGAF50000241479 bai 5.9 MB
EGAF50000241480 bam 168.0 MB
EGAF50000241481 bai 5.9 MB
EGAF50000241482 bam 160.6 MB
EGAF50000241483 bai 6.1 MB
EGAF50000241484 bam 355.0 MB
EGAF50000241485 bai 6.1 MB
EGAF50000241486 bam 357.0 MB
EGAF50000241487 bai 6.0 MB
EGAF50000241488 bam 323.3 MB
EGAF50000241489 bai 6.0 MB
EGAF50000241490 bam 312.0 MB
EGAF50000241491 bai 6.0 MB
EGAF50000241492 bam 289.5 MB
EGAF50000241493 bai 6.0 MB
EGAF50000241494 bam 291.3 MB
EGAF50000241495 bai 6.0 MB
EGAF50000241496 bam 241.3 MB
EGAF50000241497 bai 6.0 MB
EGAF50000241498 bam 240.4 MB
EGAF50000241499 bai 5.9 MB
EGAF50000241500 bam 204.0 MB
EGAF50000241501 bai 5.9 MB
EGAF50000241502 bam 195.7 MB
EGAF50000241503 bai 5.9 MB
EGAF50000241504 bam 192.9 MB
EGAF50000241505 bai 5.9 MB
EGAF50000241506 bam 185.4 MB
EGAF50000241507 bai 5.8 MB
EGAF50000241508 bam 129.6 MB
EGAF50000241509 bai 5.8 MB
EGAF50000241510 bam 126.8 MB
EGAF50000241511 bai 6.1 MB
EGAF50000241512 bam 414.1 MB
EGAF50000241513 bai 6.1 MB
EGAF50000241514 bam 416.6 MB
EGAF50000241515 bai 5.9 MB
EGAF50000241516 bam 218.9 MB
EGAF50000241517 bai 5.9 MB
EGAF50000241518 bam 208.7 MB
EGAF50000241519 bai 6.0 MB
EGAF50000241520 bam 328.5 MB
EGAF50000241521 bai 6.0 MB
EGAF50000241522 bam 316.0 MB
EGAF50000241523 bai 6.0 MB
EGAF50000241524 bam 274.1 MB
EGAF50000241525 bai 6.0 MB
EGAF50000241526 bam 260.2 MB
EGAF50000241527 bai 6.0 MB
EGAF50000241528 bam 297.1 MB
EGAF50000241529 bai 6.0 MB
EGAF50000241530 bai 6.1 MB
EGAF50000241531 bam 290.4 MB
EGAF50000241532 bam 456.3 MB
EGAF50000241533 bai 6.1 MB
EGAF50000241534 bam 442.8 MB
EGAF50000241535 bai 6.1 MB
EGAF50000241536 bam 379.1 MB
EGAF50000241537 bai 6.1 MB
EGAF50000241538 bam 378.0 MB
EGAF50000241539 bai 6.1 MB
EGAF50000241540 bam 329.2 MB
EGAF50000241541 bai 6.0 MB
EGAF50000241542 bam 322.3 MB
EGAF50000241543 bai 5.9 MB
EGAF50000241544 bai 5.9 MB
EGAF50000241545 bai 6.0 MB
EGAF50000241546 bam 247.8 MB
EGAF50000241547 bam 234.8 MB
EGAF50000241548 bai 6.0 MB
EGAF50000241549 bam 271.1 MB
EGAF50000241550 bai 6.4 MB
EGAF50000241551 bam 259.8 MB
EGAF50000241552 bam 799.0 MB
EGAF50000241553 bai 6.4 MB
EGAF50000241554 bam 767.7 MB
EGAF50000241555 bai 6.4 MB
EGAF50000241556 bam 706.1 MB
EGAF50000241557 bai 6.3 MB
EGAF50000241558 bam 683.7 MB
EGAF50000241559 bai 6.0 MB
EGAF50000241560 bam 310.2 MB
EGAF50000241561 bai 6.0 MB
EGAF50000241562 bam 300.7 MB
EGAF50000241563 bai 6.0 MB
EGAF50000241564 bam 310.7 MB
EGAF50000241565 bai 6.0 MB
EGAF50000241566 bam 303.1 MB
EGAF50000241567 bai 6.1 MB
EGAF50000241568 bam 337.6 MB
EGAF50000241569 bai 6.1 MB
EGAF50000241570 bam 341.3 MB
EGAF50000241571 bai 6.1 MB
EGAF50000241572 bam 355.0 MB
EGAF50000241573 bai 6.1 MB
EGAF50000241574 bam 367.6 MB
EGAF50000241575 bai 5.9 MB
EGAF50000241576 bam 141.9 MB
EGAF50000241577 bai 5.9 MB
EGAF50000241578 bam 136.2 MB
EGAF50000241579 bai 6.0 MB
EGAF50000241580 bam 323.8 MB
EGAF50000241581 bai 6.0 MB
EGAF50000241582 bam 324.0 MB
EGAF50000241583 bai 6.0 MB
EGAF50000241584 bam 260.5 MB
EGAF50000241585 bai 5.9 MB
EGAF50000241586 bam 246.8 MB
EGAF50000241587 bai 6.1 MB
EGAF50000241588 bam 352.5 MB
EGAF50000241589 bai 6.0 MB
EGAF50000241590 bam 335.6 MB
EGAF50000241591 bai 5.9 MB
EGAF50000241592 bam 217.6 MB
EGAF50000241593 bai 5.9 MB
EGAF50000241594 bam 205.3 MB
EGAF50000241595 bai 5.9 MB
EGAF50000241596 bam 171.0 MB
EGAF50000241597 bai 5.9 MB
EGAF50000241598 bam 163.5 MB
EGAF50000241599 bai 6.0 MB
EGAF50000241600 bam 260.1 MB
EGAF50000241601 bai 6.0 MB
EGAF50000241602 bam 262.3 MB
EGAF50000241603 bai 5.9 MB
EGAF50000241604 bam 240.8 MB
EGAF50000241605 bai 5.9 MB
EGAF50000241606 bam 243.4 MB
EGAF50000241607 bai 6.0 MB
EGAF50000241608 bam 228.0 MB
EGAF50000241609 bai 6.0 MB
EGAF50000241610 bam 228.5 MB
EGAF50000241611 bai 6.1 MB
EGAF50000241612 bam 375.0 MB
EGAF50000241613 bai 6.0 MB
EGAF50000241614 bam 361.1 MB
EGAF50000241615 bai 5.9 MB
EGAF50000241616 bam 162.8 MB
EGAF50000241617 bai 5.9 MB
EGAF50000241618 bam 162.7 MB
EGAF50000241619 bai 6.0 MB
EGAF50000241620 bam 270.0 MB
EGAF50000241621 bai 6.0 MB
EGAF50000241622 bai 6.1 MB
EGAF50000241623 bam 259.0 MB
EGAF50000241624 bam 500.0 MB
EGAF50000241625 bai 6.1 MB
EGAF50000241626 bam 495.7 MB
EGAF50000241627 bai 6.0 MB
EGAF50000241628 bam 313.5 MB
EGAF50000241629 bai 6.0 MB
EGAF50000241630 bam 314.1 MB
EGAF50000241631 bai 6.0 MB
EGAF50000241632 bam 250.9 MB
EGAF50000241633 bai 6.0 MB
EGAF50000241634 bam 244.7 MB
EGAF50000241635 bai 6.0 MB
EGAF50000241636 bam 233.6 MB
EGAF50000241637 bai 5.9 MB
EGAF50000241638 bam 235.1 MB
368 Files (54.9 GB)