About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

Targeted panel somatic variant sequencing dataset for "Molecular counting enables accurate and precise quantification of methylated ctDNA"

Targeted panel somatic variant sequencing dataset for "Molecular counting enables accurate and precise quantification of methylated ctDNA." This dataset was created by running 60 cfDNA samples from patients with metastatic cancer to the lung through a research-use, tumor-naive, targeted-panel assay for measuring somatic mutations across a panel of 80 genes. All samples were sequenced on Illumina NextSeq 2000 with 150x2 paired end sequencing; files are in fastq.gz format. For the original study, the variant allele fractions of these somatic mutations were compared with the Tumor Methylation Scores calculated from Northstar Response in the same samples.

Request Access

DUO:0000024
version: 2021-02-23

publication moratorium

This data use modifier indicates that requestor agrees not to publish results of studies until a specific date.

ModifiersThe original publication for the datasets covered by this policy has yet to be published. Tentatively setting 2025-02-01 as the publication moratorium date

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000046
version: 2021-02-23

non-commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit use.

BillionToOne data access policy - methylation analytical validation paper

If you are interested in accessing the data, please email mvarga@billiontoone.com for a copy of the Data Access Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000734 Epigenetics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000256701 fastq.gz 9.8 GB Report
EGAF50000256702 fastq.gz 7.2 GB Report
EGAF50000256703 fastq.gz 7.3 GB Report
EGAF50000256724 fastq.gz 7.8 GB Report
EGAF50000256725 fastq.gz 7.6 GB Report
EGAF50000256726 fastq.gz 8.2 GB Report
EGAF50000256727 fastq.gz 8.7 GB Report
EGAF50000256728 fastq.gz 7.1 GB Report
EGAF50000256729 fastq.gz 11.0 GB Report
EGAF50000256730 fastq.gz 8.6 GB Report
EGAF50000256731 fastq.gz 9.0 GB Report
EGAF50000256820 fastq.gz 9.6 GB Report
EGAF50000256821 fastq.gz 8.2 GB Report
EGAF50000256822 fastq.gz 7.8 GB Report
EGAF50000256823 fastq.gz 6.5 GB Report
EGAF50000256824 fastq.gz 16.3 GB Report
EGAF50000256825 fastq.gz 7.6 GB Report
EGAF50000256826 fastq.gz 8.2 GB Report
EGAF50000256827 fastq.gz 9.8 GB Report
EGAF50000256828 fastq.gz 8.4 GB Report
EGAF50000256829 fastq.gz 8.6 GB Report
EGAF50000256830 fastq.gz 8.0 GB Report
EGAF50000256831 fastq.gz 7.3 GB Report
EGAF50000256832 fastq.gz 7.9 GB Report
EGAF50000256833 fastq.gz 7.7 GB Report
EGAF50000256913 fastq.gz 10.2 GB Report
EGAF50000256924 fastq.gz 10.7 GB Report
EGAF50000256929 fastq.gz 7.9 GB Report
EGAF50000256930 fastq.gz 5.9 GB Report
EGAF50000256931 fastq.gz 9.9 GB Report
EGAF50000256932 fastq.gz 8.0 GB Report
EGAF50000256934 fastq.gz 9.2 GB Report
EGAF50000256935 fastq.gz 6.2 GB Report
EGAF50000256936 fastq.gz 8.2 GB Report
EGAF50000256937 fastq.gz 7.7 GB Report
EGAF50000256938 fastq.gz 10.5 GB Report
EGAF50000256940 fastq.gz 14.7 GB Report
EGAF50000256944 fastq.gz 13.6 GB Report
EGAF50000256945 fastq.gz 13.2 GB Report
EGAF50000256947 fastq.gz 18.6 GB Report
EGAF50000256948 fastq.gz 10.1 GB Report
EGAF50000256949 fastq.gz 10.5 GB Report
EGAF50000256950 fastq.gz 7.8 GB Report
EGAF50000256951 fastq.gz 7.6 GB Report
EGAF50000256952 fastq.gz 10.2 GB Report
EGAF50000256953 fastq.gz 9.9 GB Report
EGAF50000256954 fastq.gz 10.4 GB Report
EGAF50000256955 fastq.gz 7.2 GB Report
EGAF50000256956 fastq.gz 7.5 GB Report
EGAF50000256968 fastq.gz 7.0 GB Report
EGAF50000257031 fastq.gz 8.2 GB Report
EGAF50000257032 fastq.gz 8.2 GB Report
EGAF50000257033 fastq.gz 7.2 GB Report
EGAF50000257034 fastq.gz 9.4 GB Report
EGAF50000257035 fastq.gz 8.5 GB Report
EGAF50000257036 fastq.gz 10.8 GB Report
EGAF50000257037 fastq.gz 9.4 GB Report
EGAF50000257038 fastq.gz 10.5 GB Report
EGAF50000257039 fastq.gz 15.1 GB Report
EGAF50000257044 fastq.gz 10.4 GB Report
EGAF50000257045 fastq.gz 8.0 GB Report
EGAF50000257046 fastq.gz 6.9 GB Report
EGAF50000257047 fastq.gz 10.1 GB Report
EGAF50000257048 fastq.gz 7.5 GB Report
EGAF50000257049 fastq.gz 8.3 GB Report
EGAF50000257050 fastq.gz 10.1 GB Report
EGAF50000257051 fastq.gz 14.3 GB Report
EGAF50000257052 fastq.gz 10.4 GB Report
EGAF50000257053 fastq.gz 8.4 GB Report
EGAF50000257054 fastq.gz 7.3 GB Report
EGAF50000257055 fastq.gz 10.2 GB Report
EGAF50000257056 fastq.gz 7.4 GB Report
EGAF50000257057 fastq.gz 8.1 GB Report
EGAF50000257058 fastq.gz 9.7 GB Report
EGAF50000257059 fastq.gz 9.3 GB Report
EGAF50000257060 fastq.gz 8.5 GB Report
EGAF50000257061 fastq.gz 9.1 GB Report
EGAF50000257062 fastq.gz 8.9 GB Report
EGAF50000257063 fastq.gz 8.7 GB Report
EGAF50000257064 fastq.gz 10.9 GB Report
EGAF50000257065 fastq.gz 9.7 GB Report
EGAF50000257066 fastq.gz 9.9 GB Report
EGAF50000257306 fastq.gz 7.4 GB Report
EGAF50000257308 fastq.gz 14.3 GB Report
EGAF50000257311 fastq.gz 9.6 GB Report
EGAF50000257318 fastq.gz 14.2 GB Report
EGAF50000257322 fastq.gz 6.8 GB Report
EGAF50000257324 fastq.gz 12.8 GB Report
EGAF50000257325 fastq.gz 10.7 GB Report
EGAF50000257328 fastq.gz 13.0 GB Report
EGAF50000257329 fastq.gz 13.8 GB Report
EGAF50000257330 fastq.gz 7.1 GB Report
EGAF50000257332 fastq.gz 14.7 GB Report
EGAF50000257334 fastq.gz 11.1 GB Report
EGAF50000257336 fastq.gz 13.4 GB Report
EGAF50000257339 fastq.gz 15.2 GB Report
EGAF50000257344 fastq.gz 18.0 GB Report
EGAF50000257353 fastq.gz 9.8 GB Report
EGAF50000257355 fastq.gz 7.3 GB Report
EGAF50000257356 fastq.gz 6.7 GB Report
EGAF50000257360 fastq.gz 11.3 GB Report
EGAF50000257361 fastq.gz 11.1 GB Report
EGAF50000257362 fastq.gz 14.7 GB Report
EGAF50000257364 fastq.gz 8.3 GB Report
EGAF50000257365 fastq.gz 7.8 GB Report
EGAF50000257366 fastq.gz 7.9 GB Report
EGAF50000257367 fastq.gz 7.1 GB Report
EGAF50000257370 fastq.gz 9.0 GB Report
EGAF50000257371 fastq.gz 7.0 GB Report
EGAF50000257372 fastq.gz 8.2 GB Report
EGAF50000257373 fastq.gz 8.0 GB Report
EGAF50000257374 fastq.gz 7.1 GB Report
EGAF50000257375 fastq.gz 8.5 GB Report
EGAF50000257376 fastq.gz 10.3 GB Report
EGAF50000257377 fastq.gz 9.2 GB Report
EGAF50000257378 fastq.gz 8.5 GB Report
EGAF50000257379 fastq.gz 17.1 GB Report
EGAF50000257389 fastq.gz 9.6 GB Report
EGAF50000257390 fastq.gz 10.6 GB Report
EGAF50000257397 fastq.gz 6.7 GB Report
120 Files (1.2 TB)