Targeted panel somatic variant sequencing dataset for "Molecular counting enables accurate and precise quantification of methylated ctDNA"
Targeted panel somatic variant sequencing dataset for "Molecular counting enables accurate and precise quantification of methylated ctDNA." This dataset was created by running 60 cfDNA samples from patients with metastatic cancer to the lung through a research-use, tumor-naive, targeted-panel assay for measuring somatic mutations across a panel of 80 genes. All samples were sequenced on Illumina NextSeq 2000 with 150x2 paired end sequencing; files are in fastq.gz format. For the original study, the variant allele fractions of these somatic mutations were compared with the Tumor Methylation Scores calculated from Northstar Response in the same samples.
- 12/12/2024
- 60 samples
- DAC: EGAC50000000418
- Technology: NextSeq 2000
- MOR DUO:0000024 (version: 2021-02-23)publication moratoriumThis data use modifier indicates that requestor agrees not to publish results of studies until a specific date.ModifiersThe original publication for the datasets covered by this policy has yet to be published. Tentatively setting 2025-02-01 as the publication moratorium date
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- NCU DUO:0000046 (version: 2021-02-23)non-commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit use.
BillionToOne data access policy - methylation analytical validation paper
If you are interested in accessing the data, please email mvarga@billiontoone.com for a copy of the Data Access Agreement.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS50000000734 | Epigenetics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF50000256701 | fastq.gz | 9.8 GB | ||
EGAF50000256702 | fastq.gz | 7.2 GB | ||
EGAF50000256703 | fastq.gz | 7.3 GB | ||
EGAF50000256724 | fastq.gz | 7.8 GB | ||
EGAF50000256725 | fastq.gz | 7.6 GB | ||
EGAF50000256726 | fastq.gz | 8.2 GB | ||
EGAF50000256727 | fastq.gz | 8.7 GB | ||
EGAF50000256728 | fastq.gz | 7.1 GB | ||
EGAF50000256729 | fastq.gz | 11.0 GB | ||
EGAF50000256730 | fastq.gz | 8.6 GB | ||
EGAF50000256731 | fastq.gz | 9.0 GB | ||
EGAF50000256820 | fastq.gz | 9.6 GB | ||
EGAF50000256821 | fastq.gz | 8.2 GB | ||
EGAF50000256822 | fastq.gz | 7.8 GB | ||
EGAF50000256823 | fastq.gz | 6.5 GB | ||
EGAF50000256824 | fastq.gz | 16.3 GB | ||
EGAF50000256825 | fastq.gz | 7.6 GB | ||
EGAF50000256826 | fastq.gz | 8.2 GB | ||
EGAF50000256827 | fastq.gz | 9.8 GB | ||
EGAF50000256828 | fastq.gz | 8.4 GB | ||
EGAF50000256829 | fastq.gz | 8.6 GB | ||
EGAF50000256830 | fastq.gz | 8.0 GB | ||
EGAF50000256831 | fastq.gz | 7.3 GB | ||
EGAF50000256832 | fastq.gz | 7.9 GB | ||
EGAF50000256833 | fastq.gz | 7.7 GB | ||
EGAF50000256913 | fastq.gz | 10.2 GB | ||
EGAF50000256924 | fastq.gz | 10.7 GB | ||
EGAF50000256929 | fastq.gz | 7.9 GB | ||
EGAF50000256930 | fastq.gz | 5.9 GB | ||
EGAF50000256931 | fastq.gz | 9.9 GB | ||
EGAF50000256932 | fastq.gz | 8.0 GB | ||
EGAF50000256934 | fastq.gz | 9.2 GB | ||
EGAF50000256935 | fastq.gz | 6.2 GB | ||
EGAF50000256936 | fastq.gz | 8.2 GB | ||
EGAF50000256937 | fastq.gz | 7.7 GB | ||
EGAF50000256938 | fastq.gz | 10.5 GB | ||
EGAF50000256940 | fastq.gz | 14.7 GB | ||
EGAF50000256944 | fastq.gz | 13.6 GB | ||
EGAF50000256945 | fastq.gz | 13.2 GB | ||
EGAF50000256947 | fastq.gz | 18.6 GB | ||
EGAF50000256948 | fastq.gz | 10.1 GB | ||
EGAF50000256949 | fastq.gz | 10.5 GB | ||
EGAF50000256950 | fastq.gz | 7.8 GB | ||
EGAF50000256951 | fastq.gz | 7.6 GB | ||
EGAF50000256952 | fastq.gz | 10.2 GB | ||
EGAF50000256953 | fastq.gz | 9.9 GB | ||
EGAF50000256954 | fastq.gz | 10.4 GB | ||
EGAF50000256955 | fastq.gz | 7.2 GB | ||
EGAF50000256956 | fastq.gz | 7.5 GB | ||
EGAF50000256968 | fastq.gz | 7.0 GB | ||
EGAF50000257031 | fastq.gz | 8.2 GB | ||
EGAF50000257032 | fastq.gz | 8.2 GB | ||
EGAF50000257033 | fastq.gz | 7.2 GB | ||
EGAF50000257034 | fastq.gz | 9.4 GB | ||
EGAF50000257035 | fastq.gz | 8.5 GB | ||
EGAF50000257036 | fastq.gz | 10.8 GB | ||
EGAF50000257037 | fastq.gz | 9.4 GB | ||
EGAF50000257038 | fastq.gz | 10.5 GB | ||
EGAF50000257039 | fastq.gz | 15.1 GB | ||
EGAF50000257044 | fastq.gz | 10.4 GB | ||
EGAF50000257045 | fastq.gz | 8.0 GB | ||
EGAF50000257046 | fastq.gz | 6.9 GB | ||
EGAF50000257047 | fastq.gz | 10.1 GB | ||
EGAF50000257048 | fastq.gz | 7.5 GB | ||
EGAF50000257049 | fastq.gz | 8.3 GB | ||
EGAF50000257050 | fastq.gz | 10.1 GB | ||
EGAF50000257051 | fastq.gz | 14.3 GB | ||
EGAF50000257052 | fastq.gz | 10.4 GB | ||
EGAF50000257053 | fastq.gz | 8.4 GB | ||
EGAF50000257054 | fastq.gz | 7.3 GB | ||
EGAF50000257055 | fastq.gz | 10.2 GB | ||
EGAF50000257056 | fastq.gz | 7.4 GB | ||
EGAF50000257057 | fastq.gz | 8.1 GB | ||
EGAF50000257058 | fastq.gz | 9.7 GB | ||
EGAF50000257059 | fastq.gz | 9.3 GB | ||
EGAF50000257060 | fastq.gz | 8.5 GB | ||
EGAF50000257061 | fastq.gz | 9.1 GB | ||
EGAF50000257062 | fastq.gz | 8.9 GB | ||
EGAF50000257063 | fastq.gz | 8.7 GB | ||
EGAF50000257064 | fastq.gz | 10.9 GB | ||
EGAF50000257065 | fastq.gz | 9.7 GB | ||
EGAF50000257066 | fastq.gz | 9.9 GB | ||
EGAF50000257306 | fastq.gz | 7.4 GB | ||
EGAF50000257308 | fastq.gz | 14.3 GB | ||
EGAF50000257311 | fastq.gz | 9.6 GB | ||
EGAF50000257318 | fastq.gz | 14.2 GB | ||
EGAF50000257322 | fastq.gz | 6.8 GB | ||
EGAF50000257324 | fastq.gz | 12.8 GB | ||
EGAF50000257325 | fastq.gz | 10.7 GB | ||
EGAF50000257328 | fastq.gz | 13.0 GB | ||
EGAF50000257329 | fastq.gz | 13.8 GB | ||
EGAF50000257330 | fastq.gz | 7.1 GB | ||
EGAF50000257332 | fastq.gz | 14.7 GB | ||
EGAF50000257334 | fastq.gz | 11.1 GB | ||
EGAF50000257336 | fastq.gz | 13.4 GB | ||
EGAF50000257339 | fastq.gz | 15.2 GB | ||
EGAF50000257344 | fastq.gz | 18.0 GB | ||
EGAF50000257353 | fastq.gz | 9.8 GB | ||
EGAF50000257355 | fastq.gz | 7.3 GB | ||
EGAF50000257356 | fastq.gz | 6.7 GB | ||
EGAF50000257360 | fastq.gz | 11.3 GB | ||
EGAF50000257361 | fastq.gz | 11.1 GB | ||
EGAF50000257362 | fastq.gz | 14.7 GB | ||
EGAF50000257364 | fastq.gz | 8.3 GB | ||
EGAF50000257365 | fastq.gz | 7.8 GB | ||
EGAF50000257366 | fastq.gz | 7.9 GB | ||
EGAF50000257367 | fastq.gz | 7.1 GB | ||
EGAF50000257370 | fastq.gz | 9.0 GB | ||
EGAF50000257371 | fastq.gz | 7.0 GB | ||
EGAF50000257372 | fastq.gz | 8.2 GB | ||
EGAF50000257373 | fastq.gz | 8.0 GB | ||
EGAF50000257374 | fastq.gz | 7.1 GB | ||
EGAF50000257375 | fastq.gz | 8.5 GB | ||
EGAF50000257376 | fastq.gz | 10.3 GB | ||
EGAF50000257377 | fastq.gz | 9.2 GB | ||
EGAF50000257378 | fastq.gz | 8.5 GB | ||
EGAF50000257379 | fastq.gz | 17.1 GB | ||
EGAF50000257389 | fastq.gz | 9.6 GB | ||
EGAF50000257390 | fastq.gz | 10.6 GB | ||
EGAF50000257397 | fastq.gz | 6.7 GB | ||
120 Files (1.2 TB) |