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Dataset for WGS and RNA samples of acute myeloid leukemia with MNX1 expression

This dataset contains 10 samples of WGS, ATAC, 4C and RNAseq samples of patients with acute myeloid leukemia. The sequencing was performed on Illumina HiSeq 4000, 2000 and HiSeq X using Illumina TruSeq Nano DNA and Agilent Strand Specific RNA Kits. The sequencing was always paired.

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Data Transfer Agreement for the German Cancer Research Center

To request access to the dataset please start a Data Access Request via the EGA DAC Portal. You will receive a HIPO DACO Info Form by email to collect information about the request, which has to be filled completely and signed by your PI. Your request will be evaluated by the responsible Data Access Committee (DAC) and our Data protection department (and innovation management if required). As soon as a positive decision is made, you will be provided with a data transfer agreement (DTA). After the DTA has been fully signed, access to the requested data is granted. To ensure that the process can be completed as quickly as possible, please note the following points: 1. The request in the EGA portal must be made by the responsible PI. 2. The information in the EGA portal must match the information on the HIPO DACO Info Form. In particular, the email address and the requested data sets must match. It is also important that all requested data sets are also listed on the HIPO DACO Info Form. For-profit companies are charged a fee per request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000743 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000264074 fastq.gz 37.0 GB
EGAF50000264207 fastq.gz 1.5 GB
EGAF50000264208 fastq.gz 998.6 MB
EGAF50000264238 fastq.gz 1.5 GB
EGAF50000264243 fastq.gz 38.1 GB
EGAF50000264247 fastq.gz 2.6 GB
EGAF50000264248 fastq.gz 39.0 GB
EGAF50000264249 fastq.gz 3.3 GB
EGAF50000264250 fastq.gz 3.4 GB
EGAF50000264251 fastq.gz 43.6 GB
EGAF50000264262 fastq.gz 4.0 GB
EGAF50000264267 fastq.gz 459.5 MB
EGAF50000264268 fastq.gz 311.0 MB
EGAF50000264269 fastq.gz 126.9 MB
EGAF50000264270 fastq.gz 88.6 MB
EGAF50000264374 fastq.gz 655.9 MB
EGAF50000264375 fastq.gz 504.7 MB
EGAF50000264376 fastq.gz 2.8 GB
EGAF50000264377 fastq.gz 3.1 GB
EGAF50000264378 fastq.gz 952.7 MB
EGAF50000264379 fastq.gz 1.0 GB
EGAF50000264380 fastq.gz 949.0 MB
EGAF50000264381 fastq.gz 949.2 MB
EGAF50000264382 fastq.gz 894.2 MB
EGAF50000264383 fastq.gz 951.9 MB
EGAF50000264384 fastq.gz 44.0 GB
EGAF50000264385 fastq.gz 44.2 GB
EGAF50000264386 fastq.gz 40.9 GB
EGAF50000264387 fastq.gz 37.4 GB
EGAF50000264388 fastq.gz 40.9 GB
EGAF50000264523 fastq.gz 38.2 GB
EGAF50000264526 fastq.gz 263.5 MB
EGAF50000264527 fastq.gz 4.3 GB
EGAF50000264528 fastq.gz 779.8 MB
EGAF50000264529 fastq.gz 892.8 MB
EGAF50000264530 fastq.gz 780.1 MB
EGAF50000264531 fastq.gz 820.4 MB
EGAF50000264532 fastq.gz 819.6 MB
EGAF50000264533 fastq.gz 2.7 GB
EGAF50000264534 fastq.gz 38.8 GB
EGAF50000264535 fastq.gz 43.5 GB
EGAF50000264541 fastq.gz 390.6 MB
42 Files (528.6 GB)