A non-canonical lymphoblast in refractory childhood T-cell leukaemia

Single cell mRNAseq of T-ALL samples including presentation samples for 13 with refractory disease and 8 with responsive disease, and Day 28 samples for 8 patients with refractory disease. Also includes bulk mRNA sequencing on 6 of the patients with responsive disease.

04/03/2025
29 samples
DAC: EGAC00001001579
Technologies: HiSeq X Ten, Illumina NovaSeq 6000

Access Policy1 Study 128 Files (1.4 TB)

Metadata

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HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
IS DUO:0000028 (version: 2021-02-23)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.

The data within this dataset will be made available to researchers from recognised academic institutions that wish to perform further research on related topics. Please contact the DAC for further information.

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. 1. The User Institution agrees to only use these Data for the purpose of the Project for which the User Institution has requested access, and only for Research Purposes. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 5. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS50000000767	A non-canonical lymphoblast in refractory childhood T-cell leukaemia	RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF50000275071	fastq.gz	1.9 GB
EGAF50000275072	fastq.gz	1.9 GB
EGAF50000275073	fastq.gz	21.6 GB
EGAF50000275074	fastq.gz	21.9 GB
EGAF50000275075	fastq.gz	1.5 GB
EGAF50000275076	fastq.gz	1.7 GB
EGAF50000275077	fastq.gz	17.7 GB
EGAF50000275078	fastq.gz	17.7 GB
EGAF50000275079	fastq.gz	2.0 GB
EGAF50000275080	fastq.gz	1.9 GB
EGAF50000275081	fastq.gz	21.2 GB
EGAF50000275082	fastq.gz	21.2 GB
EGAF50000275083	fastq.gz	2.0 GB
EGAF50000275084	fastq.gz	2.0 GB
EGAF50000275085	fastq.gz	21.9 GB
EGAF50000275086	fastq.gz	21.9 GB
EGAF50000275087	fastq.gz	20.0 GB
EGAF50000275088	fastq.gz	1.8 GB
EGAF50000275089	fastq.gz	1.8 GB
EGAF50000275090	fastq.gz	20.0 GB
EGAF50000275091	fastq.gz	2.1 GB
EGAF50000275092	fastq.gz	23.0 GB
EGAF50000275093	fastq.gz	2.2 GB
EGAF50000275094	fastq.gz	23.1 GB
EGAF50000275095	fastq.gz	1.7 GB
EGAF50000275096	fastq.gz	1.9 GB
EGAF50000275097	fastq.gz	18.8 GB
EGAF50000275098	fastq.gz	19.2 GB
EGAF50000275099	fastq.gz	1.4 GB
EGAF50000275100	fastq.gz	1.5 GB
EGAF50000275101	fastq.gz	16.0 GB
EGAF50000275102	fastq.gz	16.3 GB
EGAF50000275103	fq.gz	4.4 GB
EGAF50000275104	fq.gz	4.5 GB
EGAF50000275105	fq.gz	5.4 GB
EGAF50000275106	fq.gz	5.6 GB
EGAF50000275107	fastq.gz	19.7 GB
EGAF50000275108	fastq.gz	1.7 GB
EGAF50000275109	fastq.gz	1.9 GB
EGAF50000275110	fastq.gz	19.2 GB
EGAF50000275111	fastq.gz	2.0 GB
EGAF50000275112	fastq.gz	1.7 GB
EGAF50000275113	fastq.gz	19.9 GB
EGAF50000275114	fastq.gz	20.4 GB
EGAF50000275115	fastq.gz	2.2 GB
EGAF50000275116	fastq.gz	2.2 GB
EGAF50000275117	fastq.gz	20.6 GB
EGAF50000275118	fastq.gz	21.2 GB
EGAF50000275119	fastq.gz	1.9 GB
EGAF50000275120	fastq.gz	1.9 GB
EGAF50000275121	fastq.gz	20.4 GB
EGAF50000275122	fastq.gz	20.7 GB
EGAF50000275123	fastq.gz	1.9 GB
EGAF50000275124	fastq.gz	2.1 GB
EGAF50000275125	fastq.gz	20.0 GB
EGAF50000275126	fastq.gz	20.7 GB
EGAF50000275127	fastq.gz	1.5 GB
EGAF50000275128	fastq.gz	1.6 GB
EGAF50000275129	fastq.gz	15.8 GB
EGAF50000275130	fastq.gz	16.4 GB
EGAF50000275131	fastq.gz	2.1 GB
EGAF50000275132	fastq.gz	2.0 GB
EGAF50000275133	fastq.gz	22.3 GB
EGAF50000275134	fastq.gz	22.6 GB
EGAF50000275135	fastq.gz	1.6 GB
EGAF50000275136	fastq.gz	1.9 GB
EGAF50000275137	fastq.gz	17.4 GB
EGAF50000275138	fastq.gz	17.8 GB
EGAF50000275139	fastq.gz	1.9 GB
EGAF50000275140	fastq.gz	20.3 GB
EGAF50000275141	fastq.gz	20.6 GB
EGAF50000275142	fastq.gz	2.0 GB
EGAF50000275143	fastq.gz	17.4 GB
EGAF50000275144	fastq.gz	17.9 GB
EGAF50000275145	fastq.gz	1.7 GB
EGAF50000275146	fastq.gz	1.7 GB
EGAF50000275147	fastq.gz	1.7 GB
EGAF50000275148	fastq.gz	1.7 GB
EGAF50000275149	fastq.gz	18.2 GB
EGAF50000275150	fastq.gz	18.1 GB
EGAF50000275151	fastq.gz	2.2 GB
EGAF50000275152	fastq.gz	2.0 GB
EGAF50000275153	fastq.gz	19.3 GB
EGAF50000275154	fastq.gz	19.3 GB
EGAF50000275155	fastq.gz	1.7 GB
EGAF50000275156	fastq.gz	1.9 GB
EGAF50000275157	fastq.gz	18.5 GB
EGAF50000275158	fastq.gz	18.7 GB
EGAF50000275159	fastq.gz	1.9 GB
EGAF50000275160	fastq.gz	2.3 GB
EGAF50000275161	fastq.gz	23.1 GB
EGAF50000275162	fastq.gz	23.6 GB
EGAF50000275163	fq.gz	5.7 GB
EGAF50000275164	fq.gz	5.8 GB
EGAF50000275165	fastq.gz	18.9 GB
EGAF50000275166	fastq.gz	19.3 GB
EGAF50000275167	fastq.gz	1.8 GB
EGAF50000275168	fastq.gz	1.9 GB
EGAF50000275169	fastq.gz	3.1 GB
EGAF50000275170	fastq.gz	3.0 GB
EGAF50000275171	fastq.gz	30.3 GB
EGAF50000275172	fastq.gz	30.9 GB
EGAF50000275173	fq.gz	5.2 GB
EGAF50000275174	fq.gz	5.4 GB
EGAF50000275175	fq.gz	4.7 GB
EGAF50000275176	fq.gz	4.8 GB
EGAF50000275177	fq.gz	4.3 GB
EGAF50000275178	fq.gz	4.4 GB
EGAF50000275179	fastq.gz	1.8 GB
EGAF50000275180	fastq.gz	2.1 GB
EGAF50000275181	fastq.gz	21.4 GB
EGAF50000275182	fastq.gz	21.9 GB
EGAF50000275183	fastq.gz	2.4 GB
EGAF50000275184	fastq.gz	2.3 GB
EGAF50000275185	fastq.gz	25.1 GB
EGAF50000275186	fastq.gz	25.2 GB
EGAF50000275187	fastq.gz	2.4 GB
EGAF50000275188	fastq.gz	2.4 GB
EGAF50000275189	fastq.gz	27.1 GB
EGAF50000275190	fastq.gz	26.9 GB
EGAF50000275191	fastq.gz	1.6 GB
EGAF50000275192	fastq.gz	1.8 GB
EGAF50000275193	fastq.gz	18.8 GB
EGAF50000275194	fastq.gz	18.8 GB
EGAF50000275195	fastq.gz	2.3 GB
EGAF50000275196	fastq.gz	2.5 GB
EGAF50000275197	fastq.gz	25.5 GB
EGAF50000275198	fastq.gz	26.3 GB
128 Files (1.4 TB)