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High-grade serous ovarian carcinoma tumour exome sequencing variants

Tumour variants (in VCF format) from exome sequencing (using Agilent SureSelect and TWIST library preparation systems followed by sequencing on Illumina HiSeq and NovaSeq platforms) of 108 high-grade serous ovarian tumour samples. Germline variants from EGAD00001006030 for these individuals were used to call somatic and tumour-only variants separately, creating two VCF files per sample (except for one sample without paired germline data- somatic variant file only provided). The dataset comprises 215 VCF variant files.

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All requests to access data will be assessed by the Peter MacCallum Cancer Centre Data Governance Office. Emails may be directed to dgo@petermac.org.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000770 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000275278 vcf 36.5 MB
EGAF50000275282 vcf 44.4 MB
EGAF50000275283 vcf 43.8 MB
EGAF50000275284 vcf 45.3 MB
EGAF50000275285 vcf 43.4 MB
EGAF50000275286 vcf 45.4 MB
EGAF50000275287 vcf 45.6 MB
EGAF50000275288 vcf 44.3 MB
EGAF50000275289 vcf 43.0 MB
EGAF50000275290 vcf 44.0 MB
EGAF50000275291 vcf 42.9 MB
EGAF50000275292 vcf 44.0 MB
EGAF50000275293 vcf 43.3 MB
EGAF50000275294 vcf 44.2 MB
EGAF50000275295 vcf 43.2 MB
EGAF50000275296 vcf 43.2 MB
EGAF50000275297 vcf 47.6 MB
EGAF50000275298 vcf 44.4 MB
EGAF50000275299 vcf 50.3 MB
EGAF50000275300 vcf 43.8 MB
EGAF50000275301 vcf 47.0 MB
EGAF50000275302 vcf 43.4 MB
EGAF50000275303 vcf 44.0 MB
EGAF50000275304 vcf 51.3 MB
EGAF50000275305 vcf 42.6 MB
EGAF50000275306 vcf 44.1 MB
EGAF50000275307 vcf 45.4 MB
EGAF50000275308 vcf 39.6 MB
EGAF50000275309 vcf 44.0 MB
EGAF50000275310 vcf 39.5 MB
EGAF50000275311 vcf 48.7 MB
EGAF50000275312 vcf 43.8 MB
EGAF50000275313 vcf 44.3 MB
EGAF50000275314 vcf 43.0 MB
EGAF50000275315 vcf 49.2 MB
EGAF50000275316 vcf 49.1 MB
EGAF50000275317 vcf 55.1 MB
EGAF50000275318 vcf 49.4 MB
EGAF50000275319 vcf 45.1 MB
EGAF50000275320 vcf 56.4 MB
EGAF50000275321 vcf 46.9 MB
EGAF50000275322 vcf 40.4 MB
EGAF50000275323 vcf 38.7 MB
EGAF50000275324 vcf 44.6 MB
EGAF50000275325 vcf 38.3 MB
EGAF50000275326 vcf 50.9 MB
EGAF50000275327 vcf 40.7 MB
EGAF50000275328 vcf 44.1 MB
EGAF50000275329 vcf 41.4 MB
EGAF50000275330 vcf 43.1 MB
EGAF50000275331 vcf 40.3 MB
EGAF50000275332 vcf 44.8 MB
EGAF50000275333 vcf 45.5 MB
EGAF50000275334 vcf 45.4 MB
EGAF50000275335 vcf 50.0 MB
EGAF50000275336 vcf 45.6 MB
EGAF50000275337 vcf 49.5 MB
EGAF50000275338 vcf 96.6 MB
EGAF50000275339 vcf 68.2 MB
EGAF50000275340 vcf 43.8 MB
EGAF50000275341 vcf 55.4 MB
EGAF50000275342 vcf 47.8 MB
EGAF50000275343 vcf 83.2 MB
EGAF50000275344 vcf 87.5 MB
EGAF50000275345 vcf 79.0 MB
EGAF50000275346 vcf 48.4 MB
EGAF50000275347 vcf 72.8 MB
EGAF50000275348 vcf 40.2 MB
EGAF50000275349 vcf 61.9 MB
EGAF50000275350 vcf 58.8 MB
EGAF50000275351 vcf 124.4 MB
EGAF50000275352 vcf 53.7 MB
EGAF50000275353 vcf 98.4 MB
EGAF50000275354 vcf 61.7 MB
EGAF50000275355 vcf 74.1 MB
EGAF50000275356 vcf 153.4 MB
EGAF50000275357 vcf 51.2 MB
EGAF50000275358 vcf 41.0 MB
EGAF50000275359 vcf 58.7 MB
EGAF50000275360 vcf 44.2 MB
EGAF50000275361 vcf 59.7 MB
EGAF50000275362 vcf 31.1 MB
EGAF50000275363 vcf 75.1 MB
EGAF50000275364 vcf 111.0 MB
EGAF50000275365 vcf 104.2 MB
EGAF50000275366 vcf 99.2 MB
EGAF50000275367 vcf 165.0 MB
EGAF50000275368 vcf 74.5 MB
EGAF50000275369 vcf 54.2 MB
EGAF50000275370 vcf 181.3 MB
EGAF50000275371 vcf 20.4 MB
EGAF50000275372 vcf 112.8 MB
EGAF50000275373 vcf 106.1 MB
EGAF50000275374 vcf 144.9 MB
EGAF50000275375 vcf 74.3 MB
EGAF50000275376 vcf 56.1 MB
EGAF50000275377 vcf 84.3 MB
EGAF50000275378 vcf 218.7 MB
EGAF50000275379 vcf 146.3 MB
EGAF50000275380 vcf 89.9 MB
EGAF50000275381 vcf 71.8 MB
EGAF50000275382 vcf 219.0 MB
EGAF50000275383 vcf 86.2 MB
EGAF50000275384 vcf 69.2 MB
EGAF50000275385 vcf 106.6 MB
EGAF50000275386 vcf 155.8 MB
EGAF50000275387 vcf 16.0 MB
EGAF50000275388 vcf 86.1 MB
EGAF50000275389 vcf 64.6 MB
EGAF50000275390 vcf 114.0 MB
EGAF50000275391 vcf 144.0 MB
EGAF50000275392 vcf 67.0 MB
EGAF50000275393 vcf 104.7 MB
EGAF50000275394 vcf 56.0 MB
EGAF50000275395 vcf 60.6 MB
EGAF50000275396 vcf 70.1 MB
EGAF50000275397 vcf 42.9 MB
EGAF50000275398 vcf 57.2 MB
EGAF50000275399 vcf 88.4 MB
EGAF50000275400 vcf 56.8 MB
EGAF50000275401 vcf 57.0 MB
EGAF50000275402 vcf 57.7 MB
EGAF50000275403 vcf 54.4 MB
EGAF50000275404 vcf 61.7 MB
EGAF50000275405 vcf 58.4 MB
EGAF50000275406 vcf 57.1 MB
EGAF50000275407 vcf 58.2 MB
EGAF50000275408 vcf 58.0 MB
EGAF50000275409 vcf 62.5 MB
EGAF50000275410 vcf 55.7 MB
EGAF50000275411 vcf 57.7 MB
EGAF50000275412 vcf 57.8 MB
EGAF50000275413 vcf 58.6 MB
EGAF50000275414 vcf 60.7 MB
EGAF50000275415 vcf 56.4 MB
EGAF50000275416 vcf 61.1 MB
EGAF50000275417 vcf 57.9 MB
EGAF50000275418 vcf 56.3 MB
EGAF50000275419 vcf 57.1 MB
EGAF50000275420 vcf 57.0 MB
EGAF50000275421 vcf 56.5 MB
EGAF50000275422 vcf 67.4 MB
EGAF50000275423 vcf 58.0 MB
EGAF50000275424 vcf 72.3 MB
EGAF50000275425 vcf 55.2 MB
EGAF50000275426 vcf 57.6 MB
EGAF50000275427 vcf 56.3 MB
EGAF50000275428 vcf 68.6 MB
EGAF50000275429 vcf 55.8 MB
EGAF50000275430 vcf 57.9 MB
EGAF50000275431 vcf 61.0 MB
EGAF50000275432 vcf 67.8 MB
EGAF50000275433 vcf 58.6 MB
EGAF50000275434 vcf 57.7 MB
EGAF50000275435 vcf 57.1 MB
EGAF50000275436 vcf 60.3 MB
EGAF50000275437 vcf 57.0 MB
EGAF50000275438 vcf 56.8 MB
EGAF50000275439 vcf 60.3 MB
EGAF50000275440 vcf 58.6 MB
EGAF50000275441 vcf 62.1 MB
EGAF50000275442 vcf 54.5 MB
EGAF50000275443 vcf 56.4 MB
EGAF50000275444 vcf 65.4 MB
EGAF50000275445 vcf 250.3 MB
EGAF50000275446 vcf 383.1 MB
EGAF50000275447 vcf 83.2 MB
EGAF50000275448 vcf 146.1 MB
EGAF50000275449 vcf 79.7 MB
EGAF50000275450 vcf 62.2 MB
EGAF50000275451 vcf 303.3 MB
EGAF50000275452 vcf 225.1 MB
EGAF50000275453 vcf 115.8 MB
EGAF50000275454 vcf 82.2 MB
EGAF50000275455 vcf 119.2 MB
EGAF50000275456 vcf 100.1 MB
EGAF50000275457 vcf 308.1 MB
EGAF50000275458 vcf 291.1 MB
EGAF50000275459 vcf 169.9 MB
EGAF50000275460 vcf 264.4 MB
EGAF50000275461 vcf 149.0 MB
EGAF50000275462 vcf 72.3 MB
EGAF50000275463 vcf 318.3 MB
EGAF50000275464 vcf 196.0 MB
EGAF50000275465 vcf 144.3 MB
EGAF50000275466 vcf 105.6 MB
EGAF50000275467 vcf 222.8 MB
EGAF50000275468 vcf 212.9 MB
EGAF50000275469 vcf 133.2 MB
EGAF50000275470 vcf 71.3 MB
EGAF50000275471 vcf 130.4 MB
EGAF50000275472 vcf 291.8 MB
EGAF50000275473 vcf 182.3 MB
EGAF50000275474 vcf 186.8 MB
EGAF50000275475 vcf 93.8 MB
EGAF50000275476 vcf 275.0 MB
EGAF50000275477 vcf 158.8 MB
EGAF50000275478 vcf 378.4 MB
EGAF50000275479 vcf 171.6 MB
EGAF50000275480 vcf 241.0 MB
EGAF50000275481 vcf 208.4 MB
EGAF50000275482 vcf 214.9 MB
EGAF50000275483 vcf 130.5 MB
EGAF50000275484 vcf 155.5 MB
EGAF50000275485 vcf 62.4 MB
EGAF50000275486 vcf 79.7 MB
EGAF50000275487 vcf 353.7 MB
EGAF50000275488 vcf 124.1 MB
EGAF50000275489 vcf 136.6 MB
EGAF50000275490 vcf 161.6 MB
EGAF50000275491 vcf 59.9 MB
EGAF50000275492 vcf 398.5 MB
EGAF50000275493 vcf 228.3 MB
EGAF50000275494 vcf 92.1 MB
EGAF50000275495 vcf 358.3 MB
215 Files (20.0 GB)