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CAIRO2 - Shallow Whole Genome Sequencing (sWGS)

Long-term Survival Update and Extended RAS Mutational Analysis of the CAIRO2 Trial: Addition of Cetuximab to CAPOX/Bevacizumab in Metastatic Colorectal Cancer. Shallow Whole Genome Sequencing (sWGS) of 52 metastatic colorectal cancer (mCRC) samples from CAIRO2 trial. sWGS was used for mutational analysis.

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000775 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000276005 bam 1.6 GB
EGAF50000276006 bam 201.1 MB
EGAF50000276007 bam 388.7 MB
EGAF50000276013 bam 1.5 GB
EGAF50000276014 bam 1.1 GB
EGAF50000276015 bam 964.3 MB
EGAF50000276016 bam 2.2 GB
EGAF50000276019 bam 125.9 MB
EGAF50000276020 bam 605.3 MB
EGAF50000276021 bam 454.4 MB
EGAF50000276060 bam 857.1 MB
EGAF50000276062 bam 1.2 GB
EGAF50000276063 bam 1.5 GB
EGAF50000276064 bam 2.0 GB
EGAF50000276065 bam 1.5 GB
EGAF50000276066 bam 1.9 GB
EGAF50000276067 bam 2.3 GB
EGAF50000276070 bam 784.0 MB
EGAF50000276072 bam 517.3 MB
EGAF50000276095 bam 1.3 GB
EGAF50000276096 bam 490.5 MB
EGAF50000276101 bam 613.4 MB
EGAF50000276102 bam 1.8 GB
EGAF50000276107 bam 99.5 MB
EGAF50000276108 bam 1.0 GB
EGAF50000276110 bam 588.4 MB
EGAF50000276112 bam 237.2 MB
EGAF50000276114 bam 651.3 MB
EGAF50000276115 bam 129.2 MB
EGAF50000276116 bam 743.7 MB
EGAF50000276117 bam 1.8 GB
EGAF50000276118 bam 2.0 GB
EGAF50000276121 bam 746.7 MB
EGAF50000276125 bam 1.4 GB
EGAF50000276128 bam 567.7 MB
EGAF50000276129 bam 638.9 MB
EGAF50000276132 bam 603.6 MB
EGAF50000276134 bam 566.2 MB
EGAF50000276135 bam 1.7 GB
EGAF50000276139 bam 95.5 MB
EGAF50000276142 bam 1.5 GB
EGAF50000276143 bam 1.3 GB
EGAF50000276146 bam 1.1 GB
EGAF50000276147 bam 2.1 GB
EGAF50000276149 bam 572.8 MB
EGAF50000276153 bam 2.7 GB
EGAF50000276157 bam 1.1 GB
EGAF50000276159 bam 1.9 GB
EGAF50000276161 bam 1.1 GB
EGAF50000276168 bam 1.1 GB
EGAF50000276169 bam 1.7 GB
EGAF50000276170 bam 1.5 GB
52 Files (57.2 GB)