About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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scRNA seq and scTCR seq data from 5 melanoma patients

scRNA seq and scTCR seq data from 5 melanoma patients

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Netherlands Cancer Institute - Antoni van Leeuwenhoek (NKI-AVL) general policy

Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study. The researcher will need to sign a data access agreement with the NKI after approval.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000785 Transcriptome Analysis
  • Added new samples
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000277430 fastq.gz 5.0 GB
EGAF50000277431 fastq.gz 12.4 GB
EGAF50000277432 fastq.gz 968.3 MB
EGAF50000277433 fastq.gz 2.4 GB
EGAF50000277434 fastq.gz 4.8 GB
EGAF50000277435 fastq.gz 1.9 GB
EGAF50000277436 fastq.gz 776.2 MB
EGAF50000277437 fastq.gz 332.0 MB
EGAF50000277438 fastq.gz 7.8 GB
EGAF50000277439 fastq.gz 19.9 GB
EGAF50000277440 fastq.gz 2.0 GB
EGAF50000277441 fastq.gz 5.0 GB
EGAF50000277442 fastq.gz 3.6 GB
EGAF50000277443 fastq.gz 8.6 GB
EGAF50000277444 fastq.gz 892.4 MB
EGAF50000277445 fastq.gz 2.0 GB
EGAF50000277446 fastq.gz 1.7 GB
EGAF50000277447 fastq.gz 4.1 GB
EGAF50000277448 fastq.gz 2.0 GB
EGAF50000277449 fastq.gz 1.0 GB
EGAF50000277450 fastq.gz 1.7 GB
EGAF50000277451 fastq.gz 916.1 MB
EGAF50000277452 fastq.gz 5.4 GB
EGAF50000277453 fastq.gz 13.1 GB
EGAF50000277454 fastq.gz 2.4 GB
EGAF50000277455 fastq.gz 1.1 GB
EGAF50000277456 fastq.gz 6.4 GB
EGAF50000277457 fastq.gz 15.9 GB
EGAF50000277458 fastq.gz 4.6 GB
EGAF50000277459 fastq.gz 2.0 GB
EGAF50000277460 fastq.gz 4.9 GB
EGAF50000277461 fastq.gz 2.1 GB
EGAF50000277462 fastq.gz 1.1 GB
EGAF50000277463 fastq.gz 490.4 MB
EGAF50000277464 fastq.gz 6.1 GB
EGAF50000277465 fastq.gz 14.8 GB
EGAF50000277466 fastq.gz 1.6 GB
EGAF50000277467 fastq.gz 3.8 GB
EGAF50000277468 fastq.gz 3.0 GB
EGAF50000277469 fastq.gz 7.1 GB
EGAF50000277470 fastq.gz 1.5 GB
EGAF50000277471 fastq.gz 661.3 MB
EGAF50000277472 fastq.gz 7.1 GB
EGAF50000277473 fastq.gz 17.3 GB
EGAF50000277474 fastq.gz 3.9 GB
EGAF50000277475 fastq.gz 1.7 GB
EGAF50000277476 fastq.gz 1.5 GB
EGAF50000277477 fastq.gz 9.4 GB
EGAF50000277478 fastq.gz 4.3 GB
EGAF50000277479 fastq.gz 2.2 GB
EGAF50000277480 fastq.gz 7.1 GB
EGAF50000277481 fastq.gz 17.3 GB
EGAF50000277482 fastq.gz 1.7 GB
EGAF50000277483 fastq.gz 3.8 GB
EGAF50000277484 fastq.gz 7.3 GB
EGAF50000277485 fastq.gz 17.7 GB
EGAF50000415865 fastq 42.3 GB
EGAF50000415866 fastq 21.5 GB
EGAF50000415867 fastq 6.7 GB
EGAF50000415868 fastq 13.3 GB
EGAF50000415869 fastq 4.3 GB
EGAF50000415870 fastq 8.4 GB
62 Files (386.7 GB)