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Young-Boost Whole Exome Sequencing (WES)

Datasets associated with Young Boost Trial for Breast Cancer patients. Whole Exome Sequencing (WES) performed on 109 Samples (75 Tumor and 34 Normal). WES was performed to identify potential predictive biomarkers for treatment response.

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000797 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000286714 bam 17.6 GB
EGAF50000286715 bam 4.9 GB
EGAF50000286716 bam 29.9 GB
EGAF50000286717 bam 23.2 GB
EGAF50000286718 bam 11.5 GB
EGAF50000286719 bam 17.5 GB
EGAF50000286720 bam 17.8 GB
EGAF50000286721 bam 21.1 GB
EGAF50000286722 bam 19.2 GB
EGAF50000286723 bam 2.9 GB
EGAF50000286724 bam 3.8 GB
EGAF50000286725 bam 3.2 GB
EGAF50000286726 bam 4.9 GB
EGAF50000286727 bam 3.5 GB
EGAF50000286728 bam 25.8 GB
EGAF50000286729 bam 4.1 GB
EGAF50000286730 bam 3.1 GB
EGAF50000286731 bam 4.3 GB
EGAF50000286732 bam 3.0 GB
EGAF50000286733 bam 27.1 GB
EGAF50000286734 bam 4.4 GB
EGAF50000286735 bam 30.6 GB
EGAF50000286736 bam 4.1 GB
EGAF50000286737 bam 24.0 GB
EGAF50000286738 bam 3.7 GB
EGAF50000286739 bam 10.6 GB
EGAF50000286740 bam 2.1 GB
EGAF50000286741 bam 13.0 GB
EGAF50000286742 bam 2.0 GB
EGAF50000286743 bam 3.4 GB
EGAF50000286744 bam 22.3 GB
EGAF50000286745 bam 24.7 GB
EGAF50000286746 bam 18.6 GB
EGAF50000286747 bam 57.7 GB
EGAF50000286748 bam 11.6 GB
EGAF50000286749 bam 9.1 GB
EGAF50000286750 bam 19.2 GB
EGAF50000286751 bam 39.6 GB
EGAF50000286752 bam 5.1 GB
EGAF50000286753 bam 20.8 GB
EGAF50000286754 bam 16.6 GB
EGAF50000286755 bam 27.5 GB
EGAF50000286756 bam 12.9 GB
EGAF50000286757 bam 5.5 GB
EGAF50000286758 bam 53.9 GB
EGAF50000286759 bam 15.5 GB
EGAF50000286760 bam 3.4 GB
EGAF50000286761 bam 14.8 GB
EGAF50000286762 bam 20.2 GB
EGAF50000286763 bam 4.4 GB
EGAF50000286764 bam 14.3 GB
EGAF50000286765 bam 21.1 GB
EGAF50000286766 bam 25.0 GB
EGAF50000286767 bam 39.2 GB
EGAF50000286768 bam 22.4 GB
EGAF50000286769 bam 17.0 GB
EGAF50000286770 bam 15.8 GB
EGAF50000286771 bam 21.3 GB
EGAF50000286772 bam 13.3 GB
EGAF50000286773 bam 2.4 GB
EGAF50000286774 bam 5.5 GB
EGAF50000286775 bam 13.9 GB
EGAF50000286776 bam 4.3 GB
EGAF50000286777 bam 3.3 GB
EGAF50000286778 bam 15.6 GB
EGAF50000286779 bam 5.2 GB
EGAF50000286780 bam 12.6 GB
EGAF50000286781 bam 18.7 GB
EGAF50000286782 bam 14.3 GB
EGAF50000286783 bam 17.9 GB
EGAF50000286784 bam 19.9 GB
EGAF50000286785 bam 15.9 GB
EGAF50000286786 bam 9.6 GB
EGAF50000286787 bam 30.6 GB
EGAF50000286788 bam 18.3 GB
EGAF50000286789 bam 10.3 GB
EGAF50000286790 bam 10.8 GB
EGAF50000286791 bam 26.4 GB
EGAF50000286792 bam 17.5 GB
EGAF50000286793 bam 16.7 GB
EGAF50000286794 bam 7.5 GB
EGAF50000286795 bam 16.8 GB
EGAF50000286796 bam 19.5 GB
EGAF50000286797 bam 14.6 GB
EGAF50000286798 bam 13.9 GB
EGAF50000286799 bam 19.7 GB
EGAF50000286800 bam 19.8 GB
EGAF50000286801 bam 3.8 GB
EGAF50000286802 bam 15.6 GB
EGAF50000286803 bam 3.2 GB
EGAF50000286804 bam 2.8 GB
EGAF50000286805 bam 6.4 GB
EGAF50000286806 bam 27.5 GB
EGAF50000286807 bam 21.1 GB
EGAF50000286808 bam 13.0 GB
EGAF50000286809 bam 16.1 GB
EGAF50000286810 bam 28.9 GB
EGAF50000286811 bam 14.4 GB
EGAF50000286812 bam 31.6 GB
EGAF50000286813 bam 13.5 GB
EGAF50000286814 bam 13.3 GB
EGAF50000286815 bam 31.0 GB
EGAF50000286816 bam 21.0 GB
EGAF50000286817 bam 3.5 GB
EGAF50000286818 bam 2.8 GB
EGAF50000286819 bam 3.9 GB
EGAF50000286820 bam 19.1 GB
EGAF50000286821 bam 15.3 GB
EGAF50000286822 bam 11.3 GB
109 Files (1.7 TB)