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Single cell RNAseq, TCRseq, BCRseq and CITE-seq of deep cervical lymph nodes from healthy donors

These raw sequencing dataset includes 10x Genomics 5' scRNA-seq, TCR-seq, BCR-seq, and CITE-seq profiles of cells isolated from the deep cervical lymph nodes of three healthy controls.

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Data access policy to single cell OMICS data from MS cervical lymph node

The proposed research use must be consistent with the specific data use limitation for this study. Data use requests will be evaluated based on the Helsinki University Hospital ethics committee permit concerning the samples.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000843 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000311069 fastq.gz 1.1 GB
EGAF50000311070 fastq.gz 4.4 GB
EGAF50000311071 fastq.gz 776.8 MB
EGAF50000311075 fastq.gz 360.6 MB
EGAF50000311076 fastq.gz 720.4 MB
EGAF50000311080 fastq.gz 2.1 GB
EGAF50000311081 fastq.gz 2.4 GB
EGAF50000311083 fastq.gz 1.9 GB
EGAF50000311088 fastq.gz 3.6 GB
EGAF50000311090 fastq.gz 2.6 GB
EGAF50000311092 fastq.gz 2.2 GB
EGAF50000311097 fastq.gz 3.6 GB
EGAF50000311098 fastq.gz 6.6 GB
EGAF50000311100 fastq.gz 8.4 GB
EGAF50000311104 fastq.gz 11.3 GB
EGAF50000311108 fastq.gz 1.9 GB
EGAF50000311109 fastq.gz 2.2 GB
EGAF50000311110 fastq.gz 16.4 GB
EGAF50000311114 fastq.gz 2.4 GB
EGAF50000311117 fastq.gz 804.8 MB
EGAF50000311118 fastq.gz 770.7 MB
EGAF50000311122 fastq.gz 28.2 GB
EGAF50000311124 fastq.gz 1.9 GB
EGAF50000311127 fastq.gz 801.4 MB
EGAF50000311128 fastq.gz 1.6 GB
EGAF50000311129 fastq.gz 279.3 MB
EGAF50000311130 fastq.gz 378.6 MB
EGAF50000311131 fastq.gz 8.4 GB
EGAF50000311133 fastq.gz 625.2 MB
EGAF50000311136 fastq.gz 4.1 GB
EGAF50000311137 fastq.gz 16.5 GB
EGAF50000311138 fastq.gz 302.7 MB
EGAF50000311139 fastq.gz 327.2 MB
EGAF50000311140 fastq.gz 791.2 MB
EGAF50000311141 fastq.gz 1.6 GB
EGAF50000311146 fastq.gz 326.6 MB
EGAF50000311147 fastq.gz 813.9 MB
EGAF50000311155 fastq.gz 617.5 MB
EGAF50000311156 fastq.gz 753.5 MB
EGAF50000311157 fastq.gz 1.9 GB
EGAF50000311159 fastq.gz 362.2 MB
EGAF50000311160 fastq.gz 289.8 MB
EGAF50000311167 fastq.gz 790.2 MB
EGAF50000311168 fastq.gz 373.8 MB
EGAF50000311169 fastq.gz 839.9 MB
EGAF50000311170 fastq.gz 341.4 MB
EGAF50000311175 fastq.gz 1.8 GB
EGAF50000311176 fastq.gz 298.3 MB
EGAF50000311177 fastq.gz 349.4 MB
EGAF50000311178 fastq.gz 1.9 GB
EGAF50000311179 fastq.gz 369.7 MB
EGAF50000311183 fastq.gz 128.9 MB
EGAF50000311184 fastq.gz 149.4 MB
EGAF50000311185 fastq.gz 1.9 GB
EGAF50000311186 fastq.gz 120.5 MB
EGAF50000311189 fastq.gz 307.2 MB
EGAF50000311190 fastq.gz 1.6 GB
EGAF50000311192 fastq.gz 1.9 GB
EGAF50000311198 fastq.gz 377.9 MB
EGAF50000311199 fastq.gz 20.5 GB
EGAF50000311200 fastq.gz 2.6 GB
EGAF50000311205 fastq.gz 703.1 MB
EGAF50000311208 fastq.gz 349.2 MB
EGAF50000311209 fastq.gz 320.6 MB
EGAF50000311210 fastq.gz 382.0 MB
EGAF50000311211 fastq.gz 6.7 GB
EGAF50000311212 fastq.gz 333.3 MB
EGAF50000311213 fastq.gz 20.7 GB
EGAF50000311216 fastq.gz 275.8 MB
EGAF50000311218 fastq.gz 856.4 MB
EGAF50000311219 fastq.gz 360.0 MB
EGAF50000311220 fastq.gz 715.5 MB
EGAF50000311221 fastq.gz 129.3 MB
EGAF50000311222 fastq.gz 149.4 MB
EGAF50000311223 fastq.gz 807.6 MB
EGAF50000311224 fastq.gz 154.0 MB
EGAF50000311225 fastq.gz 377.1 MB
EGAF50000311226 fastq.gz 120.2 MB
EGAF50000311227 fastq.gz 154.0 MB
EGAF50000311229 fastq.gz 1.6 GB
80 Files (218.7 GB)