Single cell RNAseq, TCRseq, BCRseq and CITE-seq of deep cervical lymph nodes from Multiple sclerosis patients
These raw sequencing dataset includes 10x Genomics 5' scRNA-seq, TCR-seq, BCR-seq, and CITE-seq profiles of cells isolated from the deep cervical lymph nodes of six Multiple sclerosis (MS) patients.
- 12/03/2025
- 6 samples
- DAC: EGAC50000000524
- Technology: Illumina NovaSeq 6000
Data access policy to single cell OMICS data from MS cervical lymph node
The proposed research use must be consistent with the specific data use limitation for this study. Data use requests will be evaluated based on the Helsinki University Hospital ethics committee permit concerning the samples.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000843 | Transcriptome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000311072 | fastq.gz | 680.7 MB | ||
| EGAF50000311073 | fastq.gz | 1.3 GB | ||
| EGAF50000311074 | fastq.gz | 775.7 MB | ||
| EGAF50000311077 | fastq.gz | 4.1 GB | ||
| EGAF50000311078 | fastq.gz | 4.1 GB | ||
| EGAF50000311079 | fastq.gz | 2.7 GB | ||
| EGAF50000311082 | fastq.gz | 1.5 GB | ||
| EGAF50000311084 | fastq.gz | 3.2 GB | ||
| EGAF50000311085 | fastq.gz | 1.7 GB | ||
| EGAF50000311086 | fastq.gz | 4.6 GB | ||
| EGAF50000311087 | fastq.gz | 2.8 GB | ||
| EGAF50000311089 | fastq.gz | 3.0 GB | ||
| EGAF50000311091 | fastq.gz | 4.0 GB | ||
| EGAF50000311093 | fastq.gz | 3.2 GB | ||
| EGAF50000311094 | fastq.gz | 3.6 GB | ||
| EGAF50000311095 | fastq.gz | 7.8 GB | ||
| EGAF50000311096 | fastq.gz | 4.4 GB | ||
| EGAF50000311099 | fastq.gz | 8.5 GB | ||
| EGAF50000311101 | fastq.gz | 14.4 GB | ||
| EGAF50000311102 | fastq.gz | 11.4 GB | ||
| EGAF50000311103 | fastq.gz | 10.7 GB | ||
| EGAF50000311105 | fastq.gz | 14.0 GB | ||
| EGAF50000311106 | fastq.gz | 500.6 MB | ||
| EGAF50000311107 | fastq.gz | 19.3 GB | ||
| EGAF50000311111 | fastq.gz | 480.0 MB | ||
| EGAF50000311112 | fastq.gz | 1.2 GB | ||
| EGAF50000311113 | fastq.gz | 609.3 MB | ||
| EGAF50000311115 | fastq.gz | 1.6 GB | ||
| EGAF50000311116 | fastq.gz | 3.5 GB | ||
| EGAF50000311119 | fastq.gz | 621.4 MB | ||
| EGAF50000311120 | fastq.gz | 21.6 GB | ||
| EGAF50000311121 | fastq.gz | 36.1 GB | ||
| EGAF50000311123 | fastq.gz | 1.6 GB | ||
| EGAF50000311125 | fastq.gz | 3.5 GB | ||
| EGAF50000311126 | fastq.gz | 3.3 GB | ||
| EGAF50000311132 | fastq.gz | 516.1 MB | ||
| EGAF50000311134 | fastq.gz | 601.0 MB | ||
| EGAF50000311135 | fastq.gz | 1.5 GB | ||
| EGAF50000311142 | fastq.gz | 548.1 MB | ||
| EGAF50000311143 | fastq.gz | 616.4 MB | ||
| EGAF50000311144 | fastq.gz | 1.4 GB | ||
| EGAF50000311145 | fastq.gz | 3.0 GB | ||
| EGAF50000311148 | fastq.gz | 254.9 MB | ||
| EGAF50000311149 | fastq.gz | 1.5 GB | ||
| EGAF50000311150 | fastq.gz | 3.3 GB | ||
| EGAF50000311151 | fastq.gz | 732.2 MB | ||
| EGAF50000311152 | fastq.gz | 686.0 MB | ||
| EGAF50000311153 | fastq.gz | 1.8 GB | ||
| EGAF50000311154 | fastq.gz | 26.4 GB | ||
| EGAF50000311158 | fastq.gz | 424.9 MB | ||
| EGAF50000311161 | fastq.gz | 594.7 MB | ||
| EGAF50000311162 | fastq.gz | 625.9 MB | ||
| EGAF50000311163 | fastq.gz | 361.2 MB | ||
| EGAF50000311164 | fastq.gz | 1.2 GB | ||
| EGAF50000311165 | fastq.gz | 653.3 MB | ||
| EGAF50000311166 | fastq.gz | 802.5 MB | ||
| EGAF50000311171 | fastq.gz | 625.9 MB | ||
| EGAF50000311172 | fastq.gz | 2.9 GB | ||
| EGAF50000311173 | fastq.gz | 254.6 MB | ||
| EGAF50000311174 | fastq.gz | 1.9 GB | ||
| EGAF50000311180 | fastq.gz | 273.2 MB | ||
| EGAF50000311181 | fastq.gz | 2.4 GB | ||
| EGAF50000311182 | fastq.gz | 3.7 GB | ||
| EGAF50000311187 | fastq.gz | 268.7 MB | ||
| EGAF50000311188 | fastq.gz | 3.7 GB | ||
| EGAF50000311191 | fastq.gz | 782.7 MB | ||
| EGAF50000311193 | fastq.gz | 1.5 GB | ||
| EGAF50000311194 | fastq.gz | 4.5 GB | ||
| EGAF50000311195 | fastq.gz | 855.9 MB | ||
| EGAF50000311196 | fastq.gz | 1.6 GB | ||
| EGAF50000311197 | fastq.gz | 252.3 MB | ||
| EGAF50000311201 | fastq.gz | 517.3 MB | ||
| EGAF50000311202 | fastq.gz | 613.0 MB | ||
| EGAF50000311203 | fastq.gz | 493.9 MB | ||
| EGAF50000311204 | fastq.gz | 528.7 MB | ||
| EGAF50000311206 | fastq.gz | 34.4 GB | ||
| EGAF50000311207 | fastq.gz | 503.7 MB | ||
| EGAF50000311214 | fastq.gz | 2.5 GB | ||
| EGAF50000311215 | fastq.gz | 1.5 GB | ||
| EGAF50000311217 | fastq.gz | 27.9 GB | ||
| EGAF50000311228 | fastq.gz | 302.8 MB | ||
| EGAF50000311230 | fastq.gz | 977.4 MB | ||
| EGAF50000311231 | fastq.gz | 2.2 GB | ||
| EGAF50000311232 | fastq.gz | 2.6 GB | ||
| EGAF50000311233 | fastq.gz | 668.5 MB | ||
| EGAF50000311234 | fastq.gz | 262.5 MB | ||
| EGAF50000311235 | fastq.gz | 278.0 MB | ||
| EGAF50000311236 | fastq.gz | 437.8 MB | ||
| 88 Files (356.1 GB) | ||||