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CHIP panel sequencing of rheumatoid arthritis patients

Targeted NGS sequencing data (bam and index files aligned to hg38) a total of 573 newly diagnosed, untreated RA patients and 163 healthy controls. The sequencing panel included 65 genes recurrently mutated in myeloid malignancies, to capture clonal hematopoiesis of indeterminate potential (CHIP) mutations. The median target coverage was 1700x across samples.

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HRUH data access policy

The proposed research use must be in agreement with the specific data use limitation for this study. Data use requests will be evaluated based on the Helsinki University Hospital ethics committee permit concerning the samples.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000890 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000320010 bam 428.4 MB
EGAF50000320011 bam 429.0 MB
EGAF50000320012 bam 487.4 MB
EGAF50000320013 bam 375.6 MB
EGAF50000320014 bam 383.6 MB
EGAF50000320015 bam 378.2 MB
EGAF50000320016 bam 362.1 MB
EGAF50000320017 bam 430.1 MB
EGAF50000320018 bam 414.4 MB
EGAF50000320019 bam 431.6 MB
EGAF50000320020 bam 321.4 MB
EGAF50000320021 bam 433.0 MB
EGAF50000320022 bam 369.6 MB
EGAF50000320023 bam 445.5 MB
EGAF50000320024 bam 417.4 MB
EGAF50000320025 bam 420.5 MB
EGAF50000320026 bam 376.0 MB
EGAF50000320027 bam 444.7 MB
EGAF50000320028 bam 388.2 MB
EGAF50000320029 bam 385.6 MB
EGAF50000320030 bam 371.2 MB
EGAF50000320031 bam 369.8 MB
EGAF50000320032 bam 426.6 MB
EGAF50000320033 bam 411.3 MB
EGAF50000320034 bam 401.6 MB
EGAF50000320035 bam 381.5 MB
EGAF50000320036 bam 413.6 MB
EGAF50000320037 bam 407.8 MB
EGAF50000320038 bam 409.9 MB
EGAF50000320039 bam 456.6 MB
EGAF50000320040 bai 5.4 MB
EGAF50000320041 bai 5.4 MB
EGAF50000320042 bai 5.5 MB
EGAF50000320043 bai 5.2 MB
EGAF50000320044 bai 5.3 MB
EGAF50000320045 bai 5.3 MB
EGAF50000320046 bai 5.4 MB
EGAF50000320047 bai 5.3 MB
EGAF50000320048 bai 5.4 MB
EGAF50000320049 bai 5.1 MB
EGAF50000320050 bai 5.3 MB
EGAF50000320051 bai 5.4 MB
EGAF50000320052 bai 5.2 MB
EGAF50000320053 bai 5.4 MB
EGAF50000320054 bai 5.3 MB
EGAF50000320055 bai 5.4 MB
EGAF50000320056 bai 5.4 MB
EGAF50000320057 bai 5.4 MB
EGAF50000320058 bai 5.4 MB
EGAF50000320059 bai 5.3 MB
EGAF50000320060 bai 5.3 MB
EGAF50000320061 bai 5.3 MB
EGAF50000320062 bai 5.4 MB
EGAF50000320063 bai 5.4 MB
EGAF50000320064 bai 5.4 MB
EGAF50000320065 bai 5.3 MB
EGAF50000320066 bai 5.4 MB
EGAF50000320067 bai 5.4 MB
EGAF50000320068 bai 5.4 MB
EGAF50000320069 bai 5.5 MB
EGAF50000320070 bai 5.4 MB
EGAF50000320071 bai 5.5 MB
EGAF50000320072 bai 5.4 MB
EGAF50000320073 bai 5.5 MB
EGAF50000320074 bai 5.5 MB
EGAF50000320075 bai 5.4 MB
EGAF50000320076 bai 5.5 MB
EGAF50000320077 bai 5.6 MB
EGAF50000320078 bai 5.6 MB
EGAF50000320079 bai 5.6 MB
EGAF50000320080 bai 5.5 MB
EGAF50000320081 bai 5.6 MB
EGAF50000320082 bai 5.5 MB
EGAF50000320083 bai 5.5 MB
EGAF50000320084 bai 5.6 MB
EGAF50000320085 bai 5.7 MB
EGAF50000320086 bai 5.6 MB
EGAF50000320087 bai 5.7 MB
EGAF50000320088 bai 5.6 MB
EGAF50000320089 bai 5.6 MB
EGAF50000320090 bai 5.1 MB
EGAF50000320091 bai 5.2 MB
EGAF50000320092 bai 5.1 MB
EGAF50000320093 bai 5.1 MB
EGAF50000320094 bai 5.2 MB
EGAF50000320095 bai 5.1 MB
EGAF50000320096 bai 5.1 MB
EGAF50000320097 bai 5.3 MB
EGAF50000320098 bai 5.1 MB
EGAF50000320099 bai 5.0 MB
EGAF50000320100 bai 5.2 MB
EGAF50000320101 bai 5.1 MB
EGAF50000320102 bai 5.2 MB
EGAF50000320103 bai 5.1 MB
EGAF50000320104 bai 5.1 MB
EGAF50000320105 bai 5.2 MB
EGAF50000320106 bai 5.1 MB
EGAF50000320107 bai 5.1 MB
EGAF50000320108 bai 5.2 MB
EGAF50000320109 bai 5.3 MB
EGAF50000320110 bai 5.2 MB
EGAF50000320111 bai 5.3 MB
EGAF50000320112 bai 5.2 MB
EGAF50000320113 bai 5.5 MB
EGAF50000320114 bai 5.3 MB
EGAF50000320115 bai 4.9 MB
EGAF50000320116 bai 5.3 MB
EGAF50000320117 bai 5.1 MB
EGAF50000320118 bai 5.1 MB
EGAF50000320119 bai 5.2 MB
EGAF50000320120 bai 5.2 MB
EGAF50000320121 bai 5.2 MB
EGAF50000320122 bai 5.2 MB
EGAF50000320123 bai 5.1 MB
EGAF50000320124 bai 5.2 MB
EGAF50000320125 bai 5.1 MB
EGAF50000320126 bai 5.1 MB
EGAF50000320127 bai 5.2 MB
EGAF50000320128 bai 5.2 MB
EGAF50000320129 bai 5.2 MB
EGAF50000320130 bai 5.1 MB
EGAF50000320131 bai 5.1 MB
EGAF50000320132 bai 5.1 MB
EGAF50000320133 bai 5.2 MB
EGAF50000320134 bai 5.3 MB
EGAF50000320135 bai 5.3 MB
EGAF50000320136 bai 5.2 MB
EGAF50000320137 bai 5.2 MB
EGAF50000320138 bai 5.1 MB
EGAF50000320139 bai 6.3 MB
EGAF50000320140 bai 6.1 MB
EGAF50000320141 bai 6.1 MB
EGAF50000320142 bai 6.2 MB
EGAF50000320143 bai 6.2 MB
EGAF50000320144 bai 6.0 MB
EGAF50000320145 bai 6.1 MB
EGAF50000320146 bai 6.2 MB
EGAF50000320147 bai 6.1 MB
EGAF50000320148 bai 6.2 MB
EGAF50000320149 bai 6.1 MB
EGAF50000320150 bai 6.1 MB
EGAF50000320151 bai 6.2 MB
EGAF50000320152 bai 5.2 MB
EGAF50000320153 bai 5.2 MB
EGAF50000320154 bai 5.1 MB
EGAF50000320155 bai 5.5 MB
EGAF50000320156 bai 5.4 MB
EGAF50000320157 bai 5.4 MB
EGAF50000320158 bai 5.5 MB
EGAF50000320159 bai 5.4 MB
EGAF50000320160 bai 5.3 MB
EGAF50000320161 bai 5.1 MB
EGAF50000320162 bai 5.3 MB
EGAF50000320163 bai 5.4 MB
EGAF50000320164 bai 5.5 MB
EGAF50000320165 bai 5.5 MB
EGAF50000320166 bai 5.5 MB
EGAF50000320167 bai 5.4 MB
EGAF50000320168 bai 5.1 MB
EGAF50000320169 bai 5.1 MB
EGAF50000320170 bai 5.3 MB
EGAF50000320171 bai 5.6 MB
EGAF50000320172 bai 5.4 MB
EGAF50000320173 bai 5.5 MB
EGAF50000320174 bai 5.5 MB
EGAF50000320175 bai 5.4 MB
EGAF50000320176 bai 5.3 MB
EGAF50000320177 bai 5.0 MB
EGAF50000320178 bai 5.6 MB
EGAF50000320179 bai 5.6 MB
EGAF50000320180 bai 5.4 MB
EGAF50000320181 bai 5.5 MB
EGAF50000320182 bai 5.4 MB
EGAF50000320183 bai 5.9 MB
EGAF50000320184 bai 6.1 MB
EGAF50000320185 bai 5.4 MB
EGAF50000320186 bai 6.0 MB
EGAF50000320187 bai 6.1 MB
EGAF50000320188 bai 6.1 MB
EGAF50000320189 bai 6.1 MB
EGAF50000320190 bai 6.1 MB
EGAF50000320191 bai 6.1 MB
EGAF50000320192 bai 5.9 MB
EGAF50000320193 bai 5.9 MB
EGAF50000320194 bai 6.1 MB
EGAF50000320195 bai 6.1 MB
EGAF50000320196 bai 6.0 MB
EGAF50000320197 bai 6.1 MB
EGAF50000320198 bai 6.1 MB
EGAF50000320199 bai 5.0 MB
EGAF50000320200 bai 6.1 MB
EGAF50000320201 bai 5.3 MB
EGAF50000320202 bai 5.5 MB
EGAF50000320203 bai 5.6 MB
EGAF50000320204 bai 5.4 MB
EGAF50000320205 bai 5.3 MB
EGAF50000320206 bai 5.5 MB
EGAF50000320207 bai 5.5 MB
EGAF50000320208 bai 4.9 MB
EGAF50000320209 bai 5.2 MB
EGAF50000320210 bai 5.3 MB
EGAF50000320211 bai 5.5 MB
EGAF50000320212 bai 5.5 MB
EGAF50000320213 bai 5.4 MB
EGAF50000320214 bai 5.6 MB
EGAF50000320215 bai 5.1 MB
EGAF50000320216 bai 5.5 MB
EGAF50000320217 bai 5.3 MB
EGAF50000320218 bai 5.3 MB
EGAF50000320219 bai 5.4 MB
EGAF50000320220 bai 5.5 MB
EGAF50000320221 bai 5.6 MB
EGAF50000320222 bai 5.4 MB
EGAF50000320223 bai 5.6 MB
EGAF50000320224 bai 5.1 MB
EGAF50000320225 bai 5.2 MB
EGAF50000320226 bai 5.4 MB
EGAF50000320227 bai 5.4 MB
EGAF50000320228 bai 5.6 MB
EGAF50000320229 bai 5.6 MB
EGAF50000320230 bai 5.5 MB
EGAF50000320231 bai 5.5 MB
EGAF50000320232 bai 6.2 MB
EGAF50000320233 bai 5.7 MB
EGAF50000320234 bai 6.2 MB
EGAF50000320235 bai 6.2 MB
EGAF50000320236 bai 6.3 MB
EGAF50000320237 bai 6.2 MB
EGAF50000320238 bai 6.2 MB
EGAF50000320239 bai 6.2 MB
EGAF50000320240 bai 6.2 MB
EGAF50000320241 bai 6.2 MB
EGAF50000320242 bai 6.2 MB
EGAF50000320243 bai 6.2 MB
EGAF50000320244 bai 6.4 MB
EGAF50000320245 bai 6.2 MB
EGAF50000320246 bai 6.2 MB
EGAF50000320247 bai 6.2 MB
EGAF50000320248 bai 5.4 MB
EGAF50000320249 bai 5.5 MB
EGAF50000320250 bai 2.7 MB
EGAF50000320251 bai 5.3 MB
EGAF50000320252 bai 5.6 MB
EGAF50000320253 bai 5.5 MB
EGAF50000320254 bai 5.4 MB
EGAF50000320255 bai 5.5 MB
EGAF50000320256 bai 5.4 MB
EGAF50000320257 bai 5.5 MB
EGAF50000320258 bai 5.5 MB
EGAF50000320259 bai 5.5 MB
EGAF50000320260 bai 5.5 MB
EGAF50000320261 bai 5.4 MB
EGAF50000320262 bai 5.5 MB
EGAF50000320263 bai 5.3 MB
EGAF50000320264 bai 5.4 MB
EGAF50000320265 bai 5.4 MB
EGAF50000320266 bai 5.5 MB
EGAF50000320267 bai 5.4 MB
EGAF50000320268 bai 5.5 MB
EGAF50000320269 bai 5.5 MB
EGAF50000320270 bai 5.4 MB
EGAF50000320271 bai 5.4 MB
EGAF50000320272 bai 5.4 MB
EGAF50000320273 bai 5.4 MB
EGAF50000320274 bai 5.5 MB
EGAF50000320275 bai 5.5 MB
EGAF50000320276 bai 5.5 MB
EGAF50000320277 bai 5.4 MB
EGAF50000320278 bai 5.5 MB
EGAF50000320279 bai 5.4 MB
EGAF50000320280 bai 5.5 MB
EGAF50000320281 bai 5.5 MB
EGAF50000320282 bai 5.5 MB
EGAF50000320283 bai 5.4 MB
EGAF50000320284 bai 5.5 MB
EGAF50000320285 bai 5.5 MB
EGAF50000320286 bai 5.5 MB
EGAF50000320287 bai 5.6 MB
EGAF50000320288 bai 5.4 MB
EGAF50000320289 bai 5.5 MB
EGAF50000320290 bai 5.5 MB
EGAF50000320291 bai 5.4 MB
EGAF50000320292 bai 5.6 MB
EGAF50000320293 bai 5.5 MB
EGAF50000320294 bai 5.5 MB
EGAF50000320295 bai 5.6 MB
EGAF50000320296 bai 5.5 MB
EGAF50000320297 bai 5.7 MB
EGAF50000320298 bai 5.6 MB
EGAF50000320299 bai 5.6 MB
EGAF50000320300 bai 5.6 MB
EGAF50000320301 bai 5.6 MB
EGAF50000320302 bai 5.4 MB
EGAF50000320303 bai 5.7 MB
EGAF50000320304 bai 5.6 MB
EGAF50000320305 bai 5.7 MB
EGAF50000320306 bai 5.7 MB
EGAF50000320307 bai 5.5 MB
EGAF50000320308 bai 5.6 MB
EGAF50000320309 bai 5.6 MB
EGAF50000320310 bai 5.6 MB
EGAF50000320311 bai 5.6 MB
EGAF50000320312 bai 5.7 MB
EGAF50000320313 bai 5.6 MB
EGAF50000320314 bai 5.6 MB
EGAF50000320315 bai 5.7 MB
EGAF50000320316 bai 5.6 MB
EGAF50000320317 bai 5.6 MB
EGAF50000320318 bai 5.6 MB
EGAF50000320319 bai 5.6 MB
EGAF50000320320 bai 5.6 MB
EGAF50000320321 bai 5.5 MB
EGAF50000320322 bai 5.7 MB
EGAF50000320323 bai 5.6 MB
EGAF50000320324 bai 5.7 MB
EGAF50000320325 bai 5.6 MB
EGAF50000320326 bai 5.6 MB
EGAF50000320327 bai 5.6 MB
EGAF50000320328 bai 5.7 MB
EGAF50000320329 bai 5.6 MB
EGAF50000320330 bai 5.7 MB
EGAF50000320331 bai 5.7 MB
EGAF50000320332 bai 5.7 MB
EGAF50000320333 bai 5.7 MB
EGAF50000320334 bai 5.8 MB
EGAF50000320335 bai 5.7 MB
EGAF50000320336 bai 5.7 MB
EGAF50000320337 bai 5.7 MB
EGAF50000320338 bai 5.9 MB
EGAF50000320339 bai 5.9 MB
EGAF50000320340 bai 5.1 MB
EGAF50000320341 bai 5.2 MB
EGAF50000320342 bai 5.1 MB
EGAF50000320343 bai 5.2 MB
EGAF50000320344 bai 5.8 MB
EGAF50000320345 bai 5.6 MB
EGAF50000320346 bai 5.8 MB
EGAF50000320347 bai 5.1 MB
EGAF50000320348 bai 4.8 MB
EGAF50000320349 bai 5.0 MB
EGAF50000320350 bai 5.9 MB
EGAF50000320351 bai 5.7 MB
EGAF50000320352 bai 5.9 MB
EGAF50000320353 bai 5.7 MB
EGAF50000320354 bai 5.8 MB
EGAF50000320355 bai 5.1 MB
EGAF50000320356 bai 5.2 MB
EGAF50000320357 bai 5.2 MB
EGAF50000320358 bai 5.4 MB
EGAF50000320359 bai 5.1 MB
EGAF50000320360 bai 5.4 MB
EGAF50000320361 bai 6.1 MB
EGAF50000320362 bai 6.2 MB
EGAF50000320363 bai 6.0 MB
EGAF50000320364 bai 5.2 MB
EGAF50000320365 bai 5.9 MB
EGAF50000320366 bai 5.9 MB
EGAF50000320367 bai 6.0 MB
EGAF50000320368 bai 5.9 MB
EGAF50000320369 bai 5.8 MB
EGAF50000320370 bai 6.1 MB
EGAF50000320371 bai 5.8 MB
EGAF50000320372 bai 6.0 MB
EGAF50000320373 bai 6.1 MB
EGAF50000320374 bai 6.2 MB
EGAF50000320375 bai 6.1 MB
EGAF50000320376 bai 6.2 MB
EGAF50000320377 bai 6.0 MB
EGAF50000320378 bai 6.0 MB
EGAF50000320379 bai 6.1 MB
EGAF50000320380 bai 6.3 MB
EGAF50000320381 bai 5.7 MB
EGAF50000320382 bai 5.8 MB
EGAF50000320383 bai 6.0 MB
EGAF50000320384 bai 6.2 MB
EGAF50000320385 bai 6.1 MB
EGAF50000320386 bai 6.0 MB
EGAF50000320387 bai 6.0 MB
EGAF50000320388 bai 6.0 MB
EGAF50000320389 bai 5.8 MB
EGAF50000320390 bai 6.0 MB
EGAF50000320391 bai 6.1 MB
EGAF50000320392 bai 5.8 MB
EGAF50000320393 bai 6.2 MB
EGAF50000320394 bai 6.0 MB
EGAF50000320395 bai 6.0 MB
EGAF50000320396 bai 6.1 MB
EGAF50000320397 bai 5.9 MB
EGAF50000320398 bai 6.0 MB
EGAF50000320399 bai 5.9 MB
EGAF50000320400 bai 5.9 MB
EGAF50000320401 bai 6.0 MB
EGAF50000320402 bai 5.7 MB
EGAF50000320403 bai 5.9 MB
EGAF50000320404 bai 5.9 MB
EGAF50000320405 bai 5.5 MB
EGAF50000320406 bai 5.6 MB
EGAF50000320407 bai 5.5 MB
EGAF50000320408 bai 5.2 MB
EGAF50000320409 bai 5.4 MB
EGAF50000320410 bai 5.4 MB
EGAF50000320411 bai 5.3 MB
EGAF50000320412 bai 5.5 MB
EGAF50000320413 bai 6.0 MB
EGAF50000320414 bai 5.6 MB
EGAF50000320415 bai 5.4 MB
EGAF50000320416 bai 5.3 MB
EGAF50000320417 bai 5.5 MB
EGAF50000320418 bai 5.6 MB
EGAF50000320419 bai 5.5 MB
EGAF50000320420 bai 5.9 MB
EGAF50000320421 bai 5.6 MB
EGAF50000320422 bai 6.2 MB
EGAF50000320423 bai 6.0 MB
EGAF50000320424 bai 6.0 MB
EGAF50000320425 bai 5.9 MB
EGAF50000320426 bai 6.0 MB
EGAF50000320427 bai 5.8 MB
EGAF50000320428 bai 5.7 MB
EGAF50000320429 bai 6.0 MB
EGAF50000320430 bai 6.0 MB
EGAF50000320431 bai 6.0 MB
EGAF50000320432 bai 5.9 MB
EGAF50000320433 bai 5.8 MB
EGAF50000320434 bai 6.3 MB
EGAF50000320435 bai 6.0 MB
EGAF50000320436 bai 5.8 MB
EGAF50000320437 bai 6.0 MB
EGAF50000320438 bai 5.7 MB
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EGAF50000320448 bai 5.5 MB
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EGAF50000320451 bai 5.9 MB
EGAF50000320452 bai 6.1 MB
EGAF50000320453 bai 6.0 MB
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EGAF50000320455 bai 5.9 MB
EGAF50000320456 bai 5.6 MB
EGAF50000320457 bai 5.7 MB
EGAF50000320458 bai 5.9 MB
EGAF50000320459 bai 5.2 MB
EGAF50000320460 bai 5.3 MB
EGAF50000320461 bai 6.0 MB
EGAF50000320462 bai 5.9 MB
EGAF50000320463 bai 5.9 MB
EGAF50000320464 bai 5.2 MB
EGAF50000320465 bai 5.2 MB
EGAF50000320466 bai 6.1 MB
EGAF50000320467 bai 5.3 MB
EGAF50000320468 bai 5.9 MB
EGAF50000320469 bai 5.2 MB
EGAF50000320470 bai 5.4 MB
EGAF50000320471 bai 5.7 MB
EGAF50000320472 bai 5.9 MB
EGAF50000320473 bai 6.0 MB
EGAF50000320474 bai 5.9 MB
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EGAF50000320476 bai 5.8 MB
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EGAF50000320478 bai 5.6 MB
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EGAF50000320480 bai 6.1 MB
EGAF50000320481 bai 5.8 MB
EGAF50000320482 bai 4.3 MB
EGAF50000320483 bai 6.2 MB
EGAF50000320484 bai 6.0 MB
EGAF50000320485 bai 4.9 MB
EGAF50000320486 bai 5.3 MB
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EGAF50000320489 bai 5.5 MB
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EGAF50000320491 bai 5.3 MB
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EGAF50000320493 bai 5.3 MB
EGAF50000320494 bai 5.3 MB
EGAF50000320495 bai 5.4 MB
EGAF50000320496 bai 5.3 MB
EGAF50000320497 bai 5.5 MB
EGAF50000320498 bai 5.1 MB
EGAF50000320499 bai 5.1 MB
EGAF50000320500 bai 5.7 MB
EGAF50000320501 bai 5.2 MB
EGAF50000320502 bai 5.2 MB
EGAF50000320503 bai 5.3 MB
EGAF50000320504 bai 5.3 MB
EGAF50000320505 bai 5.6 MB
EGAF50000320506 bai 5.3 MB
EGAF50000320507 bai 5.0 MB
EGAF50000320508 bai 5.4 MB
EGAF50000320509 bai 5.2 MB
EGAF50000320510 bai 5.8 MB
EGAF50000320511 bai 5.3 MB
EGAF50000320512 bai 5.5 MB
EGAF50000320513 bai 5.4 MB
EGAF50000320514 bai 5.6 MB
EGAF50000320515 bai 5.5 MB
EGAF50000320516 bai 5.3 MB
EGAF50000320517 bai 5.3 MB
EGAF50000320518 bai 5.5 MB
EGAF50000320519 bam 408.1 MB
EGAF50000320520 bam 439.0 MB
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EGAF50000321544 bam 620.8 MB
EGAF50000321545 bam 423.0 MB
EGAF50000321546 bam 588.2 MB
EGAF50000321547 bam 217.6 MB
EGAF50000321548 bam 615.5 MB
EGAF50000321549 bam 723.6 MB
EGAF50000321550 bam 631.5 MB
EGAF50000321551 bam 828.0 MB
EGAF50000321552 bam 653.7 MB
EGAF50000321553 bam 683.4 MB
EGAF50000321554 bam 745.8 MB
EGAF50000321555 bam 916.3 MB
EGAF50000321556 bam 781.2 MB
EGAF50000321557 bam 652.9 MB
EGAF50000321558 bam 517.1 MB
EGAF50000321559 bam 662.4 MB
EGAF50000321560 bam 682.3 MB
EGAF50000321561 bam 844.5 MB
EGAF50000321562 bam 651.4 MB
EGAF50000321563 bam 761.8 MB
EGAF50000321564 bam 676.9 MB
EGAF50000321565 bam 692.0 MB
EGAF50000321566 bam 506.7 MB
EGAF50000321567 bam 474.7 MB
1558 Files (411.4 GB)