Targeted next-generation sequencing of plasma samples
Targeted next-generation sequencing was performed on circulating cell-free DNA extracted from plasma samples of patients in the Neo-Pembro trial. For each patient, circulating cell-free DNA from the baseline plasma sample was extracted and sequenced using the AVENIO Expanded Kit v2.
- 14/04/2025
- 33 samples
- DAC: EGAC50000000055
- Technology: NextSeq 550
Netherlands Cancer Institute - Antoni van Leeuwenhoek (NKI-AVL) general policy
Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study. The researcher will need to sign a data access agreement with the NKI after approval.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000781 | Exome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000353923 | bam | 295.6 MB | ||
| EGAF50000353924 | bam | 496.6 MB | ||
| EGAF50000353925 | bam | 413.8 MB | ||
| EGAF50000353926 | bam | 853.6 MB | ||
| EGAF50000353927 | bam | 281.0 MB | ||
| EGAF50000353928 | bam | 737.2 MB | ||
| EGAF50000353929 | bam | 394.0 MB | ||
| EGAF50000353930 | bam | 449.2 MB | ||
| EGAF50000353931 | bam | 319.3 MB | ||
| EGAF50000353932 | bai | 1.1 MB | ||
| EGAF50000353933 | bai | 1.1 MB | ||
| EGAF50000353934 | bai | 1.1 MB | ||
| EGAF50000353935 | bai | 1.1 MB | ||
| EGAF50000353936 | bai | 1.1 MB | ||
| EGAF50000353937 | bai | 1.1 MB | ||
| EGAF50000353938 | bai | 1.1 MB | ||
| EGAF50000353939 | bai | 1.1 MB | ||
| EGAF50000353940 | bai | 1.1 MB | ||
| EGAF50000353941 | bai | 1.1 MB | ||
| EGAF50000353942 | bai | 1.1 MB | ||
| EGAF50000353943 | bam | 117.5 MB | ||
| EGAF50000353944 | bai | 1.1 MB | ||
| EGAF50000353945 | bai | 1.1 MB | ||
| EGAF50000353946 | bam | 481.0 MB | ||
| EGAF50000353947 | bai | 1.1 MB | ||
| EGAF50000353948 | bai | 1.1 MB | ||
| EGAF50000353949 | bam | 585.7 MB | ||
| EGAF50000353950 | bai | 1.1 MB | ||
| EGAF50000353951 | bam | 425.3 MB | ||
| EGAF50000353952 | bai | 1.1 MB | ||
| EGAF50000353953 | bai | 1.1 MB | ||
| EGAF50000353954 | bai | 1.1 MB | ||
| EGAF50000353955 | bai | 1.1 MB | ||
| EGAF50000353956 | bam | 638.2 MB | ||
| EGAF50000353957 | bam | 344.1 MB | ||
| EGAF50000353958 | bam | 662.9 MB | ||
| EGAF50000353959 | bam | 320.2 MB | ||
| EGAF50000353960 | bam | 642.6 MB | ||
| EGAF50000353961 | bam | 765.7 MB | ||
| EGAF50000353962 | bam | 252.1 MB | ||
| EGAF50000353963 | bam | 175.0 MB | ||
| EGAF50000353964 | bai | 1.1 MB | ||
| EGAF50000353965 | bai | 1.1 MB | ||
| EGAF50000353966 | bai | 1.1 MB | ||
| EGAF50000353967 | bai | 1.1 MB | ||
| EGAF50000353968 | bai | 1.1 MB | ||
| EGAF50000353969 | bai | 1.1 MB | ||
| EGAF50000353970 | bai | 1.1 MB | ||
| EGAF50000353971 | bai | 1.1 MB | ||
| EGAF50000353972 | bam | 564.2 MB | ||
| EGAF50000353973 | bam | 620.6 MB | ||
| EGAF50000353974 | bam | 195.6 MB | ||
| EGAF50000353975 | bam | 659.5 MB | ||
| EGAF50000353976 | bam | 716.3 MB | ||
| EGAF50000353977 | bam | 440.2 MB | ||
| EGAF50000353978 | bam | 247.4 MB | ||
| EGAF50000353979 | bam | 322.1 MB | ||
| EGAF50000353980 | bam | 244.9 MB | ||
| EGAF50000353981 | bam | 759.6 MB | ||
| EGAF50000353982 | bam | 203.3 MB | ||
| EGAF50000353983 | bam | 804.6 MB | ||
| EGAF50000353984 | bai | 1.1 MB | ||
| EGAF50000353985 | bai | 1.1 MB | ||
| EGAF50000353986 | bai | 1.1 MB | ||
| EGAF50000353987 | bai | 1.1 MB | ||
| EGAF50000353988 | bai | 1.1 MB | ||
| 66 Files (15.5 GB) | ||||