About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Whole-exome and RNA sequencing data from a uveal melanoma patient with multi-regional sampling

This dataset includes whole-exome sequencing (WES) and RNA sequencing (RNA-seq) data from a uveal melanoma patient. Tumor samples were obtained from three distinct regions, each with matched RNA-seq and WES data. Additionally, WES data from the patient’s peripheral blood mononuclear cells (PBMCs) is provided as a germline reference.

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CHUV DAC

It is required that users obtain authorization from the CHUV for accessing the controlled data. Any user requesting access to the controlled data must apply for authorization and sign a Data Transfer and Use Agreement, which is granted by the Data Access Committee (DAC). DACs review and approve or disapprove all requests from the research community for data access. Decisions to grant access are made based on whether the request conforms to program specific requirements or procedures. Any user accessing the above data must adhere to a Data Transfer and Use Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000976 Exome Sequencing
EGAS50000000977 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000354633 fastq.gz 5.9 GB
EGAF50000354634 fastq.gz 4.5 GB
EGAF50000354635 fastq.gz 6.3 GB
EGAF50000354636 fastq.gz 10.8 GB
EGAF50000354637 fastq.gz 4.4 GB
EGAF50000354638 fastq.gz 4.4 GB
EGAF50000354639 fastq.gz 4.3 GB
EGAF50000354640 fastq.gz 5.2 GB
EGAF50000354641 fastq.gz 5.7 GB
EGAF50000354642 fastq.gz 4.3 GB
EGAF50000354643 fastq.gz 4.6 GB
EGAF50000354644 fastq.gz 2.5 GB
EGAF50000354645 fastq.gz 11.5 GB
EGAF50000354646 fastq.gz 2.5 GB
14 Files (76.9 GB)