About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Common origin and somatic mutation patterns of composite lymphomas and leukemias

The dataset contains six composite lymphomas and leukemias cases (four composite B-cell lymphomas (case 1-4), and two combinations of B-cell and T-cell lymphoma (case 5+6)). Two tumor and one non-tumor (NTC) sample were sequenced from each case after library prep with NEBNext Ultra DNA Library Prep Kit, Exome capturing was done with NimbleGen SeqCap EZ Choice kit, and sequenced on a Illumina HiSeq 2000 HO and given as fastq files. WGA (Qiagen REPLI-g kit) was used for case 2 and 3. Case 1-4 were microdisected, case 5+6 were flow-sorted.

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DAC for lymphoma data from IFZ Essen, Germany

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001017 Exome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000378324 fastq 984.6 MB
EGAF50000378325 fastq 361.8 MB
EGAF50000378326 fastq 343.9 MB
EGAF50000378327 fastq 983.0 MB
EGAF50000378328 fastq 1.0 GB
EGAF50000378329 fastq 1.1 GB
EGAF50000378330 fastq 1.0 GB
EGAF50000378331 fastq 1.0 GB
EGAF50000378332 fastq 1.0 GB
EGAF50000378333 fastq 990.7 MB
EGAF50000378334 fastq 1.0 GB
EGAF50000378335 fastq 991.5 MB
EGAF50000378336 fastq 1.1 GB
EGAF50000378337 fastq 972.5 MB
EGAF50000378338 fastq 791.0 MB
EGAF50000378339 fastq 751.9 MB
EGAF50000378340 fastq 1.1 GB
EGAF50000378341 fastq 981.4 MB
EGAF50000378342 fastq 1.0 GB
EGAF50000378343 fastq 995.5 MB
EGAF50000378344 fastq 985.5 MB
EGAF50000378345 fastq 804.6 MB
EGAF50000378346 fastq 1.0 GB
EGAF50000378347 fastq 1.0 GB
EGAF50000378348 fastq 1.0 GB
EGAF50000378349 fastq 1.0 GB
EGAF50000378350 fastq 597.9 MB
EGAF50000378351 fastq 2.0 GB
EGAF50000378352 fastq 2.0 GB
EGAF50000378353 fastq 1.9 GB
EGAF50000378354 fastq 1.6 GB
EGAF50000378355 fastq 1.6 GB
EGAF50000378356 fastq 992.0 MB
EGAF50000378357 fastq 994.9 MB
EGAF50000378358 fastqc4gh 987.2 MB
EGAF50000378359 fastq 1.0 GB
EGAF50000378360 fastq 986.6 MB
EGAF50000378361 fastq 2.2 GB
EGAF50000378362 fastq 1.6 GB
EGAF50000378363 fastq 2.1 GB
EGAF50000378364 fastq 604.7 MB
EGAF50000378365 fastq 461.3 MB
EGAF50000378366 fastq 546.7 MB
EGAF50000378367 fastq 540.9 MB
EGAF50000378368 fastq 1.6 GB
EGAF50000378369 fastq 451.1 MB
EGAF50000378370 fastq 445.8 MB
EGAF50000378371 fastq 977.2 MB
EGAF50000378372 fastq 898.6 MB
EGAF50000378373 fastq 1.0 GB
EGAF50000378374 fastq 995.0 MB
EGAF50000378375 fastq 2.3 GB
EGAF50000378376 fastq 1.0 GB
EGAF50000378377 fastq 1.1 GB
EGAF50000378378 fastq 1.0 GB
EGAF50000378379 fastq 1.0 GB
EGAF50000378380 fastq 988.8 MB
EGAF50000378381 fastq 2.3 GB
EGAF50000378382 fastq 2.4 GB
EGAF50000378383 fastq 989.3 MB
EGAF50000378384 fastq 1.0 GB
EGAF50000378385 fastq 310.5 MB
EGAF50000378386 fastq 1.6 GB
EGAF50000378387 fastq 1.6 GB
EGAF50000378388 fastq 372.8 MB
EGAF50000378389 fastq 614.0 MB
EGAF50000378390 fastq 2.1 GB
EGAF50000378391 fastq 428.9 MB
EGAF50000378392 fastq 421.5 MB
EGAF50000378393 fastq 2.1 GB
EGAF50000378394 fastq 2.1 GB
EGAF50000378395 fastq 1.9 GB
EGAF50000378396 fastq 2.0 GB
EGAF50000378397 fastq 1.6 GB
EGAF50000378398 fastq 1.0 GB
EGAF50000378399 fastq 1.6 GB
EGAF50000378400 fastq 409.9 MB
EGAF50000378401 fastq 368.6 MB
EGAF50000378402 fastq 425.9 MB
EGAF50000378403 fastq 1.6 GB
EGAF50000378404 fastq 1.6 GB
EGAF50000378405 fastq 620.6 MB
EGAF50000378406 fastq 2.1 GB
EGAF50000378407 fastq 739.2 MB
EGAF50000378408 fastq 2.0 GB
EGAF50000378409 fastq 2.0 GB
EGAF50000378410 fastq 2.0 GB
EGAF50000378411 fastq 1.0 GB
EGAF50000378412 fastq 1.0 GB
EGAF50000378413 fastq 434.5 MB
EGAF50000378414 fastq 598.1 MB
EGAF50000378415 fastq 1.0 GB
EGAF50000378416 fastq 1.5 GB
EGAF50000378417 fastq 1.6 GB
EGAF50000378418 fastq 2.1 GB
EGAF50000378419 fastq 2.1 GB
EGAF50000378420 fastq 996.1 MB
EGAF50000378421 fastq 1.0 GB
EGAF50000378422 fastq 985.3 MB
EGAF50000378423 fastq 993.7 MB
EGAF50000378424 fastq 991.0 MB
EGAF50000378425 fastq 1.0 GB
EGAF50000378426 fastq 1.1 GB
EGAF50000378427 fastq 980.5 MB
EGAF50000378428 fastq 981.1 MB
EGAF50000378429 fastq 996.3 MB
EGAF50000378430 fastq 985.8 MB
EGAF50000378431 fastq 977.6 MB
EGAF50000378432 fastq 429.5 MB
EGAF50000378433 fastq 455.6 MB
EGAF50000378434 fastq 1.6 GB
EGAF50000378435 fastq 2.1 GB
EGAF50000378436 fastq 1.9 GB
EGAF50000378437 fastq 1.0 GB
EGAF50000378438 fastq 1.9 GB
EGAF50000378439 fastq 1.9 GB
EGAF50000378440 fastq 1.9 GB
EGAF50000378441 fastq 1.9 GB
EGAF50000378442 fastq 1.9 GB
EGAF50000378443 fastq 1.9 GB
EGAF50000378444 fastq 2.0 GB
EGAF50000378445 fastq 1.0 GB
EGAF50000378446 fastq 985.0 MB
EGAF50000378447 fastq 981.3 MB
EGAF50000378448 fastq 567.6 MB
EGAF50000378449 fastq 1.6 GB
EGAF50000378450 fastq 1.9 GB
EGAF50000378451 fastq 1.5 GB
EGAF50000378452 fastq 854.8 MB
EGAF50000378453 fastq 1.6 GB
EGAF50000378454 fastq 1.9 GB
EGAF50000378455 fastq 521.2 MB
EGAF50000378456 fastq 495.6 MB
EGAF50000378457 fastq 845.2 MB
EGAF50000378458 fastq 993.1 MB
EGAF50000378459 fastq 992.3 MB
EGAF50000378460 fastq 1.0 GB
EGAF50000378461 fastq 983.0 MB
EGAF50000378462 fastq 2.1 GB
EGAF50000378463 fastq 2.1 GB
EGAF50000378464 fastq 1.5 GB
EGAF50000378465 fastq 1.1 GB
EGAF50000378466 fastq 1.6 GB
EGAF50000378467 fastq 1.6 GB
EGAF50000378468 fastq 1.6 GB
EGAF50000378469 fastq 1.6 GB
EGAF50000378470 fastq 1.6 GB
EGAF50000378471 fastq 974.9 MB
EGAF50000378472 fastq 2.2 GB
EGAF50000378473 fastq 2.3 GB
EGAF50000378474 fastq 2.3 GB
EGAF50000378475 fastq 2.4 GB
EGAF50000378476 fastq 2.5 GB
EGAF50000378477 fastq 2.7 GB
EGAF50000378478 fastq 2.6 GB
EGAF50000378479 fastq 2.7 GB
EGAF50000378480 fastq 1.6 GB
EGAF50000378481 fastq 405.3 MB
EGAF50000378482 fastq 1.6 GB
EGAF50000378483 fastq 1.6 GB
EGAF50000378484 fastq 314.4 MB
EGAF50000378485 fastq 2.1 GB
EGAF50000378486 fastq 2.1 GB
EGAF50000378487 fastq 2.1 GB
EGAF50000378488 fastq 1.6 GB
EGAF50000378489 fastq 421.1 MB
EGAF50000378490 fastq 2.1 GB
EGAF50000378491 fastq 2.1 GB
EGAF50000378492 fastq 2.1 GB
EGAF50000378493 fastq 991.2 MB
EGAF50000378494 fastq 1.1 GB
EGAF50000378495 fastq 727.6 MB
EGAF50000378496 fastq 1.0 GB
EGAF50000378497 fastq 2.0 GB
EGAF50000378498 fastq 1.9 GB
EGAF50000378499 fastq 2.0 GB
EGAF50000378500 fastq 1.9 GB
EGAF50000378501 fastq 1.9 GB
EGAF50000378502 fastq 1.9 GB
EGAF50000378503 fastq 1.4 GB
EGAF50000378504 fastq 1.6 GB
EGAF50000378505 fastq 1.4 GB
EGAF50000378506 fastq 1.5 GB
EGAF50000378507 fastq 1.6 GB
EGAF50000378508 fastq 1.4 GB
EGAF50000378509 fastq 1.6 GB
EGAF50000378510 fastq 1.6 GB
EGAF50000378511 fastq 1.2 GB
EGAF50000378512 fastq 994.6 MB
EGAF50000378513 fastq 997.0 MB
EGAF50000378514 fastq 1.0 GB
EGAF50000378515 fastq 986.4 MB
EGAF50000378516 fastq 1.0 GB
EGAF50000378517 fastq 1.0 GB
EGAF50000378518 fastq 1.0 GB
EGAF50000378519 fastq 1.0 GB
EGAF50000378520 fastq 1.0 GB
EGAF50000378521 fastq 988.3 MB
198 Files (258.7 GB)