About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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circulating cell-free RNAs, CF-miRNAs, Sequencing with Qiaseq and NextSeq 550

This dataset includes small RNA sequencing data from circulating cell-free RNAs (CF-miRNAs). miRNA libraries were prepared using the Qiaseq miRNA Library Kit with adaptations for low RNA input and sequenced on the Illumina NextSeq 550 platform

Request Access

These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. After the request from the User Institution, IRCCS Istituto Romagnolo per lo Studio dei Tumori "Dino Amadori" Italian Cancer Center Data Access Committee will evaluate it and the data access will be granted only after the subscription of a Data Access Agreement form that will include the following definitions and terms and conditions. Any further details about specific project, dataset or authorization will also be included in the Data Access Agreement form.

DATA ACCESS AGREEMENT TERMS & CONDITIONS These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. After the request from the User Institution, IRST will evaluate it and the data access will be granted only after the subscription of a Data Access Agreement form that will include the following definitions and terms and conditions. Any further details about specific project, dataset or authorization will also be included in the Data Access Agreement form. Definitions Authorised Personnel: The individuals at the User Institution to whom IRST grants access to the Data. This includes the User and any other individuals for whom the User Institution subsequently requests access to the Data. Data: The managed access datasets to which the User Institution has requested access. Data Producers: IRST and the collaborators responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Research seeking to advance the understanding and state of the art of the specific field of interest. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. IRST: IRCCS Istituto Romagnolo per lo Studio dei Tumori “Dino Amadori” - IRST S.r.l. Terms and Conditions 1. The User Institution agrees to only use these Data for the purpose of the Project and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in the Project description. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agree that in handling this Data it will follow an up-to-date information technology (IT) policy that must include, at a minimum, the following items: a. Logging and auditing of Access to the Data and to the computer network; b. Password protection to computer network and/or strong data encryption; c. Virus and malware protection to computers on the computer network; d. Secure backup procedure. 5. The User Institution agrees not to attempt to identify Research Participants. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 6. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 7. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 8. The User Institution agrees, when applicable, to follow the Fort Lauderdale Guidelines (1) and the Toronto Statement (2). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 9. The User Institution agrees to follow this Publication Policy: a. User Institution intends to publish the results of their analysis of this dataset and do not consider its deposition into public databases to be the equivalent of such publications. IRST anticipates that the dataset could be useful to other qualified researchers for a variety of purposes. However, some areas of work are subject to a publication moratorium. b. User Institution respects the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. c. The publication moratorium covers any publications (including oral communications) that describe the use of the dataset. For research papers, submission for publication should not occur before 6 months after these data were first made available on the relevant hosting database, unless IRST has provided written consent to earlier submission. d. In any publications based on these data, please describe how the data can be accessed, including the name of the hosting database and its accession numbers, and acknowledge its use in a form agreed by the User Institution with IRST. 10. The User Institution recognizes that nothing in this Agreement shall operate to transfer any intellectual property rights to the Data and agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 11. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow, when applicable, the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (3) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (4). 12. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 13. The User Institution will notify IRST within 30 days of any changes or departures of Authorised Personnel. 14. The User Institution will notify IRST prior to any significant changes to the protocol for the Project. 15. The User Institution will notify IRST as soon as it becomes aware of a breach of the terms or conditions of this agreement. 16. IRST may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purposes in conformity with audit or legal requirements. 17. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than IRST. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 18. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 19. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 20. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of the laws to which the User Institution must comply and by the laws of Italy, and is subject to the exclusive jurisdiction of the courts of of the courts that will be defined by the User Institution and of the courts of Forlì (Italy). The Parties undertake to amicably settle any disputes that may arise from this agreement. In the event of disputes arising between the Parties regarding the interpretation, execution and termination of this agreement, the place of jurisdiction will be the Court of the defendant. (1)http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf (2) http://www.nature.com/nature/journal/v461/n7261/full/461168a.html (3) https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf (4) http://www.oecd.org/science/biotech/36198812.pdf

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001032 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000379928 fastq.gz 584.8 MB
EGAF50000379929 fastq.gz 584.6 MB
EGAF50000379930 fastq.gz 294.8 MB
EGAF50000379931 fastq.gz 237.7 MB
EGAF50000379932 fastq.gz 261.3 MB
EGAF50000379933 fastq.gz 315.7 MB
EGAF50000379934 fastq.gz 483.1 MB
EGAF50000379935 fastq.gz 263.8 MB
EGAF50000379936 fastq.gz 296.6 MB
EGAF50000379937 fastq.gz 468.7 MB
EGAF50000379938 fastq.gz 432.4 MB
EGAF50000379939 fastq.gz 542.7 MB
EGAF50000379940 fastq.gz 480.4 MB
EGAF50000379941 fastq.gz 407.5 MB
EGAF50000379942 fastq.gz 414.5 MB
EGAF50000379943 fastq.gz 374.9 MB
EGAF50000379944 fastq.gz 439.0 MB
EGAF50000379945 fastq.gz 451.3 MB
EGAF50000379946 fastq.gz 468.6 MB
EGAF50000379947 fastq.gz 343.5 MB
EGAF50000379948 fastq.gz 401.7 MB
EGAF50000379949 fastq.gz 310.3 MB
EGAF50000379950 fastq.gz 348.7 MB
EGAF50000379951 fastq.gz 352.6 MB
EGAF50000379952 fastq.gz 324.8 MB
EGAF50000379953 fastq.gz 311.3 MB
EGAF50000379954 fastq.gz 364.4 MB
EGAF50000379955 fastq.gz 359.5 MB
EGAF50000379956 fastq.gz 344.9 MB
EGAF50000379957 fastq.gz 507.5 MB
EGAF50000379958 fastq.gz 345.2 MB
EGAF50000379959 fastq.gz 375.2 MB
EGAF50000379960 fastq.gz 394.2 MB
EGAF50000379961 fastq.gz 406.4 MB
EGAF50000379962 fastq.gz 651.8 MB
EGAF50000379963 fastq.gz 477.0 MB
EGAF50000379964 fastq.gz 545.4 MB
EGAF50000379965 fastq.gz 594.9 MB
EGAF50000379966 fastq.gz 584.4 MB
EGAF50000379967 fastq.gz 582.0 MB
EGAF50000379968 fastq.gz 625.3 MB
EGAF50000379969 fastq.gz 584.6 MB
EGAF50000379970 fastq.gz 519.8 MB
EGAF50000379971 fastq.gz 598.6 MB
EGAF50000379972 fastq.gz 538.3 MB
EGAF50000379973 fastq.gz 630.4 MB
EGAF50000379974 fastq.gz 512.7 MB
EGAF50000379975 fastq.gz 623.3 MB
EGAF50000379976 fastq.gz 490.4 MB
EGAF50000379977 fastq.gz 497.3 MB
EGAF50000379978 fastq.gz 520.8 MB
EGAF50000379979 fastq.gz 518.4 MB
EGAF50000379980 fastq.gz 563.2 MB
EGAF50000379981 fastq.gz 659.1 MB
EGAF50000379982 fastq.gz 548.7 MB
EGAF50000379983 fastq.gz 434.3 MB
EGAF50000379984 fastq.gz 472.3 MB
EGAF50000379985 fastq.gz 494.4 MB
EGAF50000379986 fastq.gz 521.6 MB
EGAF50000379987 fastq.gz 756.9 MB
EGAF50000379988 fastq.gz 509.4 MB
EGAF50000379989 fastq.gz 538.5 MB
EGAF50000379990 fastq.gz 681.7 MB
EGAF50000379991 fastq.gz 587.5 MB
EGAF50000379992 fastq.gz 563.7 MB
EGAF50000379993 fastq.gz 684.3 MB
EGAF50000379994 fastq.gz 454.1 MB
EGAF50000379995 fastq.gz 476.4 MB
EGAF50000379996 fastq.gz 485.6 MB
EGAF50000379997 fastq.gz 548.6 MB
EGAF50000379998 fastq.gz 530.9 MB
EGAF50000379999 fastq.gz 502.0 MB
EGAF50000380000 fastq.gz 459.8 MB
EGAF50000380001 fastq.gz 513.3 MB
EGAF50000380002 fastq.gz 433.8 MB
EGAF50000380003 fastq.gz 526.3 MB
EGAF50000380004 fastq.gz 492.2 MB
EGAF50000380005 fastq.gz 564.9 MB
EGAF50000380006 fastq.gz 501.2 MB
EGAF50000380007 fastq.gz 541.3 MB
EGAF50000380008 fastq.gz 534.9 MB
EGAF50000380009 fastq.gz 588.1 MB
EGAF50000380010 fastq.gz 504.8 MB
EGAF50000380011 fastq.gz 540.8 MB
EGAF50000380012 fastq.gz 591.5 MB
EGAF50000380013 fastq.gz 582.6 MB
EGAF50000380014 fastq.gz 556.8 MB
EGAF50000380015 fastq.gz 618.0 MB
EGAF50000380016 fastq.gz 580.9 MB
EGAF50000380017 fastq.gz 582.1 MB
EGAF50000380018 fastq.gz 582.1 MB
EGAF50000380019 fastq.gz 601.9 MB
EGAF50000380020 fastq.gz 542.3 MB
EGAF50000380021 fastq.gz 676.8 MB
EGAF50000380022 fastq.gz 533.7 MB
EGAF50000380023 fastq.gz 626.6 MB
EGAF50000380024 fastq.gz 509.6 MB
EGAF50000380025 fastq.gz 627.2 MB
EGAF50000380026 fastq.gz 1.1 GB
EGAF50000380027 fastq.gz 1.1 GB
EGAF50000380028 fastq.gz 450.0 MB
EGAF50000380029 fastq.gz 1.1 GB
EGAF50000380030 fastq.gz 428.0 MB
EGAF50000380031 fastq.gz 442.6 MB
EGAF50000380032 fastq.gz 410.2 MB
EGAF50000380033 fastq.gz 451.4 MB
EGAF50000380034 fastq.gz 430.5 MB
EGAF50000380035 fastq.gz 472.2 MB
EGAF50000380036 fastq.gz 430.0 MB
EGAF50000380037 fastq.gz 394.2 MB
EGAF50000380038 fastq.gz 396.5 MB
EGAF50000380039 fastq.gz 456.7 MB
EGAF50000380040 fastq.gz 462.8 MB
EGAF50000380041 fastq.gz 511.2 MB
EGAF50000380042 fastq.gz 437.7 MB
EGAF50000380043 fastq.gz 437.9 MB
EGAF50000380044 fastq.gz 458.1 MB
EGAF50000380045 fastq.gz 445.3 MB
EGAF50000380046 fastq.gz 434.5 MB
EGAF50000380047 fastq.gz 491.1 MB
EGAF50000380048 fastq.gz 559.0 MB
EGAF50000380049 fastq.gz 484.3 MB
EGAF50000380050 fastq.gz 432.6 MB
EGAF50000380051 fastq.gz 564.6 MB
EGAF50000380052 fastq.gz 405.4 MB
EGAF50000380053 fastq.gz 449.6 MB
EGAF50000380054 fastq.gz 392.3 MB
EGAF50000380055 fastq.gz 432.9 MB
EGAF50000380056 fastq.gz 475.7 MB
EGAF50000380057 fastq.gz 409.8 MB
EGAF50000380058 fastq.gz 430.3 MB
EGAF50000380059 fastq.gz 469.6 MB
EGAF50000380060 fastq.gz 432.0 MB
EGAF50000380061 fastq.gz 473.9 MB
EGAF50000380062 fastq.gz 578.1 MB
EGAF50000380063 fastq.gz 597.4 MB
EGAF50000380064 fastq.gz 549.5 MB
EGAF50000380065 fastq.gz 468.1 MB
EGAF50000380066 fastq.gz 538.0 MB
EGAF50000380067 fastq.gz 676.3 MB
EGAF50000380068 fastq.gz 784.7 MB
EGAF50000380069 fastq.gz 871.1 MB
EGAF50000380070 fastq.gz 738.9 MB
EGAF50000380071 fastq.gz 735.9 MB
EGAF50000380072 fastq.gz 1.3 GB
EGAF50000380073 fastq.gz 571.2 MB
EGAF50000380074 fastq.gz 1.2 GB
EGAF50000380075 fastq.gz 696.5 MB
EGAF50000380076 fastq.gz 1.0 GB
EGAF50000380077 fastq.gz 1.7 GB
EGAF50000380078 fastq.gz 983.3 MB
EGAF50000380079 fastq.gz 877.3 MB
EGAF50000380080 fastq.gz 772.6 MB
EGAF50000380081 fastq.gz 690.3 MB
EGAF50000380082 fastq.gz 749.9 MB
EGAF50000380083 fastq.gz 905.6 MB
EGAF50000380084 fastq.gz 635.5 MB
EGAF50000380085 fastq.gz 443.1 MB
EGAF50000380086 fastq.gz 474.8 MB
EGAF50000380087 fastq.gz 307.3 MB
EGAF50000380088 fastq.gz 561.9 MB
EGAF50000380089 fastq.gz 551.1 MB
EGAF50000380090 fastq.gz 433.2 MB
EGAF50000380091 fastq.gz 380.7 MB
EGAF50000380092 fastq.gz 457.4 MB
EGAF50000380093 fastq.gz 479.4 MB
EGAF50000380094 fastq.gz 312.6 MB
EGAF50000380095 fastq.gz 261.9 MB
EGAF50000380096 fastq.gz 556.5 MB
EGAF50000380097 fastq.gz 607.6 MB
EGAF50000380098 fastq.gz 583.5 MB
EGAF50000380099 fastq.gz 708.3 MB
EGAF50000380100 fastq.gz 590.0 MB
EGAF50000380101 fastq.gz 440.6 MB
EGAF50000380102 fastq.gz 476.2 MB
EGAF50000380103 fastq.gz 392.0 MB
EGAF50000380104 fastq.gz 226.8 MB
EGAF50000380105 fastq.gz 295.8 MB
EGAF50000380106 fastq.gz 311.5 MB
EGAF50000380107 fastq.gz 395.0 MB
EGAF50000380108 fastq.gz 373.7 MB
EGAF50000380109 fastq.gz 931.5 MB
EGAF50000380110 fastq.gz 662.4 MB
EGAF50000380111 fastq.gz 565.9 MB
EGAF50000380112 fastq.gz 581.0 MB
EGAF50000380113 fastq.gz 636.6 MB
EGAF50000380114 fastq.gz 748.3 MB
EGAF50000380115 fastq.gz 437.9 MB
EGAF50000380116 fastq.gz 601.2 MB
EGAF50000380117 fastq.gz 564.9 MB
EGAF50000380118 fastq.gz 1.1 GB
EGAF50000380119 fastq.gz 918.5 MB
EGAF50000380120 fastq.gz 572.6 MB
EGAF50000380121 fastq.gz 901.4 MB
EGAF50000380122 fastq.gz 613.0 MB
EGAF50000380123 fastq.gz 611.2 MB
EGAF50000380124 fastq.gz 536.8 MB
EGAF50000380125 fastq.gz 630.1 MB
EGAF50000380126 fastq.gz 565.1 MB
EGAF50000380127 fastq.gz 585.1 MB
EGAF50000380128 fastq.gz 524.1 MB
EGAF50000380129 fastq.gz 446.8 MB
EGAF50000380130 fastq.gz 456.8 MB
EGAF50000380131 fastq.gz 513.8 MB
EGAF50000380132 fastq.gz 491.3 MB
EGAF50000380133 fastq.gz 445.0 MB
EGAF50000380134 fastq.gz 494.5 MB
EGAF50000380135 fastq.gz 461.5 MB
EGAF50000380136 fastq.gz 547.4 MB
EGAF50000380137 fastq.gz 582.7 MB
EGAF50000380138 fastq.gz 586.9 MB
EGAF50000380139 fastq.gz 541.0 MB
EGAF50000380140 fastq.gz 572.5 MB
EGAF50000380141 fastq.gz 457.3 MB
EGAF50000380142 fastq.gz 519.0 MB
EGAF50000380143 fastq.gz 478.2 MB
EGAF50000380144 fastq.gz 393.3 MB
EGAF50000380145 fastq.gz 462.3 MB
EGAF50000380146 fastq.gz 490.7 MB
EGAF50000380147 fastq.gz 655.4 MB
EGAF50000380148 fastq.gz 560.7 MB
EGAF50000380149 fastq.gz 664.8 MB
222 Files (120.4 GB)