About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Extracellular Vesicle miRNA Sequencing with Qiaseq and NextSeq 550

This dataset includes small RNA sequencing data from extracellular vesicle-derived RNA. miRNA libraries were prepared using the Qiaseq miRNA Library Kit with adaptations for low RNA input and sequenced on the Illumina NextSeq 550 platform

Request Access

These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. After the request from the User Institution, IRCCS Istituto Romagnolo per lo Studio dei Tumori "Dino Amadori" Italian Cancer Center Data Access Committee will evaluate it and the data access will be granted only after the subscription of a Data Access Agreement form that will include the following definitions and terms and conditions. Any further details about specific project, dataset or authorization will also be included in the Data Access Agreement form.

DATA ACCESS AGREEMENT TERMS & CONDITIONS These terms and conditions govern access to the managed access datasets to which the User Institution has requested access. After the request from the User Institution, IRST will evaluate it and the data access will be granted only after the subscription of a Data Access Agreement form that will include the following definitions and terms and conditions. Any further details about specific project, dataset or authorization will also be included in the Data Access Agreement form. Definitions Authorised Personnel: The individuals at the User Institution to whom IRST grants access to the Data. This includes the User and any other individuals for whom the User Institution subsequently requests access to the Data. Data: The managed access datasets to which the User Institution has requested access. Data Producers: IRST and the collaborators responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Research seeking to advance the understanding and state of the art of the specific field of interest. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. IRST: IRCCS Istituto Romagnolo per lo Studio dei Tumori “Dino Amadori” - IRST S.r.l. Terms and Conditions 1. The User Institution agrees to only use these Data for the purpose of the Project and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in the Project description. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agree that in handling this Data it will follow an up-to-date information technology (IT) policy that must include, at a minimum, the following items: a. Logging and auditing of Access to the Data and to the computer network; b. Password protection to computer network and/or strong data encryption; c. Virus and malware protection to computers on the computer network; d. Secure backup procedure. 5. The User Institution agrees not to attempt to identify Research Participants. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 6. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 7. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 8. The User Institution agrees, when applicable, to follow the Fort Lauderdale Guidelines (1) and the Toronto Statement (2). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 9. The User Institution agrees to follow this Publication Policy: a. User Institution intends to publish the results of their analysis of this dataset and do not consider its deposition into public databases to be the equivalent of such publications. IRST anticipates that the dataset could be useful to other qualified researchers for a variety of purposes. However, some areas of work are subject to a publication moratorium. b. User Institution respects the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. c. The publication moratorium covers any publications (including oral communications) that describe the use of the dataset. For research papers, submission for publication should not occur before 6 months after these data were first made available on the relevant hosting database, unless IRST has provided written consent to earlier submission. d. In any publications based on these data, please describe how the data can be accessed, including the name of the hosting database and its accession numbers, and acknowledge its use in a form agreed by the User Institution with IRST. 10. The User Institution recognizes that nothing in this Agreement shall operate to transfer any intellectual property rights to the Data and agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 11. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow, when applicable, the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (3) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (4). 12. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 13. The User Institution will notify IRST within 30 days of any changes or departures of Authorised Personnel. 14. The User Institution will notify IRST prior to any significant changes to the protocol for the Project. 15. The User Institution will notify IRST as soon as it becomes aware of a breach of the terms or conditions of this agreement. 16. IRST may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purposes in conformity with audit or legal requirements. 17. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than IRST. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 18. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 19. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 20. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of the laws to which the User Institution must comply and by the laws of Italy, and is subject to the exclusive jurisdiction of the courts of of the courts that will be defined by the User Institution and of the courts of Forlì (Italy). The Parties undertake to amicably settle any disputes that may arise from this agreement. In the event of disputes arising between the Parties regarding the interpretation, execution and termination of this agreement, the place of jurisdiction will be the Court of the defendant. (1)http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf (2) http://www.nature.com/nature/journal/v461/n7261/full/461168a.html (3) https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf (4) http://www.oecd.org/science/biotech/36198812.pdf

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001032 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000379706 fastq.gz 621.3 MB
EGAF50000379707 fastq.gz 205.0 MB
EGAF50000379708 fastq.gz 1.0 GB
EGAF50000379709 fastq.gz 879.3 MB
EGAF50000379710 fastq.gz 410.6 MB
EGAF50000379711 fastq.gz 619.5 MB
EGAF50000379712 fastq.gz 243.4 MB
EGAF50000379713 fastq.gz 209.5 MB
EGAF50000379714 fastq.gz 1.2 GB
EGAF50000379715 fastq.gz 1.2 GB
EGAF50000379716 fastq.gz 1.2 GB
EGAF50000379717 fastq.gz 1.6 GB
EGAF50000379718 fastq.gz 1.3 GB
EGAF50000379719 fastq.gz 1.3 GB
EGAF50000379720 fastq.gz 1.2 GB
EGAF50000379721 fastq.gz 1.2 GB
EGAF50000379722 fastq.gz 1.0 GB
EGAF50000379723 fastq.gz 967.1 MB
EGAF50000379724 fastq.gz 1.0 GB
EGAF50000379725 fastq.gz 1.1 GB
EGAF50000379726 fastq.gz 1.0 GB
EGAF50000379727 fastq.gz 1.4 GB
EGAF50000379728 fastq.gz 1.8 GB
EGAF50000379729 fastq.gz 587.9 MB
EGAF50000379730 fastq.gz 1.3 GB
EGAF50000379731 fastq.gz 1.0 GB
EGAF50000379732 fastq.gz 1.0 GB
EGAF50000379733 fastq.gz 895.6 MB
EGAF50000379734 fastq.gz 959.8 MB
EGAF50000379735 fastq.gz 950.7 MB
EGAF50000379736 fastq.gz 883.6 MB
EGAF50000379737 fastq.gz 797.0 MB
EGAF50000379738 fastq.gz 573.5 MB
EGAF50000379739 fastq.gz 662.5 MB
EGAF50000379740 fastq.gz 925.1 MB
EGAF50000379741 fastq.gz 903.8 MB
EGAF50000379742 fastq.gz 860.9 MB
EGAF50000379743 fastq.gz 1.3 GB
EGAF50000379744 fastq.gz 1.4 GB
EGAF50000379745 fastq.gz 786.2 MB
EGAF50000379746 fastq.gz 471.8 MB
EGAF50000379747 fastq.gz 1.4 GB
EGAF50000379748 fastq.gz 1.0 GB
EGAF50000379749 fastq.gz 1.3 GB
EGAF50000379750 fastq.gz 1.4 GB
EGAF50000379751 fastq.gz 945.8 MB
EGAF50000379752 fastq.gz 1.2 GB
EGAF50000379753 fastq.gz 1.1 GB
EGAF50000379754 fastq.gz 1.2 GB
EGAF50000379755 fastq.gz 1.2 GB
EGAF50000379756 fastq.gz 1.0 GB
EGAF50000379757 fastq.gz 1.1 GB
EGAF50000379758 fastq.gz 1.4 GB
EGAF50000379759 fastq.gz 1.1 GB
EGAF50000379760 fastq.gz 1.2 GB
EGAF50000379761 fastq.gz 1.3 GB
EGAF50000379762 fastq.gz 1.2 GB
EGAF50000379763 fastq.gz 937.5 MB
EGAF50000379764 fastq.gz 1.3 GB
EGAF50000379765 fastq.gz 1.1 GB
EGAF50000379766 fastq.gz 959.5 MB
EGAF50000379767 fastq.gz 1.1 GB
EGAF50000379768 fastq.gz 1.2 GB
EGAF50000379769 fastq.gz 1.2 GB
EGAF50000379770 fastq.gz 1.1 GB
EGAF50000379771 fastq.gz 1.1 GB
EGAF50000379772 fastq.gz 870.6 MB
EGAF50000379773 fastq.gz 1.1 GB
EGAF50000379774 fastq.gz 1.1 GB
EGAF50000379775 fastq.gz 1.1 GB
EGAF50000379776 fastq.gz 981.3 MB
EGAF50000379777 fastq.gz 1.2 GB
EGAF50000379778 fastq.gz 1.0 GB
EGAF50000379779 fastq.gz 814.9 MB
EGAF50000379780 fastq.gz 1.2 GB
EGAF50000379781 fastq.gz 1.3 GB
EGAF50000379782 fastq.gz 1.1 GB
EGAF50000379783 fastq.gz 1.2 GB
EGAF50000379784 fastq.gz 1.3 GB
EGAF50000379785 fastq.gz 1.1 GB
EGAF50000379786 fastq.gz 1.5 GB
EGAF50000379787 fastq.gz 1.1 GB
EGAF50000379788 fastq.gz 1.3 GB
EGAF50000379789 fastq.gz 1.2 GB
EGAF50000379790 fastq.gz 1.2 GB
EGAF50000379791 fastq.gz 1.2 GB
EGAF50000379792 fastq.gz 1.2 GB
EGAF50000379793 fastq.gz 1.3 GB
EGAF50000379794 fastq.gz 959.3 MB
EGAF50000379795 fastq.gz 1.2 GB
EGAF50000379796 fastq.gz 1.1 GB
EGAF50000379797 fastq.gz 1.3 GB
EGAF50000379798 fastq.gz 1.0 GB
EGAF50000379799 fastq.gz 987.2 MB
EGAF50000379800 fastq.gz 1.2 GB
EGAF50000379801 fastq.gz 1.2 GB
EGAF50000379802 fastq.gz 1.3 GB
EGAF50000379803 fastq.gz 1.0 GB
EGAF50000379804 fastq.gz 1.3 GB
EGAF50000379805 fastq.gz 1.2 GB
EGAF50000379806 fastq.gz 1.5 GB
EGAF50000379807 fastq.gz 1.4 GB
EGAF50000379808 fastq.gz 1.3 GB
EGAF50000379809 fastq.gz 1.2 GB
EGAF50000379810 fastq.gz 1.2 GB
EGAF50000379811 fastq.gz 1.1 GB
EGAF50000379812 fastq.gz 1.2 GB
EGAF50000379813 fastq.gz 1.3 GB
EGAF50000379814 fastq.gz 456.6 MB
EGAF50000379815 fastq.gz 774.2 MB
EGAF50000379816 fastq.gz 876.1 MB
EGAF50000379817 fastq.gz 877.9 MB
EGAF50000379818 fastq.gz 872.3 MB
EGAF50000379819 fastq.gz 1.0 GB
EGAF50000379820 fastq.gz 1.1 GB
EGAF50000379821 fastq.gz 894.1 MB
EGAF50000379822 fastq.gz 761.8 MB
EGAF50000379823 fastq.gz 838.3 MB
EGAF50000379824 fastq.gz 994.2 MB
EGAF50000379825 fastq.gz 483.7 MB
EGAF50000379826 fastq.gz 803.7 MB
EGAF50000379827 fastq.gz 730.1 MB
EGAF50000379828 fastq.gz 704.2 MB
EGAF50000379829 fastq.gz 731.9 MB
EGAF50000379830 fastq.gz 654.3 MB
EGAF50000379831 fastq.gz 627.1 MB
EGAF50000379832 fastq.gz 1.0 GB
EGAF50000379833 fastq.gz 883.3 MB
EGAF50000379834 fastq.gz 1.1 GB
EGAF50000379835 fastq.gz 1.1 GB
EGAF50000379836 fastq.gz 561.6 MB
EGAF50000379837 fastq.gz 895.4 MB
EGAF50000379838 fastq.gz 507.6 MB
EGAF50000379839 fastq.gz 1.1 GB
EGAF50000379840 fastq.gz 1.0 GB
EGAF50000379841 fastq.gz 1.3 GB
EGAF50000379842 fastq.gz 989.2 MB
EGAF50000379843 fastq.gz 1.1 GB
EGAF50000379844 fastq.gz 1.4 GB
EGAF50000379845 fastq.gz 1.5 GB
EGAF50000379846 fastq.gz 1.4 GB
EGAF50000379847 fastq.gz 421.9 MB
EGAF50000379848 fastq.gz 1.4 GB
EGAF50000379849 fastq.gz 1.5 GB
EGAF50000379850 fastq.gz 792.2 MB
EGAF50000379851 fastq.gz 1.1 GB
EGAF50000379852 fastq.gz 1.1 GB
EGAF50000379853 fastq.gz 1.3 GB
EGAF50000379854 fastq.gz 1.4 GB
EGAF50000379855 fastq.gz 1.6 GB
EGAF50000379856 fastq.gz 1.3 GB
EGAF50000379857 fastq.gz 1.3 GB
EGAF50000379858 fastq.gz 405.7 MB
EGAF50000379859 fastq.gz 781.7 MB
EGAF50000379860 fastq.gz 1.5 GB
EGAF50000379861 fastq.gz 473.9 MB
EGAF50000379862 fastq.gz 1.5 GB
EGAF50000379863 fastq.gz 1.1 GB
EGAF50000379864 fastq.gz 1.1 GB
EGAF50000379865 fastq.gz 1.3 GB
EGAF50000379866 fastq.gz 2.1 GB
EGAF50000379867 fastq.gz 1.4 GB
EGAF50000379868 fastq.gz 1.1 GB
EGAF50000379869 fastq.gz 1.2 GB
EGAF50000379870 fastq.gz 1.5 GB
EGAF50000379871 fastq.gz 1.3 GB
EGAF50000379872 fastq.gz 779.0 MB
EGAF50000379873 fastq.gz 1.7 GB
EGAF50000379874 fastq.gz 928.7 MB
EGAF50000379875 fastq.gz 776.0 MB
EGAF50000379876 fastq.gz 843.1 MB
EGAF50000379877 fastq.gz 1.2 GB
EGAF50000379878 fastq.gz 937.6 MB
EGAF50000379879 fastq.gz 811.7 MB
EGAF50000379880 fastq.gz 880.8 MB
EGAF50000379881 fastq.gz 864.7 MB
EGAF50000379882 fastq.gz 491.6 MB
EGAF50000379883 fastq.gz 458.4 MB
EGAF50000379884 fastq.gz 689.6 MB
EGAF50000379885 fastq.gz 533.3 MB
EGAF50000379886 fastq.gz 531.5 MB
EGAF50000379887 fastq.gz 593.2 MB
EGAF50000379888 fastq.gz 718.0 MB
EGAF50000379889 fastq.gz 911.9 MB
EGAF50000379890 fastq.gz 1.1 GB
EGAF50000379891 fastq.gz 904.5 MB
EGAF50000379892 fastq.gz 953.9 MB
EGAF50000379893 fastq.gz 1.2 GB
EGAF50000379894 fastq.gz 972.9 MB
EGAF50000379895 fastq.gz 901.2 MB
EGAF50000379896 fastq.gz 974.3 MB
EGAF50000379897 fastq.gz 987.7 MB
EGAF50000379898 fastq.gz 706.8 MB
EGAF50000379899 fastq.gz 684.8 MB
EGAF50000379900 fastq.gz 1.4 GB
EGAF50000379901 fastq.gz 1.3 GB
EGAF50000379902 fastq.gz 1.2 GB
EGAF50000379903 fastq.gz 1.3 GB
EGAF50000379904 fastq.gz 1.3 GB
EGAF50000379905 fastq.gz 842.7 MB
EGAF50000379906 fastq.gz 1.2 GB
EGAF50000379907 fastq.gz 1.2 GB
EGAF50000379908 fastq.gz 1.2 GB
EGAF50000379909 fastq.gz 1.3 GB
EGAF50000379910 fastq.gz 1.3 GB
EGAF50000379911 fastq.gz 1.1 GB
EGAF50000379912 fastq.gz 1.3 GB
EGAF50000379913 fastq.gz 1.1 GB
EGAF50000379914 fastq.gz 1.1 GB
EGAF50000379915 fastq.gz 1.0 GB
EGAF50000379916 fastq.gz 927.8 MB
EGAF50000379917 fastq.gz 935.2 MB
EGAF50000379918 fastq.gz 957.3 MB
EGAF50000379919 fastq.gz 914.8 MB
EGAF50000379920 fastq.gz 800.8 MB
EGAF50000379921 fastq.gz 920.0 MB
EGAF50000379922 fastq.gz 930.9 MB
EGAF50000379923 fastq.gz 489.8 MB
EGAF50000379924 fastq.gz 349.3 MB
EGAF50000379925 fastq.gz 362.4 MB
EGAF50000379926 fastq.gz 587.5 MB
EGAF50000379927 fastq.gz 268.2 MB
222 Files (228.8 GB)