Visium Spatial transcriptomics
This study consists of the spatial transcriptomics data generated by : Visium CytAssist Spatial Gene Expression for FFPE (10x) for steatotic liver disease-associated hepatocellular carcinoma (SLD-HCC) (n=7) and non-SLD-HCC (n=5) The goal of this data is to compare SLD-HCC vs non-SLD-HCC as well as response to immunotherapy
- 14/07/2025
- 12 samples
- DAC: EGAC50000000265
- Technology: Illumina NovaSeq 6000
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001034 | Transcriptome Sequencing |
- Link the dataset with the correct DAC policy
- Dataset Released
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000380268 | fastq.gz | 6.8 GB |
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| EGAF50000380269 | fastq.gz | 530.1 MB |
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| EGAF50000380270 | fastq.gz | 7.9 GB |
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| EGAF50000380271 | fastq.gz | 313.0 MB |
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| EGAF50000380272 | fastq.gz | 8.4 GB |
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| EGAF50000380273 | fastq.gz | 5.9 GB |
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| EGAF50000380274 | fastq.gz | 12.3 GB |
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| EGAF50000380275 | fastq.gz | 7.2 GB |
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| EGAF50000380276 | fastq.gz | 12.1 GB |
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| EGAF50000380277 | fastq.gz | 12.1 GB |
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| EGAF50000380278 | fastq.gz | 12.0 GB |
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| EGAF50000380279 | fastq.gz | 6.9 GB |
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| 12 Files (92.5 GB) | ||||