RNAseq data from 112 samples of benign or malignant ovarian tumours
This dataset contains ~1.2 TB RNA sequencing data in fastq format from 112 samples of fresh-frozen ovarian tumours from a total of 111 women, two samples being replicates. The samples were collected from the U-CAN collection at Uppsala Biobank and include both benign (n = 18) and malignant (n = 94) tumours. The RNA sequencing samples were sequenced using paired-end sequencing (2x150 bp) on an Illumina NovaSeq 6000 instrument at the SciLifeLab National Genomics Infrastructure (NGI) in Uppsala.
- 24/06/2025
- 112 samples
- DAC: EGAC50000000433
- Technology: Illumina NovaSeq 6000
- Archive: Federated EGA Sweden Federated EGA Node
Uppsala University Data Access Policy
By depositing data in the FEGA repository, researchers at Uppsala University aim to contribute to science and advance discoveries in biomedicine, healthcare and other fields. Deposited data in the FEGA repository is regarded as sensitive personal information. The current interpretation of Swedish laws and regulations only allows Uppsala University to approve release of datasets to researchers in Sweden that have an ethics approval from Swedish Ethical Review Authority to perform research on the requested datasets in FEGA. For researchers not affiliated to a higher education institution in Sweden it is possible, provided access is permitted, to access and analyse data using the support at Uppsala University. Analysis may be done with the help of personnel from the National Bioinformatics Infrastructure Sweden and the computational resources available at the Uppsala University supercomputing centre. Data may, however, not be transferred outside of Uppsala University.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001045 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report | |
|---|---|---|---|---|
| EGAF50000375708 | fastq.gz | 3.8 GB | ||
| EGAF50000375709 | fastq.gz | 3.9 GB | ||
| EGAF50000375710 | fastq.gz | 3.4 GB | ||
| EGAF50000375711 | fastq.gz | 3.7 GB | ||
| EGAF50000375712 | fastq.gz | 6.9 GB | ||
| EGAF50000375713 | fastq.gz | 7.3 GB | ||
| EGAF50000375714 | fastq.gz | 5.6 GB | ||
| EGAF50000375715 | fastq.gz | 5.9 GB | ||
| EGAF50000375716 | fastq.gz | 5.6 GB | ||
| EGAF50000375717 | fastq.gz | 6.1 GB | ||
| EGAF50000375718 | fastq.gz | 4.6 GB | ||
| EGAF50000375719 | fastq.gz | 4.9 GB | ||
| EGAF50000375720 | fastq.gz | 5.6 GB | ||
| EGAF50000375721 | fastq.gz | 5.9 GB | ||
| EGAF50000375722 | fastq.gz | 3.6 GB | ||
| EGAF50000375723 | fastq.gz | 3.9 GB | ||
| EGAF50000375724 | fastq.gz | 6.3 GB | ||
| EGAF50000375725 | fastq.gz | 6.6 GB | ||
| EGAF50000375726 | fastq.gz | 7.0 GB | ||
| EGAF50000375727 | fastq.gz | 7.5 GB | ||
| EGAF50000375728 | fastq.gz | 5.8 GB | ||
| EGAF50000375729 | fastq.gz | 6.2 GB | ||
| EGAF50000375730 | fastq.gz | 4.5 GB | ||
| EGAF50000375731 | fastq.gz | 4.7 GB | ||
| EGAF50000375732 | fastq.gz | 6.8 GB | ||
| EGAF50000375733 | fastq.gz | 7.1 GB | ||
| EGAF50000375734 | fastq.gz | 3.8 GB | ||
| EGAF50000375735 | fastq.gz | 4.1 GB | ||
| EGAF50000375736 | fastq.gz | 5.6 GB | ||
| EGAF50000375737 | fastq.gz | 5.9 GB | ||
| EGAF50000375738 | fastq.gz | 8.3 GB | ||
| EGAF50000375739 | fastq.gz | 8.7 GB | ||
| EGAF50000375740 | fastq.gz | 5.2 GB | ||
| EGAF50000375741 | fastq.gz | 5.5 GB | ||
| EGAF50000375742 | fastq.gz | 6.3 GB | ||
| EGAF50000375743 | fastq.gz | 6.7 GB | ||
| EGAF50000375744 | fastq.gz | 3.1 GB | ||
| EGAF50000375745 | fastq.gz | 3.3 GB | ||
| EGAF50000375746 | fastq.gz | 4.7 GB | ||
| EGAF50000375747 | fastq.gz | 5.0 GB | ||
| EGAF50000375748 | fastq.gz | 7.2 GB | ||
| EGAF50000375749 | fastq.gz | 7.6 GB | ||
| EGAF50000375750 | fastq.gz | 6.6 GB | ||
| EGAF50000375751 | fastq.gz | 7.0 GB | ||
| EGAF50000375752 | fastq.gz | 4.1 GB | ||
| EGAF50000375753 | fastq.gz | 4.4 GB | ||
| EGAF50000375754 | fastq.gz | 2.9 GB | ||
| EGAF50000375755 | fastq.gz | 3.0 GB | ||
| EGAF50000375756 | fastq.gz | 5.4 GB | ||
| EGAF50000375757 | fastq.gz | 5.7 GB | ||
| EGAF50000375758 | fastq.gz | 6.8 GB | ||
| EGAF50000375759 | fastq.gz | 6.9 GB | ||
| EGAF50000375760 | fastq.gz | 5.8 GB | ||
| EGAF50000375761 | fastq.gz | 6.1 GB | ||
| EGAF50000375762 | fastq.gz | 7.2 GB | ||
| EGAF50000375763 | fastq.gz | 7.5 GB | ||
| EGAF50000375764 | fastq.gz | 3.8 GB | ||
| EGAF50000375765 | fastq.gz | 4.1 GB | ||
| EGAF50000375766 | fastq.gz | 5.5 GB | ||
| EGAF50000375767 | fastq.gz | 5.9 GB | ||
| EGAF50000375768 | fastq.gz | 5.0 GB | ||
| EGAF50000375769 | fastq.gz | 5.3 GB | ||
| EGAF50000375770 | fastq.gz | 5.3 GB | ||
| EGAF50000375771 | fastq.gz | 5.5 GB | ||
| EGAF50000375772 | fastq.gz | 6.3 GB | ||
| EGAF50000375773 | fastq.gz | 6.8 GB | ||
| EGAF50000375774 | fastq.gz | 5.0 GB | ||
| EGAF50000375775 | fastq.gz | 5.3 GB | ||
| EGAF50000375776 | fastq.gz | 8.4 GB | ||
| EGAF50000375777 | fastq.gz | 8.9 GB | ||
| EGAF50000375778 | fastq.gz | 7.7 GB | ||
| EGAF50000375779 | fastq.gz | 8.0 GB | ||
| EGAF50000375780 | fastq.gz | 6.5 GB | ||
| EGAF50000375781 | fastq.gz | 6.9 GB | ||
| EGAF50000375782 | fastq.gz | 4.2 GB | ||
| EGAF50000375783 | fastq.gz | 4.5 GB | ||
| EGAF50000375784 | fastq.gz | 4.4 GB | ||
| EGAF50000375785 | fastq.gz | 4.7 GB | ||
| EGAF50000375786 | fastq.gz | 3.9 GB | ||
| EGAF50000375787 | fastq.gz | 4.2 GB | ||
| EGAF50000375788 | fastq.gz | 5.4 GB | ||
| EGAF50000375789 | fastq.gz | 5.8 GB | ||
| EGAF50000375790 | fastq.gz | 4.7 GB | ||
| EGAF50000375791 | fastq.gz | 5.0 GB | ||
| EGAF50000375792 | fastq.gz | 4.5 GB | ||
| EGAF50000375793 | fastq.gz | 4.7 GB | ||
| EGAF50000375794 | fastq.gz | 3.0 GB | ||
| EGAF50000375795 | fastq.gz | 3.3 GB | ||
| EGAF50000375796 | fastq.gz | 7.3 GB | ||
| EGAF50000375797 | fastq.gz | 7.7 GB | ||
| EGAF50000375798 | fastq.gz | 6.2 GB | ||
| EGAF50000375799 | fastq.gz | 6.6 GB | ||
| EGAF50000375800 | fastq.gz | 2.6 GB | ||
| EGAF50000375801 | fastq.gz | 2.8 GB | ||
| EGAF50000375802 | fastq.gz | 5.5 GB | ||
| EGAF50000375803 | fastq.gz | 5.8 GB | ||
| EGAF50000375804 | fastq.gz | 3.9 GB | ||
| EGAF50000375805 | fastq.gz | 4.1 GB | ||
| EGAF50000375806 | fastq.gz | 6.7 GB | ||
| EGAF50000375807 | fastq.gz | 7.1 GB | ||
| EGAF50000375808 | fastq.gz | 5.0 GB | ||
| EGAF50000375809 | fastq.gz | 5.3 GB | ||
| EGAF50000375810 | fastq.gz | 4.4 GB | ||
| EGAF50000375811 | fastq.gz | 4.7 GB | ||
| EGAF50000375812 | fastq.gz | 8.3 GB | ||
| EGAF50000375813 | fastq.gz | 8.8 GB | ||
| EGAF50000375814 | fastq.gz | 7.2 GB | ||
| EGAF50000375815 | fastq.gz | 7.5 GB | ||
| EGAF50000375816 | fastq.gz | 5.1 GB | ||
| EGAF50000375817 | fastq.gz | 5.4 GB | ||
| EGAF50000375818 | fastq.gz | 6.2 GB | ||
| EGAF50000375819 | fastq.gz | 6.5 GB | ||
| EGAF50000375820 | fastq.gz | 6.4 GB | ||
| EGAF50000375821 | fastq.gz | 6.8 GB | ||
| EGAF50000375822 | fastq.gz | 4.5 GB | ||
| EGAF50000375823 | fastq.gz | 4.8 GB | ||
| EGAF50000375824 | fastq.gz | 5.7 GB | ||
| EGAF50000375825 | fastq.gz | 6.0 GB | ||
| EGAF50000378134 | fastq.gz | 8.0 GB | ||
| EGAF50000378135 | fastq.gz | 8.5 GB | ||
| EGAF50000378136 | fastq.gz | 4.4 GB | ||
| EGAF50000378137 | fastq.gz | 4.7 GB | ||
| EGAF50000378138 | fastq.gz | 4.8 GB | ||
| EGAF50000378139 | fastq.gz | 5.1 GB | ||
| EGAF50000378140 | fastq.gz | 8.0 GB | ||
| EGAF50000378141 | fastq.gz | 8.5 GB | ||
| EGAF50000378142 | fastq.gz | 6.0 GB | ||
| EGAF50000378143 | fastq.gz | 6.4 GB | ||
| EGAF50000378144 | fastq.gz | 7.1 GB | ||
| EGAF50000378145 | fastq.gz | 7.5 GB | ||
| EGAF50000378146 | fastq.gz | 4.9 GB | ||
| EGAF50000378147 | fastq.gz | 5.1 GB | ||
| EGAF50000378148 | fastq.gz | 6.5 GB | ||
| EGAF50000378149 | fastq.gz | 6.9 GB | ||
| EGAF50000378150 | fastq.gz | 5.9 GB | ||
| EGAF50000378151 | fastq.gz | 6.3 GB | ||
| EGAF50000378152 | fastq.gz | 4.3 GB | ||
| EGAF50000378153 | fastq.gz | 4.5 GB | ||
| EGAF50000378154 | fastq.gz | 5.8 GB | ||
| EGAF50000378155 | fastq.gz | 6.1 GB | ||
| EGAF50000378156 | fastq.gz | 4.0 GB | ||
| EGAF50000378157 | fastq.gz | 4.3 GB | ||
| EGAF50000378158 | fastq.gz | 5.4 GB | ||
| EGAF50000378159 | fastq.gz | 5.9 GB | ||
| EGAF50000378160 | fastq.gz | 4.3 GB | ||
| EGAF50000378161 | fastq.gz | 4.5 GB | ||
| EGAF50000378162 | fastq.gz | 4.9 GB | ||
| EGAF50000378163 | fastq.gz | 5.2 GB | ||
| EGAF50000378164 | fastq.gz | 5.1 GB | ||
| EGAF50000378165 | fastq.gz | 5.4 GB | ||
| EGAF50000378166 | fastq.gz | 5.9 GB | ||
| EGAF50000378167 | fastq.gz | 6.2 GB | ||
| EGAF50000378168 | fastq.gz | 4.1 GB | ||
| EGAF50000378169 | fastq.gz | 4.3 GB | ||
| EGAF50000378170 | fastq.gz | 6.5 GB | ||
| EGAF50000378171 | fastq.gz | 6.9 GB | ||
| EGAF50000378172 | fastq.gz | 7.8 GB | ||
| EGAF50000378173 | fastq.gz | 8.3 GB | ||
| EGAF50000378174 | fastq.gz | 4.3 GB | ||
| EGAF50000378175 | fastq.gz | 4.6 GB | ||
| EGAF50000378176 | fastq.gz | 5.8 GB | ||
| EGAF50000378177 | fastq.gz | 6.3 GB | ||
| EGAF50000378178 | fastq.gz | 6.8 GB | ||
| EGAF50000378179 | fastq.gz | 7.2 GB | ||
| EGAF50000378180 | fastq.gz | 3.9 GB | ||
| EGAF50000378181 | fastq.gz | 4.1 GB | ||
| EGAF50000378182 | fastq.gz | 4.3 GB | ||
| EGAF50000378183 | fastq.gz | 4.5 GB | ||
| EGAF50000378184 | fastq.gz | 3.9 GB | ||
| EGAF50000378185 | fastq.gz | 4.2 GB | ||
| EGAF50000378186 | fastq.gz | 4.5 GB | ||
| EGAF50000378187 | fastq.gz | 4.8 GB | ||
| EGAF50000378188 | fastq.gz | 4.8 GB | ||
| EGAF50000378189 | fastq.gz | 5.1 GB | ||
| EGAF50000378190 | fastq.gz | 5.3 GB | ||
| EGAF50000378191 | fastq.gz | 5.6 GB | ||
| EGAF50000378192 | fastq.gz | 4.4 GB | ||
| EGAF50000378193 | fastq.gz | 4.7 GB | ||
| EGAF50000378194 | fastq.gz | 6.2 GB | ||
| EGAF50000378195 | fastq.gz | 6.5 GB | ||
| EGAF50000378196 | fastq.gz | 6.2 GB | ||
| EGAF50000378197 | fastq.gz | 6.7 GB | ||
| EGAF50000378198 | fastq.gz | 6.2 GB | ||
| EGAF50000378199 | fastq.gz | 6.7 GB | ||
| EGAF50000378200 | fastq.gz | 4.7 GB | ||
| EGAF50000378201 | fastq.gz | 5.0 GB | ||
| EGAF50000378202 | fastq.gz | 4.9 GB | ||
| EGAF50000378203 | fastq.gz | 5.2 GB | ||
| EGAF50000378204 | fastq.gz | 4.4 GB | ||
| EGAF50000378205 | fastq.gz | 4.6 GB | ||
| EGAF50000378206 | fastq.gz | 4.8 GB | ||
| EGAF50000378207 | fastq.gz | 5.0 GB | ||
| EGAF50000378208 | fastq.gz | 5.6 GB | ||
| EGAF50000378209 | fastq.gz | 6.0 GB | ||
| EGAF50000378210 | fastq.gz | 6.1 GB | ||
| EGAF50000378211 | fastq.gz | 6.5 GB | ||
| EGAF50000378212 | fastq.gz | 3.9 GB | ||
| EGAF50000378213 | fastq.gz | 4.1 GB | ||
| EGAF50000378214 | fastq.gz | 5.9 GB | ||
| EGAF50000378215 | fastq.gz | 6.2 GB | ||
| EGAF50000378216 | fastq.gz | 4.3 GB | ||
| EGAF50000378217 | fastq.gz | 4.6 GB | ||
| EGAF50000378218 | fastq.gz | 5.0 GB | ||
| EGAF50000378219 | fastq.gz | 5.3 GB | ||
| EGAF50000378220 | fastq.gz | 7.5 GB | ||
| EGAF50000378221 | fastq.gz | 7.8 GB | ||
| EGAF50000378222 | fastq.gz | 6.6 GB | ||
| EGAF50000378223 | fastq.gz | 6.9 GB | ||
| EGAF50000378224 | fastq.gz | 10.7 GB | ||
| EGAF50000378225 | fastq.gz | 11.2 GB | ||
| EGAF50000378226 | fastq.gz | 6.0 GB | ||
| EGAF50000378227 | fastq.gz | 6.3 GB | ||
| EGAF50000378228 | fastq.gz | 7.5 GB | ||
| EGAF50000378229 | fastq.gz | 8.0 GB | ||
| EGAF50000378230 | fastq.gz | 382.6 MB | ||
| EGAF50000378231 | fastq.gz | 404.2 MB | ||
| EGAF50000378232 | fastq.gz | 6.6 GB | ||
| EGAF50000378233 | fastq.gz | 7.0 GB | ||
| EGAF50000378234 | fastq.gz | 5.3 GB | ||
| EGAF50000378235 | fastq.gz | 5.5 GB | ||
| EGAF50000378236 | fastq.gz | 7.9 GB | ||
| EGAF50000378237 | fastq.gz | 8.4 GB | ||
| EGAF50000378238 | fastq.gz | 6.1 GB | ||
| EGAF50000378239 | fastq.gz | 6.5 GB | ||
| 224 Files (1.3 TB) | ||||